Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZDHHC1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29800 zinc finger, DHHC-type containing 1 chr16 - 67449839 - 67455339 67450339 Transcription Factor Binding Sites   Download all TFBS in the ZDHHC1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 67448131 67448140 9.0E-06 GTCATTAAAA 10 Pax5_MA0014.1 JASPAR + 67448037 67448056 9.0E-06 AGGCCAGTGAAGAGAGGCCA 20 GABPA_MA0062.2 JASPAR - 67453544 67453554 3.0E-06 CCGGAAGTGGG 11 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 67448437 67448454 2.0E-06 GCATTTAGAATGCACTTA 18 MYF6_bHLH_full_dimeric_10_1 SELEX + 67455162 67455171 7.0E-06 AACATCTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 67455162 67455171 8.0E-06 AACAGATGTT 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 67448131 67448140 5.0E-06 GTCATTAAAA 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 67448130 67448141 2.0E-06 AGTCATTAAAAA 12 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 67454020 67454035 1.0E-06 ACAGTTCTTGAGGTCA 16 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 67448438 67448454 7.0E-06 CATTTAGAATGCACTTA 17 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 67448063 67448071 3.0E-06 TAAAGTCAA 9 SOX8_HMG_DBD_dimeric_16_1 SELEX + 67454044 67454059 9.0E-06 CACAATTGGCAGTGAT 16 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 67448060 67448070 5.0E-06 AAAGTCAATAA 11 SOX8_HMG_full_dimeric_17_1 SELEX + 67454044 67454060 8.0E-06 CACAATTGGCAGTGATT 17 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 67453632 67453643 7.0E-06 AATGATGTCATC 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 67453632 67453643 4.0E-06 GATGACATCATT 12 ZNF238_C2H2_full_monomeric_13_1 SELEX - 67455161 67455173 5.0E-06 AAAACAGATGTTG 13 TCF7L1_HMG_full_monomeric_12_1 SELEX + 67453679 67453690 2.0E-06 ATACATCAAAGG 12 JDP2_bZIP_full_dimeric_12_1 SELEX + 67453632 67453643 7.0E-06 AATGATGTCATC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 67453632 67453643 5.0E-06 GATGACATCATT 12 LEF1_HMG_DBD_monomeric_15_1 SELEX + 67453679 67453693 1.0E-06 ATACATCAAAGGGGA 15 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 67448131 67448140 2.0E-06 GTCATTAAAA 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 67453631 67453644 8.0E-06 CAATGATGTCATCG 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 67453631 67453644 9.0E-06 CGATGACATCATTG 14 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 67448130 67448140 5.0E-06 AGTCATTAAAA 11 Gfi_MA0038.1 JASPAR - 67454053 67454062 1.0E-06 CAAATCACTG 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 67455160 67455173 3.0E-06 GCAACATCTGTTTT 14 SOX14_HMG_DBD_dimeric_13_1 SELEX - 67448054 67448066 6.0E-06 TCAATAACCTTGG 13 CREB3_bZIP_full_dimeric_14_1 SELEX + 67453631 67453644 7.0E-06 CAATGATGTCATCG 14 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 67448130 67448140 3.0E-06 AGTCATTAAAA 11 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 67453679 67453690 0.0E+00 ATACATCAAAGG 12 SOX7_HMG_full_dimeric_16_1 SELEX + 67454044 67454059 5.0E-06 CACAATTGGCAGTGAT 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 67448437 67448454 6.0E-06 GCATTTAGAATGCACTTA 18 RFX5_RFX_DBD_dimeric_16_3 SELEX + 67450386 67450401 9.0E-06 CGTTCCCCTGACAACG 16 INSM1_MA0155.1 JASPAR - 67450606 67450617 9.0E-06 TGGAAGGGGGCG 12 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 67455175 67455185 8.0E-06 ACCCTCAGGCT 11 GSC_homeodomain_full_monomeric_10_1 