Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GUCY2F Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2986 guanylate cyclase 2F, retinal chrX - 108724785 - 108730285 108725285 Transcription Factor Binding Sites   Download all TFBS in the GUCY2F promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 108729196 108729213 2.0E-06 GATGTCAATATTTTAACA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 108729196 108729213 1.0E-06 TGTTAAAATATTGACATC 18 CTCF_MA0139.1 JASPAR - 108729125 108729143 6.0E-06 TGACTACTAGAGGGCAGCA 19 TEF_bZIP_DBD_dimeric_12_1 SELEX + 108728232 108728243 4.0E-06 CCTTACATAATA 12 TBP_MA0108.2 JASPAR + 108728300 108728314 1.0E-05 GTATAAAAATGATTC 15 HLF_bZIP_full_dimeric_12_1 SELEX + 108728232 108728243 2.0E-06 CCTTACATAATA 12 NFIL3_MA0025.1 JASPAR - 108728231 108728241 6.0E-06 TTATGTAAGGC 11 NFIL3_MA0025.1 JASPAR + 108728234 108728244 8.0E-06 TTACATAATAT 11 DBP_bZIP_full_dimeric_12_1 SELEX + 108728232 108728243 7.0E-06 CCTTACATAATA 12 DBP_bZIP_full_dimeric_12_1 SELEX - 108728232 108728243 6.0E-06 TATTATGTAAGG 12 Pax4_MA0068.1 JASPAR + 108729201 108729230 6.0E-06 CAATATTTTAACATTATTATCAAACTCCTC 30 Pax4_MA0068.1 JASPAR + 108729202 108729231 1.0E-06 AATATTTTAACATTATTATCAAACTCCTCT 30 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 108729198 108729211 6.0E-06 TTAAAATATTGACA 14 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 108729174 108729187 7.0E-06 TAATGACACCACGC 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 108729198 108729211 4.0E-06 TGTCAATATTTTAA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 108729198 108729211 4.0E-06 TTAAAATATTGACA 14 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 108729240 108729256 8.0E-06 TTTTTTTTAGAAATTAA 17 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 108728232 108728243 2.0E-06 CCTTACATAATA 12 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 108729198 108729211 5.0E-06 TGTCAATATTTTAA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 108729198 108729211 4.0E-06 TTAAAATATTGACA 14 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 108728206 108728222 1.0E-05 ATGATGTATGTAATTAG 17 VDR_nuclearreceptor_full_dimeric_16_1 SELEX - 108729106 108729121 7.0E-06 AGGTTTATTCGGGTCA 16 V_STAT5A_Q6_M01890 TRANSFAC - 108729243 108729255 7.0E-06 TAATTTCTAAAAA 13 V_DBX1_01_M01483 TRANSFAC - 108729243 108729259 4.0E-06 GTATTAATTTCTAAAAA 17 V_SOX40_04_M02908 TRANSFAC + 108729209 108729224 8.0E-06 TAACATTATTATCAAA 16 V_SRY_07_M02813 TRANSFAC + 108729209 108729224 6.0E-06 TAACATTATTATCAAA 16 V_SRY_07_M02813 TRANSFAC - 108729209 108729224 2.0E-06 TTTGATAATAATGTTA 16 V_BCL6B_03_M02740 TRANSFAC + 108729241 108729256 5.0E-06 TTTTTTTAGAAATTAA 16 V_HMGIY_Q3_M01010 TRANSFAC + 108729233 108729247 1.0E-06 AGATCAATTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 108729204 108729218 8.0E-06 AATAATGTTAAAATA 15 V_MMEF2_Q6_M00405 TRANSFAC + 108728298 108728313 1.0E-06 AGGTATAAAAATGATT 16 V_MMEF2_Q6_M00405 TRANSFAC - 108729238 108729253 2.0E-06 ATTTCTAAAAAAAATT 16 V_HOXC6_01_M01406 TRANSFAC - 108729244 108729260 3.0E-06 CGTATTAATTTCTAAAA 17 V_SOX21_03_M02803 TRANSFAC + 108729209 108729224 4.0E-06 TAACATTATTATCAAA 16 V_SOX21_03_M02803 TRANSFAC - 108729209 108729224 2.0E-06 TTTGATAATAATGTTA 16 V_TCFAP2E_04_M02926 TRANSFAC - 108729238 108729251 1.0E-06 TTCTAAAAAAAATT 14 V_MEF2A_Q6_M02024 TRANSFAC + 108729204 108729213 7.0E-06 TATTTTAACA 10 V_ELF4_04_M02850 TRANSFAC - 108729234 108729250 8.0E-06 TCTAAAAAAAATTGATC 17 V_ELF4_04_M02850 TRANSFAC - 108729236 108729252 0.0E+00 TTTCTAAAAAAAATTGA 17 V_ELF4_04_M02850 TRANSFAC - 108729237 108729253 4.0E-06 ATTTCTAAAAAAAATTG 17 V_TST1_01_M00133 TRANSFAC + 108728297 108728311 7.0E-06 GAGGTATAAAAATGA 15 V_SOX13_03_M02797 TRANSFAC + 108729230 108729245 6.0E-06 CTAAGATCAATTTTTT 16 V_IPF1_Q4_M00436 TRANSFAC + 108729170 108729181 6.0E-06 GTTGTAATGACA 12 V_DBP_Q6_01_M01872 TRANSFAC - 108728234 108728241 5.0E-06 TTATGTAA 8 V_ZFP105_03_M02827 TRANSFAC - 108729237 108729251 1.0E-05 TTCTAAAAAAAATTG 15 V_OCT1_03_M00137 TRANSFAC - 108729211 108729223 2.0E-06 TTGATAATAATGT 13 V_E4BP4_01_M00045 TRANSFAC - 108728232 108728243 2.0E-06 TATTATGTAAGG 12 V_ARID5A_03_M02736 TRANSFAC - 108728234 108728247 6.0E-06 CTAATATTATGTAA 14 V_ARID5A_03_M02736 TRANSFAC - 108729196 108729209 9.0E-06 AAAATATTGACATC 14 V_TATA_01_M00252 TRANSFAC + 108728300 108728314 1.0E-05 GTATAAAAATGATTC 15 V_AMEF2_Q6_M00403 TRANSFAC + 108728298 108728315 0.0E+00 AGGTATAAAAATGATTCA 18 V_AMEF2_Q6_M00403 TRANSFAC - 108729236 108729253 9.0E-06 ATTTCTAAAAAAAATTGA 18 V_SOX18_03_M02801 TRANSFAC + 108729209 108729224 3.0E-06 TAACATTATTATCAAA 16 V_OCT1_04_M00138 TRANSFAC - 108729200 108729222 0.0E+00 TGATAATAATGTTAAAATATTGA 23 V_CTCF_01_M01200 TRANSFAC - 108729125 108729144 8.0E-06 CTGACTACTAGAGGGCAGCA 20 V_VBP_01_M00228 TRANSFAC + 108728233 108728242 5.0E-06 CTTACATAAT 10 V_HOXB7_01_M01396 TRANSFAC - 108729244 108729259 1.0E-05 GTATTAATTTCTAAAA 16 V_HOXA7_02_M01336 TRANSFAC - 108729244 108729260 1.0E-05 CGTATTAATTTCTAAAA 17 V_RARA_04_M02891 TRANSFAC - 108729102 108729117 6.0E-06 TTATTCGGGTCACGTT 16 V_MTF1_06_M02882 TRANSFAC - 108729241 108729254 9.0E-06 AATTTCTAAAAAAA 14 V_FOXL1_02_M02857 TRANSFAC + 108729203 108729218 7.0E-06 ATATTTTAACATTATT 16 V_NANOG_01_M01123 TRANSFAC - 108728224 108728235 4.0E-06 AAGGCCATTTCC 12 V_TCF7_04_M02921 TRANSFAC + 108729241 108729255 2.0E-06 TTTTTTTAGAAATTA 15 V_PLZF_02_M01075 TRANSFAC - 108729194 108729222 1.0E-06 TGATAATAATGTTAAAATATTGACATCTT 29 V_SIX4_01_M01374 TRANSFAC + 108729172 108729188 7.0E-06 TGTAATGACACCACGCG 17 V_HOXC5_01_M01454 TRANSFAC - 108729244 108729260 9.0E-06 CGTATTAATTTCTAAAA 17 V_SRF_06_M02916 TRANSFAC - 108729236 108729252 8.0E-06 TTTCTAAAAAAAATTGA 17 V_SRF_06_M02916 TRANSFAC - 108729237 108729253 9.0E-06 ATTTCTAAAAAAAATTG 17 V_HNF1A_Q5_M02013 TRANSFAC + 108728331 108728341 3.0E-06 AGTTAATCATC 11 V_SATB1_01_M01232 TRANSFAC + 108729244 108729255 4.0E-06 TTTTAGAAATTA 12 V_PIT1_Q6_M00802 TRANSFAC - 108728297 108728314 9.0E-06 GAATCATTTTTATACCTC 18 V_HOXA7_03_M01394 TRANSFAC - 108729244 108729259 4.0E-06 GTATTAATTTCTAAAA 16 V_CEBP_Q2_01_M00912 TRANSFAC + 108728233 108728244 6.0E-06 CTTACATAATAT 12 V_TCF3_05_M02920 TRANSFAC - 108729238 108729252 1.0E-06 TTTCTAAAAAAAATT 15 V_GLIS2_04_M02863 TRANSFAC + 108729213 108729226 4.0E-06 ATTATTATCAAACT 14 V_NR2F2_04_M02887 TRANSFAC - 108729102 108729117 3.0E-06 TTATTCGGGTCACGTT 16 V_SOX14_03_M02798 TRANSFAC - 108729209 108729224 6.0E-06 TTTGATAATAATGTTA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.