Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZDHHC8 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29801 zinc finger, DHHC-type containing 8 chr22 + 20114363 - 20119863 20119363 Transcription Factor Binding Sites   Download all TFBS in the ZDHHC8 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 20116975 20116986 9.0E-06 TGTTGACACTGC 12 HES5_bHLH_DBD_dimeric_12_1 SELEX + 20120055 20120066 7.0E-06 TGCCACGTGCCT 12 NFIA_NFI_full_dimeric_15_1 SELEX + 20122966 20122980 3.0E-06 CTGGCAGGCTGCCAG 15 NFIA_NFI_full_dimeric_15_1 SELEX - 20122966 20122980 3.0E-06 CTGGCAGCCTGCCAG 15 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 20122981 20122991 5.0E-06 AGCCCCAGGCA 11 NFIX_NFI_full_dimeric_15_2 SELEX + 20122966 20122980 5.0E-06 CTGGCAGGCTGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 20122966 20122980 4.0E-06 CTGGCAGCCTGCCAG 15 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 20115611 20115624 8.0E-06 GACCACACACTTAA 14 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 20122981 20122991 6.0E-06 AGCCCCAGGCA 11 TCF7L1_HMG_full_monomeric_12_1 SELEX - 20116694 20116705 5.0E-06 AGACATCAAAGC 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 20116691 20116705 4.0E-06 AGACATCAAAGCCTC 15 REL_MA0101.1 JASPAR + 20118711 20118720 3.0E-06 TGGGATTTCC 10 REL_MA0101.1 JASPAR + 20119333 20119342 3.0E-06 TGGGATTTCC 10 HES7_bHLH_DBD_dimeric_12_1 SELEX + 20120055 20120066 8.0E-06 TGCCACGTGCCT 12 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 20116821 20116830 1.0E-06 CCAATAAAAT 10 RELA_MA0107.1 JASPAR + 20118711 20118720 7.0E-06 TGGGATTTCC 10 RELA_MA0107.1 JASPAR + 20119333 20119342 7.0E-06 TGGGATTTCC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 20116694 20116705 2.0E-06 AGACATCAAAGC 12 SP1_C2H2_DBD_monomeric_11_1 SELEX + 20118652 20118662 3.0E-06 ACCCCGCCCAC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 20116821 20116830 1.0E-06 CCAATAAAAT 10 T_TBX_full_dimeric_16_1 SELEX + 20120028 20120043 8.0E-06 TCCCACGTAGGTGTGG 16 T_TBX_full_dimeric_16_1 SELEX - 20120028 20120043 1.0E-05 CCACACCTACGTGGGA 16 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 20116821 20116829 6.0E-06 CCAATAAAA 9 FEV_MA0156.1 JASPAR - 20118715 20118722 1.0E-05 CAGGAAAT 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 20122981 20122991 6.0E-06 AGCCCCAGGCA 11 NFIB_NFI_full_dimeric_15_1 SELEX - 20122966 20122980 4.0E-06 CTGGCAGCCTGCCAG 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 20116821 20116830 1.0E-06 CCAATAAAAT 10 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 20120083 20120102 1.0E-05 CAAGGGCCAGGCCCGGGTCA 20 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 20119784 20119797 2.0E-06 TGTCCCCACACAAG 14 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 20122981 20122991 6.0E-06 AGCCCCAGGCA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 20116821 20116830 1.0E-06 CCAATAAAAT 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 20118711 20118720 4.0E-06 TGGGATTTCC 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 20119333 20119342 4.0E-06 TGGGATTTCC 10 V_NFKB_C_M00208 TRANSFAC - 20116876 20116887 4.0E-06 GGGGACTCTCCC 12 V_SP1_Q6_01_M00931 TRANSFAC - 20118642 20118651 4.0E-06 GGGGCGGGGC 10 V_AP4_Q6_M00176 TRANSFAC + 20120133 20120142 5.0E-06 CACAGCTGGA 10 V_ARNT_01_M00236 TRANSFAC + 20120053 20120068 5.0E-06 GTTGCCACGTGCCTGC 16 V_CEBP_Q2_M00190 TRANSFAC + 20122917 20122930 3.0E-06 ACATTGCAGAATGA 14 V_HOXD13_01_M01404 TRANSFAC + 20116818 20116833 0.0E+00 GTTCCAATAAAATTCC 16 V_CMYC_02_M01154 TRANSFAC + 20120055 20120066 7.0E-06 TGCCACGTGCCT 12 V_ELF4_04_M02850 TRANSFAC + 20116818 20116834 9.0E-06 GTTCCAATAAAATTCCA 17 V_HOXB13_01_M01467 TRANSFAC + 20116818 20116833 0.0E+00 GTTCCAATAAAATTCC 16 V_POLY_C_M00212 TRANSFAC + 20116822 20116839 1.0E-06 CAATAAAATTCCAGGCTG 18 V_CREL_01_M00053 TRANSFAC + 20118711 20118720 3.0E-06 TGGGATTTCC 10 V_CREL_01_M00053 TRANSFAC + 20119333 20119342 3.0E-06 TGGGATTTCC 10 V_RFX1_01_M00280 TRANSFAC - 20120051 20120067 5.0E-06 CAGGCACGTGGCAACGA 17 V_NFKB_Q6_M00194 TRANSFAC - 20116875 20116888 2.0E-06 TGGGGACTCTCCCT 14 V_ZBRK1_01_M01105 TRANSFAC - 20119006 20119020 1.0E-05 TGGGCGCAGCCCTTT 15 V_ATF3_Q6_M00513 TRANSFAC - 20119293 20119306 9.0E-06 CTCTTATGTCAGCG 14 V_ATF3_Q6_M00513 TRANSFAC - 20121431 20121444 7.0E-06 CTCTGACATCACGC 14 V_HNF4_DR1_Q3_M00764 TRANSFAC + 20120094 20120106 8.0E-06 TGGCCCTTGGCCT 13 V_E2_01_M00107 TRANSFAC - 20119203 20119218 6.0E-06 GGACCGCCACCGGTTC 16 V_MAZR_01_M00491 TRANSFAC + 20118621 20118633 2.0E-06 TGGGGGGGGGACC 13 V_TAL1_01_M01591 TRANSFAC + 20123000 20123012 2.0E-06 CTGGCTTATCTCT 13 V_RBPJK_01_M01112 TRANSFAC - 20120026 20120036 1.0E-05 TACGTGGGAAC 11 V_FOXA2_03_M02260 TRANSFAC + 20116975 20116986 9.0E-06 TGTTGACACTGC 12 V_STAT6_02_M00500 TRANSFAC + 20118714 20118721 1.0E-05 GATTTCCT 8 V_STAT6_02_M00500 TRANSFAC + 20119336 20119343 1.0E-05 GATTTCCT 8 V_E47_01_M00002 TRANSFAC - 20119032 20119046 8.0E-06 CGTGCAGGTGGCCTC 15 V_LEF1TCF1_Q4_M00978 TRANSFAC + 20116694 20116704 9.0E-06 GCTTTGATGTC 11 V_RFX3_05_M02892 TRANSFAC - 20116861 20116883 4.0E-06 ACTCTCCCTTGGAGACATTTCTC 23 V_CTF1_01_M01196 TRANSFAC - 20122966 20122979 3.0E-06 TGGCAGCCTGCCAG 14 V_CTF1_01_M01196 TRANSFAC + 20122967 20122980 4.0E-06 TGGCAGGCTGCCAG 14 V_HOXD10_01_M01375 TRANSFAC + 20116818 20116834 4.0E-06 GTTCCAATAAAATTCCA 17 V_ZID_01_M00085 TRANSFAC + 20119545 20119557 2.0E-06 CGGCTCCAGCACC 13 TLX1_NFIC_MA0119.1 JASPAR - 20122966 20122979 3.0E-06 TGGCAGCCTGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR + 20122967 20122980 4.0E-06 TGGCAGGCTGCCAG 14 V_FEV_01_M02269 TRANSFAC - 20118715 20118722 1.0E-05 CAGGAAAT 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.