SELEX + 67453646 67453655 2.0E-06 CCTAATCCCT 10 SOX21_HMG_DBD_dimeric_16_1 SELEX + 67454044 67454059 5.0E-06 CACAATTGGCAGTGAT 16 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 67448131 67448140 4.0E-06 GTCATTAAAA 10 GABPA_ETS_full_monomeric_10_1 SELEX - 67453546 67453555 9.0E-06 GCCGGAAGTG 10 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX + 67448130 67448140 9.0E-06 AGTCATTAAAA 11 RUNX1_MA0002.2 JASPAR - 67446459 67446469 8.0E-06 TTCTGTGGCTT 11 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 67448437 67448454 5.0E-06 GCATTTAGAATGCACTTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 67448130 67448140 5.0E-06 AGTCATTAAAA 11 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 67453631 67453644 3.0E-06 CGATGACATCATTG 14 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 67448060 67448070 5.0E-06 AAAGTCAATAA 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 67448130 67448140 6.0E-06 AGTCATTAAAA 11 ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 67448059 67448072 9.0E-06 TTAAAGTCAATAAC 14 V_HOXA9_01_M01351 TRANSFAC + 67448128 67448144 3.0E-06 AGAGTCATTAAAAACAA 17 V_FOXP1_01_M00987 TRANSFAC - 67448421 67448440 1.0E-06 ATGCTGGTGTTGGTTATTAT 20 RXR_RAR_DR5_MA0159.1 JASPAR - 67446466 67446482 3.0E-06 AGTTCATAGGAAGTTCT 17 RXR_RAR_DR5_MA0159.1 JASPAR - 67448302 67448318 9.0E-06 GGTTCAGACACGGGTGA 17 V_HNF3B_01_M00131 TRANSFAC + 67446398 67446412 1.0E-06 TGAAATGTTTTCTCA 15 V_LEF1_04_M02774 TRANSFAC - 67453678 67453694 0.0E+00 ATCCCCTTTGATGTATC 17 V_FXR_Q3_M00631 TRANSFAC + 67448055 67448068 8.0E-06 CAAGGTTATTGACT 14 V_FXR_Q3_M00631 TRANSFAC - 67448058 67448071 7.0E-06 TAAAGTCAATAACC 14 TAL1_TCF3_MA0091.1 JASPAR + 67455160 67455171 2.0E-06 GCAACATCTGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 67455162 67455173 6.0E-06 AAAACAGATGTT 12 V_FOXA2_04_M02749 TRANSFAC - 67448056 67448072 9.0E-06 TTAAAGTCAATAACCTT 17 V_NF1A_Q6_M02103 TRANSFAC - 67449863 67449878 2.0E-06 CAGGCTCTGTGCCAGG 16 V_FOXO4_02_M00476 TRANSFAC - 67448134 67448147 8.0E-06 ACGTTGTTTTTAAT 14 V_SATB1_Q3_M01723 TRANSFAC - 67455041 67455056 7.0E-06 GATCCTAAAGGCAAAA 16 V_GABP_B_M00341 TRANSFAC - 67453544 67453555 4.0E-06 GCCGGAAGTGGG 12 V_GTF2IRD1_01_M01229 TRANSFAC - 67453646 67453654 7.0E-06 GGGATTAGG 9 V_JUNDM2_03_M02772 TRANSFAC + 67453630 67453645 2.0E-06 ACAATGATGTCATCGC 16 V_JUNDM2_03_M02772 TRANSFAC - 67453630 67453645 1.0E-06 GCGATGACATCATTGT 16 V_NKX61_03_M01489 TRANSFAC - 67448127 67448143 9.0E-06 TGTTTTTAATGACTCTT 17 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 67454013 67454027 2.0E-06 TGAGGTCAGAAGTTG 15 V_PPARGRXRA_01_M02262 TRANSFAC - 67450527 67450541 8.0E-06 CTAGACGAAAGGTTA 15 V_HNF6_Q6_M00639 TRANSFAC - 67448060 67448071 0.0E+00 TAAAGTCAATAA 12 V_TCF3_04_M02816 TRANSFAC + 67453678 67453694 0.0E+00 GATACATCAAAGGGGAT 17 V_TGIF_02_M01346 TRANSFAC - 67448361 67448377 4.0E-06 GGTAATGACAGCAGAGA 17 V_RUNX1_01_M02257 TRANSFAC - 67446459 67446469 8.0E-06 TTCTGTGGCTT 11 V_GFI1_01_M00250 TRANSFAC - 67454045 67454068 1.0E-06 CTGAAACAAATCACTGCCAATTGT 24 V_XFD3_01_M00269 TRANSFAC - 67448057 67448070 5.0E-06 AAAGTCAATAACCT 14 V_HOXB9_01_M01426 TRANSFAC + 67448128 67448143 0.0E+00 AGAGTCATTAAAAACA 16 V_ER81_02_M02065 TRANSFAC - 67453546 67453555 1.0E-05 GCCGGAAGTG 10 V_PAX2_01_M00098 TRANSFAC + 67449768 67449786 7.0E-06 TTTAGTCATGTATGACATC 19 V_HOXC11_01_M01329 TRANSFAC + 67448127 67448142 1.0E-05 AAGAGTCATTAAAAAC 16 V_SOX_Q6_M01014 TRANSFAC + 67453591 67453603 2.0E-06 