Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

A1CF


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
29974 APOBEC1 complementation factor chr10 -52644935 - 52650435 52645435

Transcription Factor Binding Sites

 
Download all TFBS in the A1CF promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 52642613 52642629 8.0E-06 TTTTTAAAAGACAGTTA 17
CEBPB_bZIP_full_dimeric_10_1 SELEX + 52642564 52642573 1.0E-05 ATTGTGCAAT 10
CEBPB_bZIP_full_dimeric_10_1 SELEX - 52642564 52642573 9.0E-06 ATTGCACAAT 10
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 52645480 52645494 1.0E-06 AGTTAAACTTTAACT 15
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 52645480 52645494 1.0E-06 AGTTAAAGTTTAACT 15
HNF1B_homeodomain_full_dimeric_13_1 SELEX + 52645481 52645493 4.0E-06 GTTAAACTTTAAC 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 52645481 52645493 4.0E-06 GTTAAAGTTTAAC 13
EN1_homeodomain_full_dimeric_14_1 SELEX + 52645533 52645546 4.0E-06 TAATTGGGTCACTA 14
EN1_homeodomain_full_dimeric_14_1 SELEX - 52645533 52645546 6.0E-06 TAGTGACCCAATTA 14
CEBPE_bZIP_DBD_dimeric_10_1 SELEX - 52642564 52642573 7.0E-06 ATTGCACAAT 10
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 52645480 52645494 2.0E-06 AGTTAAACTTTAACT 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 52645480 52645494 2.0E-06 AGTTAAAGTTTAACT 15
RORA_2_MA0072.1 JASPAR + 52645531 52645544 2.0E-06 GATAATTGGGTCAC 14
HNF1A_MA0046.1 JASPAR + 52645480 52645493 5.0E-06 AGTTAAACTTTAAC 14
HNF1A_MA0046.1 JASPAR - 52645481 52645494 3.0E-06 AGTTAAAGTTTAAC 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 52642454 52642467 4.0E-06 AGAAACAGTAACCA 14
V_SOX14_05_M02902 TRANSFAC - 52642559 52642573 4.0E-06 ATTGCACAATGGTTT 15
V_SOX30_03_M02804 TRANSFAC - 52642558 52642573 9.0E-06 ATTGCACAATGGTTTT 16
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 52642611 52642622 1.0E-06 AATTTTTAAAAG 12
V_RORA_Q4_M01138 TRANSFAC + 52645533 52645543 1.0E-06 TAATTGGGTCA 11
V_RP58_01_M00532 TRANSFAC - 52642398 52642409 6.0E-06 AAAGCATCTGGA 12
V_PPAR_DR1_Q2_M00763 TRANSFAC + 52645518 52645530 6.0E-06 AGCCCTTTGACCA 13
V_CDX_Q5_M00991 TRANSFAC + 52642542 52642559 7.0E-06 GACACATAAGGTAATGAA 18
V_HNF1_C_M00206 TRANSFAC - 52645478 52645494 3.0E-06 AGTTAAAGTTTAACTCC 17
V_HNF1_C_M00206 TRANSFAC + 52645480 52645496 3.0E-06 AGTTAAACTTTAACTCA 17
V_AP1_Q6_M00174 TRANSFAC - 52642526 52642536 2.0E-06 AATGACTCAAT 11
V_SOX7_03_M02807 TRANSFAC - 52642555 52642576 6.0E-06 ACTATTGCACAATGGTTTTCAT 22
V_AP1_Q6_01_M00925 TRANSFAC - 52642527 52642535 2.0E-06 ATGACTCAA 9
V_HNF1_Q6_01_M01011 TRANSFAC + 52645477 52645497 7.0E-06 GGGAGTTAAACTTTAACTCAC 21
V_ATF1_04_M02842 TRANSFAC - 52645418 52645431 2.0E-06 ATATGACGATTAGA 14
V_MAF_Q6_01_M00983 TRANSFAC + 52642525 52642535 8.0E-06 TATTGAGTCAT 11
V_ZFP105_04_M02931 TRANSFAC - 52642519 52642535 1.0E-06 ATGACTCAATAAGTTCA 17
V_AP1_Q4_01_M00926 TRANSFAC + 52642528 52642535 1.0E-05 TGAGTCAT 8
V_HAND1E47_01_M00222 TRANSFAC - 52642395 52642410 4.0E-06 AAAAGCATCTGGAAAA 16
V_HNF1_01_M00132 TRANSFAC + 52645480 52645494 6.0E-06 AGTTAAACTTTAACT 15
V_HNF1_01_M00132 TRANSFAC - 52645480 52645494 2.0E-06 AGTTAAAGTTTAACT 15
V_FRA1_Q5_M01267 TRANSFAC + 52642528 52642535 1.0E-05 TGAGTCAT 8
V_CEBPB_Q6_M01896 TRANSFAC + 52642565 52642574 1.0E-06 TTGTGCAATA 10
V_HOXB3_01_M01330 TRANSFAC - 52645527 52645543 1.0E-05 TGACCCAATTATCTGGT 17
V_PPARG_02_M00515 TRANSFAC + 52645534 52645556 2.0E-06 AATTGGGTCACTACAGCCCAGAT 23
V_TCF11MAFG_01_M00284 TRANSFAC - 52642519 52642540 3.0E-06 CTAAAATGACTCAATAAGTTCA 22
V_HNF1A_01_M02162 TRANSFAC + 52645480 52645493 5.0E-06 AGTTAAACTTTAAC 14
V_HNF1A_01_M02162 TRANSFAC - 52645481 52645494 3.0E-06 AGTTAAAGTTTAAC 14
V_CEBPE_01_M01772 TRANSFAC + 52642564 52642573 4.0E-06 ATTGTGCAAT 10
V_AR_Q2_M00447 TRANSFAC + 52642574 52642588 7.0E-06 AGTACCCACAGTACT 15
V_RORA2_01_M00157 TRANSFAC + 52645532 52645544 1.0E-06 ATAATTGGGTCAC 13
V_TCF11_01_M00285 TRANSFAC + 52642531 52642543 8.0E-06 GTCATTTTAGAGA 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL