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NPC1L1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29881 NPC1-like 1 chr7 - 44580414 - 44585914 44580914 Transcription Factor Binding Sites   Download all TFBS in the NPC1L1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX - 44583880 44583890 3.0E-06 CATGACTCACC 11 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 44582971 44582984 8.0E-06 AGAAACTTATTTAT 14 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 44583396 44583407 5.0E-06 AGTCGTAAACAT 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 4.0E-06 TGCCAGGTGTCA 12 FOXF2_MA0030.1 JASPAR - 44583079 44583092 1.0E-06 GAATGGTAAACATT 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 44583081 44583097 0.0E+00 AAAAAGAATGGTAAACA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 44583961 44583977 1.0E-06 ATAAATGAGTGAAAACA 17 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 44582831 44582839 2.0E-06 AAAAGTCAA 9 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 44582987 44582995 7.0E-06 AGAAGTCAA 9 Tp53_p53l_DBD_dimeric_18_2 SELEX + 44583885 44583902 6.0E-06 GTCATGTACAGACAAGCC 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 44583885 44583902 9.0E-06 GGCTTGTCTGTACATGAC 18 FOXD1_MA0031.1 JASPAR - 44583080 44583087 7.0E-06 GTAAACAT 8 FOXD1_MA0031.1 JASPAR - 44583396 44583403 7.0E-06 GTAAACAT 8 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 3.0E-06 TGCCAGGTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 7.0E-06 TGCCAGGTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 6.0E-06 TGCCAGGTGTCA 12 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX - 44583396 44583407 4.0E-06 AGTCGTAAACAT 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 44583856 44583867 2.0E-06 TGCCAGGTGTCA 12 JDP2_bZIP_full_dimeric_9_1 SELEX - 44583881 44583889 7.0E-06 ATGACTCAC 9 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 7.0E-06 TGCCAGGTGTCA 12 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 44583397 44583407 4.0E-06 AGTCGTAAACA 11 TP53_MA0106.1 JASPAR - 44583886 44583905 7.0E-06 CAGGGCTTGTCTGTACATGA 20 ELF5_MA0136.1 JASPAR + 44583030 44583038 2.0E-06 TATTTCCTT 9 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 44583397 44583407 5.0E-06 AGTCGTAAACA 11 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 44583856 44583867 5.0E-06 TGCCAGGTGTCA 12 HNF1A_MA0046.1 JASPAR + 44581002 44581015 3.0E-06 GGTTAATGATCCAC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 44582971 44582984 1.0E-05 ATAAATAAGTTTCT 14 V_HOXA9_01_M01351 TRANSFAC - 44583022 44583038 4.0E-06 AAGGAAATAAATTCAAA 17 V_MEQ_01_M02049 TRANSFAC + 44580920 44580928 2.0E-06 AACACACAT 9 V_MEQ_01_M02049 TRANSFAC - 44583958 44583966 4.0E-06 AAAACACAT 9 V_FREAC7_01_M00293 TRANSFAC + 44582966 44582981 4.0E-06 TTTTGATAAATAAGTT 16 V_BACH2_01_M00490 TRANSFAC + 44583880 44583890 3.0E-06 GGTGAGTCATG 11 V_BCL6_01_M01183 TRANSFAC + 44583019 44583034 7.0E-06 TTCTTTGAATTTATTT 16 V_SPDEF_04_M02915 TRANSFAC - 44583441 44583456 1.0E-05 CAATAAATCCTAGATT 16 V_FOXO3A_Q1_M01137 TRANSFAC + 44582970 44582981 7.0E-06 GATAAATAAGTT 12 V_P53_DECAMER_Q2_M00761 TRANSFAC + 44583894 44583903 4.0E-06 AGACAAGCCC 10 V_AP2_Q6_01_M00915 TRANSFAC + 44580685 44580697 4.0E-06 CAGCCCGCAGGCC 13 