Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PYCARD Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29108 PYD and CARD domain containing chr16 - 31213597 - 31219097 31214097 Transcription Factor Binding Sites   Download all TFBS in the PYCARD promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 31212168 31212183 1.0E-06 ATGAATAAGTAATAAC 16 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 31215458 31215468 8.0E-06 GGTGACTCATG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 31215458 31215468 6.0E-06 CATGAGTCACC 11 TBX1_TBX_DBD_dimeric_20_2 SELEX - 31214480 31214499 1.0E-06 TTCACGCTTCTAGCTGTCAT 20 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 31212282 31212295 3.0E-06 AGGGTCATAGGTTG 14 POU2F1_POU_DBD_dimeric_14_1 SELEX + 31212167 31212180 6.0E-06 AATGAATAAGTAAT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 31212167 31212180 7.0E-06 ATTACTTATTCATT 14 Tp53_p53l_DBD_dimeric_18_1 SELEX - 31214312 31214329 4.0E-06 GCAAGCCCAGAGACAAGC 18 POU3F3_POU_DBD_monomeric_12_1 SELEX + 31212164 31212175 9.0E-06 ATGAATGAATAA 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 31212168 31212179 6.0E-06 ATGAATAAGTAA 12 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 31212285 31212297 9.0E-06 AAAGGGTCATAGG 13 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 31212282 31212295 7.0E-06 AGGGTCATAGGTTG 14 ZNF435_C2H2_full_dimeric_18_1 SELEX - 31215190 31215207 9.0E-06 AATCTTTACTCAGCACCT 18 TBP_MA0108.2 JASPAR + 31212832 31212846 2.0E-06 GTATAAAAAGATCAG 15 STAT1_MA0137.2 JASPAR + 31212232 31212246 2.0E-06 CATTTCCTGAAAATC 15 SPIB_ETS_DBD_monomeric_14_1 SELEX + 31213657 31213670 3.0E-06 AGAAAGCGGAAGAG 14 Hic1_C2H2_DBD_monomer_9_1 SELEX - 31212256 31212264 4.0E-06 ATGCCAACC 9 OTX2_homeodomain_DBD_dimeric_15_1 SELEX + 31212330 31212344 8.0E-06 TTTAAGCCTGTTAAG 15 POU4F3_POU_DBD_monomeric_16_1 SELEX + 31212168 31212183 1.0E-06 ATGAATAAGTAATAAC 16 POU2F3_POU_DBD_dimeric_12_1 SELEX + 31212168 31212179 1.0E-06 ATGAATAAGTAA 12 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 31212281 31212295 8.0E-06 AGGGTCATAGGTTGC 15 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 31212282 31212295 3.0E-06 AGGGTCATAGGTTG 14 SOX7_HMG_full_dimeric_16_1 SELEX + 31212140 31212155 5.0E-06 AAAAGTTTTAAATGTT 16 PRDM4_C2H2_full_monomeric_13_1 SELEX + 31214405 31214417 8.0E-06 TTTCTAGAACCCC 13 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 31212435 31212451 1.0E-05 AAATTTCTCTAATTCTG 17 POU1F1_POU_DBD_monomeric_17_1 SELEX + 31212165 31212181 0.0E+00 TGAATGAATAAGTAATA 17 POU3F1_POU_DBD_monomeric_12_2 SELEX + 31212168 31212179 8.0E-06 ATGAATAAGTAA 12 FEV_MA0156.1 JASPAR - 31212233 