CTCTTTGTTAGAG 13 V_HOXD11_01_M01434 TRANSFAC + 67448127 67448143 6.0E-06 AAGAGTCATTAAAAACA 17 V_GADP_01_M01258 TRANSFAC + 67453546 67453557 1.0E-06 CACTTCCGGCCC 12 V_GR_01_M00955 TRANSFAC - 67445448 67445474 8.0E-06 GTCAAAGGGCATATATGTTCTAAAGTT 27 V_TAL1BETAE47_01_M00065 TRANSFAC - 67455159 67455174 4.0E-06 GAAAACAGATGTTGCC 16 V_GR_Q6_M00192 TRANSFAC - 67445452 67445470 9.0E-06 AAGGGCATATATGTTCTAA 19 V_GRE_C_M00205 TRANSFAC - 67446465 67446480 6.0E-06 TTCATAGGAAGTTCTG 16 V_TCF7_03_M02817 TRANSFAC + 67453678 67453694 1.0E-06 GATACATCAAAGGGGAT 17 V_HOXA11_01_M01378 TRANSFAC + 67448127 67448142 7.0E-06 AAGAGTCATTAAAAAC 16 V_TGIF1_01_M03111 TRANSFAC - 67448361 67448377 4.0E-06 GGTAATGACAGCAGAGA 17 V_NKX63_01_M01470 TRANSFAC - 67448127 67448143 3.0E-06 TGTTTTTAATGACTCTT 17 V_INSM1_01_M02268 TRANSFAC - 67450606 67450617 9.0E-06 TGGAAGGGGGCG 12 V_FOXO1_Q5_M01216 TRANSFAC + 67448137 67448145 5.0E-06 AAAAACAAC 9 V_SOX17_04_M02904 TRANSFAC - 67453658 67453674 5.0E-06 TAACACATTCAAAGATT 17 V_HOXD9_Q2_M01834 TRANSFAC + 67448130 67448139 8.0E-06 AGTCATTAAA 10 V_TAL1BETAITF2_01_M00070 TRANSFAC - 67455159 67455174 2.0E-06 GAAAACAGATGTTGCC 16 V_FXR_IR1_Q6_M00767 TRANSFAC - 67448057 67448069 1.0E-06 AAGTCAATAACCT 13 V_VJUN_01_M00036 TRANSFAC + 67453630 67453645 5.0E-06 ACAATGATGTCATCGC 16 V_VJUN_01_M00036 TRANSFAC - 67453630 67453645 4.0E-06 GCGATGACATCATTGT 16 V_GFI1_Q6_M01067 TRANSFAC - 67454051 67454063 2.0E-06 ACAAATCACTGCC 13 V_LEF1_Q2_01_M01022 TRANSFAC + 67453682 67453691 3.0E-06 CATCAAAGGG 10 V_IPF1_05_M01255 TRANSFAC + 67448130 67448141 0.0E+00 AGTCATTAAAAA 12 V_CAAT_C_M00200 TRANSFAC + 67448382 67448406 3.0E-06 TCCAAACCTCCAGCATCGCTCTCCT 25 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 67455159 67455174 1.0E-06 GAAAACAGATGTTGCC 16 V_EBNA1_01_M01745 TRANSFAC + 67450007 67450022 1.0E-06 GGCAGCATCCGCTACC 16 V_EBNA1_01_M01745 TRANSFAC - 67450007 67450022 3.0E-06 GGTAGCGGATGCTGCC 16 V_PLAG1_01_M01778 TRANSFAC - 67450486 67450501 8.0E-06 GGGGCACCAAGAGGGT 16 V_ATF1_03_M02738 TRANSFAC - 67453630 67453645 5.0E-06 GCGATGACATCATTGT 16 V_NANOG_01_M01123 TRANSFAC + 67454002 67454013 1.0E-06 GGACCCATTTCC 12 V_GFI1B_01_M01058 TRANSFAC - 67454051 67454062 2.0E-06 CAAATCACTGCC 12 V_PXR_Q2_M00964 TRANSFAC + 67448056 67448067 5.0E-06 AAGGTTATTGAC 12 V_PXR_Q2_M00964 TRANSFAC - 67448059 67448070 8.0E-06 AAAGTCAATAAC 12 V_NKX61_02_M01469 TRANSFAC - 67448128 67448143 5.0E-06 TGTTTTTAATGACTCT 16 V_ZBTB4_04_M02929 TRANSFAC - 67454046 67454061 6.0E-06 AAATCACTGCCAATTG 16 V_TCF7_04_M02921 TRANSFAC + 67448130 67448144 9.0E-06 AGTCATTAAAAACAA 15 V_LEF1TCF1_Q4_M00978 TRANSFAC - 67453680 67453690 5.0E-06 CCTTTGATGTA 11 V_RXR_RAR_01_M02272 TRANSFAC - 67446466 67446482 3.0E-06 AGTTCATAGGAAGTTCT 17 V_RXR_RAR_01_M02272 TRANSFAC - 67448302 67448318 9.0E-06 GGTTCAGACACGGGTGA 17 V_IPF1_Q4_01_M01013 TRANSFAC + 67448128 67448142 5.0E-06 AGAGTCATTAAAAAC 15 V_ARP1_01_M00155 TRANSFAC + 67454012 67454027 7.0E-06 CCAACTTCTGACCTCA 16 V_BRN3C_01_M01408 TRANSFAC - 67448128 67448143 5.0E-06 TGTTTTTAATGACTCT 16 V_TCF11MAFG_01_M00284 TRANSFAC - 67446397 67446418 7.0E-06 CAAGAGTGAGAAAACATTTCAC 22 PPARG_RXRA_MA0065.2 JASPAR - 67450527 67450541 8.0E-06 CTAGACGAAAGGTTA 15 V_T3RALPHA_Q6_M01724 TRANSFAC - 67454019 67454029 1.0E-06 CTTGAGGTCAG 11 V_HOXC9_01_M01416 TRANSFAC + 67448127 67448142 4.0E-06 AAGAGTCATTAAAAAC 16 V_TCF4_01_M01705 TRANSFAC - 67453682 67453690 5.0E-06 CCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.