V_PAX_Q6_M00808 TRANSFAC + 44580794 44580804 2.0E-06 CTGGGACTCAC 11 V_BARBIE_01_M00238 TRANSFAC - 44583014 44583028 7.0E-06 ATTCAAAGAAGGAGG 15 V_BACH1_01_M00495 TRANSFAC + 44583878 44583892 5.0E-06 CAGGTGAGTCATGTA 15 V_HELIOSA_02_M01004 TRANSFAC - 44583030 44583040 1.0E-05 TTAAGGAAATA 11 V_HNF1_Q6_M00790 TRANSFAC + 44581001 44581018 2.0E-06 TGGTTAATGATCCACCAC 18 V_P53_03_M01651 TRANSFAC + 44583884 44583903 1.0E-06 AGTCATGTACAGACAAGCCC 20 V_P53_03_M01651 TRANSFAC - 44583884 44583903 1.0E-06 GGGCTTGTCTGTACATGACT 20 V_HOXD12_01_M01380 TRANSFAC - 44583394 44583410 2.0E-06 AAGAGTCGTAAACATTG 17 V_EVI1_01_M00078 TRANSFAC - 44582826 44582841 7.0E-06 TGAAAAGTCAAGAGAA 16 V_STAT5A_02_M00460 TRANSFAC + 44583019 44583042 2.0E-06 TTCTTTGAATTTATTTCCTTAAAA 24 V_HOXC11_01_M01329 TRANSFAC - 44583395 44583410 2.0E-06 AAGAGTCGTAAACATT 16 V_HOXD11_01_M01434 TRANSFAC - 44583394 44583410 2.0E-06 AAGAGTCGTAAACATTG 17 V_ELF5_01_M01197 TRANSFAC - 44583030 44583040 1.0E-06 TTAAGGAAATA 11 V_HOXC12_01_M01437 TRANSFAC - 44583394 44583410 2.0E-06 AAGAGTCGTAAACATTG 17 V_HOXA11_01_M01378 TRANSFAC - 44583395 44583410 2.0E-06 AAGAGTCGTAAACATT 16 V_FREAC2_01_M00290 TRANSFAC - 44583077 44583092 4.0E-06 GAATGGTAAACATTGT 16 V_AP1_Q4_01_M00926 TRANSFAC + 44583882 44583889 1.0E-05 TGAGTCAT 8 V_HNF1_01_M00132 TRANSFAC + 44581002 44581016 5.0E-06 GGTTAATGATCCACC 15 V_FOXL1_04_M02753 TRANSFAC - 44583076 44583092 1.0E-05 GAATGGTAAACATTGTA 17 V_AIRE_01_M00999 TRANSFAC + 44583438 44583463 2.0E-06 GCTAATCTAGGATTTATTGGGTAATT 26 V_FRA1_Q5_M01267 TRANSFAC + 44583882 44583889 1.0E-05 TGAGTCAT 8 V_P53_05_M01655 TRANSFAC + 44583884 44583903 8.0E-06 AGTCATGTACAGACAAGCCC 20 V_P53_05_M01655 TRANSFAC - 44583884 44583903 9.0E-06 GGGCTTGTCTGTACATGACT 20 V_P53_04_M01652 TRANSFAC + 44583884 44583903 2.0E-06 AGTCATGTACAGACAAGCCC 20 V_P53_04_M01652 TRANSFAC - 44583884 44583903 6.0E-06 GGGCTTGTCTGTACATGACT 20 V_PLZF_02_M01075 TRANSFAC + 44582960 44582988 1.0E-06 GTTCATTTTTGATAAATAAGTTTCTGGTT 29 V_BBX_03_M02739 TRANSFAC - 44583016 44583030 8.0E-06 AAATTCAAAGAAGGA 15 V_LEF1TCF1_Q4_M00978 TRANSFAC + 44583835 44583845 3.0E-06 CCTTTGTTGCT 11 V_P63_01_M01656 TRANSFAC + 44583884 44583903 6.0E-06 AGTCATGTACAGACAAGCCC 20 V_SOX4_01_M01308 TRANSFAC - 44583835 44583842 1.0E-05 AACAAAGG 8 V_IPF1_Q4_01_M01013 TRANSFAC - 44581000 44581014 1.0E-05 TGGATCATTAACCAG 15 V_SOX1_03_M02802 TRANSFAC - 44583018 44583033 4.0E-06 AATAAATTCAAAGAAG 16 V_HOXC10_01_M01361 TRANSFAC - 44583395 44583410 2.0E-06 AAGAGTCGTAAACATT 16 V_ELF5_04_M02241 TRANSFAC + 44583030 44583038 2.0E-06 TATTTCCTT 9 V_HOXA10_01_M01464 TRANSFAC - 44583023 44583038 5.0E-06 AAGGAAATAAATTCAA 16 V_HNF1A_01_M02162 TRANSFAC + 44581002 44581015 3.0E-06 GGTTAATGATCCAC 14 V_DMRT1_01_M01146 TRANSFAC - 44583002 44583016 3.0E-06 AGGAAACATTGTTAG 15 V_FOXK1_03_M02752 TRANSFAC - 44583076 44583092 7.0E-06 GAATGGTAAACATTGTA 17 V_PAX4_04_M00380 TRANSFAC - 44583077 44583106 1.0E-05 AAAAAAAAAAAAAAGAATGGTAAACATTGT 30 V_PAX6_01_M00097 TRANSFAC + 44582976 44582996 7.0E-06 TAAGTTTCTGGTTGACTTCTT 21 V_NANOG_02_M01247 TRANSFAC - 44583082 44583101 1.0E-06 AAAAAAAAAGAATGGTAAAC 20 V_HOXC9_01_M01416 TRANSFAC - 44581000 44581015 6.0E-06 GTGGATCATTAACCAG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.