31212240 1.0E-05 CAGGAAAT 8 JDP2_bZIP_full_dimeric_9_1 SELEX - 31215459 31215467 1.0E-05 ATGAGTCAC 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 31212168 31212179 2.0E-06 ATGAATAAGTAA 12 VDR_nuclearreceptor_full_dimeric_16_1 SELEX - 31213942 31213957 1.0E-05 GAGCTCAAGAAGTTCA 16 MAFK_bZIP_full_monomeric_12_1 SELEX + 31215203 31215214 3.0E-06 AGATTTGCTGAG 12 SPI1_ETS_full_monomeric_14_1 SELEX + 31213657 31213670 3.0E-06 AGAAAGCGGAAGAG 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 31212168 31212179 1.0E-06 ATGAATAAGTAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 31212168 31212179 1.0E-05 TTACTTATTCAT 12 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 31212282 31212295 1.0E-05 AGGGTCATAGGTTG 14 POU4F1_POU_DBD_monomeric_14_1 SELEX + 31212168 31212181 1.0E-06 ATGAATAAGTAATA 14 V_FOXP1_01_M00987 TRANSFAC + 31212593 31212612 4.0E-06 TTATCTATAATGGTAAGGTT 20 V_TGIF_01_M00418 TRANSFAC - 31214478 31214488 2.0E-06 AGCTGTCATGA 11 V_MEIS1_02_M01419 TRANSFAC - 31214477 31214492 3.0E-06 TTCTAGCTGTCATGAT 16 V_BCL6_Q3_01_M02085 TRANSFAC + 31214404 31214413 2.0E-06 ATTTCTAGAA 10 V_POU3F3_01_M03090 TRANSFAC + 31212163 31212179 1.0E-06 AATGAATGAATAAGTAA 17 V_BACH2_01_M00490 TRANSFAC - 31215458 31215468 2.0E-06 CATGAGTCACC 11 V_NFMUE1_Q6_M00651 TRANSFAC + 31213765 31213773 6.0E-06 CGGCCATCT 9 V_OCTAMER_01_M01324 TRANSFAC + 31212163 31212179 1.0E-06 AATGAATGAATAAGTAA 17 V_POU1F1_Q6_M00744 TRANSFAC + 31212168 31212177 4.0E-06 ATGAATAAGT 10 V_GABPA_04_M02858 TRANSFAC - 31213696 31213711 3.0E-06 CCGTCTTTCCCCTCCA 16 V_NERF_Q2_M00531 TRANSFAC + 31212676 31212693 2.0E-06 TACCAGGAAGGATGGGGG 18 V_SP1_02_M01303 TRANSFAC - 31214129 31214139 3.0E-06 GGGGCGGGGAG 11 V_TCFAP2E_04_M02926 TRANSFAC + 31212130 31212143 0.0E+00 ATCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 31215156 31215169 5.0E-06 CATCTGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 31215157 31215170 0.0E+00 ATCTGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 31215160 31215173 7.0E-06 TGAAAAAAAAAAAT 14 V_CDX_Q5_M00991 TRANSFAC + 31212134 31212151 1.0E-06 CAAAAAAAAAGTTTTAAA 18 V_TGIF2_01_M01407 TRANSFAC - 31214477 31214492 7.0E-06 TTCTAGCTGTCATGAT 16 V_RPC155_01_M01798 TRANSFAC - 31209562 31209577 0.0E+00 TCAAGAGTTTAAGACC 16 V_ETS_Q4_M00771 TRANSFAC + 31212229 31212240 4.0E-06 ACTCATTTCCTG 12 RXRA_VDR_MA0074.1 JASPAR - 31213942 31213956 8.0E-06 AGCTCAAGAAGTTCA 15 V_ELF4_04_M02850 TRANSFAC + 31212131 31212147 0.0E+00 TCTCAAAAAAAAAGTTT 17 V_ELF4_04_M02850 TRANSFAC + 31215158 31215174 7.0E-06 TCTGAAAAAAAAAAATG 17 V_ELF4_04_M02850 TRANSFAC + 31215159 31215175 1.0E-06 CTGAAAAAAAAAAATGT 17 V_ELF4_04_M02850 TRANSFAC + 31215161 31215177 1.0E-05 GAAAAAAAAAAATGTAT 17 V_BACH1_01_M00495 TRANSFAC - 31215456 31215470 4.0E-06 GGCATGAGTCACCGT 15 V_MEIS2_01_M01488 TRANSFAC - 31214477 31214492 4.0E-06 TTCTAGCTGTCATGAT 16 V_POU3F2_01_M00463 TRANSFAC - 31215164 31215177 5.0E-06 ATACATTTTTTTTT 14 V_TGIF_02_M01346 TRANSFAC + 31214476 31214492 4.0E-06 AATCATGACAGCTAGAA 17 V_CEBPE_Q6_M01868 TRANSFAC + 31215110 31215123 8.0E-06 CAAGATTGCACCAC 14 V_ZFP105_03_M02827 TRANSFAC + 31212132 31212146 5.0E-06 CTCAAAAAAAAAGTT 15 V_ZFP105_03_M02827 TRANSFAC + 31215160 31215174 4.0E-06 TGAAAAAAAAAAATG 15 V_ZFP105_03_M02827 TRANSFAC + 31215161 31215175 8.0E-06 GAAAAAAAAAAATGT 15 V_ZFP105_03_M02827 TRANSFAC + 31215162 31215176 3.0E-06 AAAAAAAAAAATGTA 15 V_FKLF_Q5_M01837 TRANSFAC + 31213166 31213175 2.0E-06 GGGGTGGGAG 10 V_TBX18_01_M01262 TRANSFAC + 31213451 31213469 8.0E-06 GGGTGTGGAGGCCTCACCT 19 V_GATA3_05_M02859 TRANSFAC - 31215145 31215166 2.0E-06 TTTTTCAGATGGAATCTAGCTC 22 V_HNF1_Q6_M00790 TRANSFAC - 31212165 31212182 8.0E-06 TTATTACTTATTCATTCA 18 V_TATA_01_M00252 TRANSFAC + 31212832 31212846 2.0E-06 GTATAAAAAGATCAG 15 V_KROX_Q6_M00982 TRANSFAC - 31213720 31213733 9.0E-06 GCCGCCCCCGTTCC 14 V_CEBPB_02_M00117 TRANSFAC + 31215112 31215125 5.0E-06 AGATTGCACCACTG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 31213691 31213704 8.0E-06 GTGGGTGGAGGGGA 14 V_AP2BETA_Q3_M01858 TRANSFAC + 31213155 31213170 4.0E-06 GTGCAGGCCTGGGGGT 16 V_IRF_Q6_M00772 TRANSFAC - 31213652 31213666 5.0E-06 TCCGCTTTCTGTTCC 15 V_MEF2_03_M00232 TRANSFAC - 31212393 31212414 4.0E-06 GCATTATCTAAACATAGGACAG 22 V_HIC1_05_M02763 TRANSFAC - 31212252 31212267 4.0E-06 AACATGCCAACCACCA 16 V_TATA_C_M00216 TRANSFAC + 31212831 31212840 7.0E-06 TGTATAAAAA 10 V_JUNDM2_04_M02876 TRANSFAC - 31215456 31215471 6.0E-06 AGGCATGAGTCACCGT 16 V_OCT1_04_M00138 TRANSFAC + 31212160 31212182 6.0E-06 TCAAATGAATGAATAAGTAATAA 23 V_OCT1_04_M00138 TRANSFAC - 31212440 31212462 5.0E-06 GGAGAAAAATGCAGAATTAGAGA 23 V_HBP1_03_M02762 TRANSFAC + 31212161 31212176 0.0E+00 CAAATGAATGAATAAG 16 V_MUSCLE_INI_B_M00321 TRANSFAC - 31214294 31214314 3.0E-06 AGCAGGCGCCACCCATGAGCC 21 V_SPIB_01_M01204 TRANSFAC - 31213006 31213022 5.0E-06 AAGATGCGGAAGCTCTT 17 V_SPIB_01_M01204 TRANSFAC + 31213657 31213673 3.0E-06 AGAAAGCGGAAGAGCCC 17 V_NKX3A_01_M00451 TRANSFAC + 31212170 31212181 6.0E-06 GAATAAGTAATA 12 V_HNF4A_Q6_01_M02016 TRANSFAC + 31212272 31212286 8.0E-06 GAGCAAAGTGCAACC 15 V_MAFK_Q3_M02022 TRANSFAC - 31215192 31215202 1.0E-06 TTACTCAGCAC 11 V_TGIF1_01_M03111 TRANSFAC + 31214476 31214492 4.0E-06 AATCATGACAGCTAGAA 17 V_STAT3_03_M01595 TRANSFAC - 31212230 31212245 8.0E-06 ATTTTCAGGAAATGAG 16 V_MZF1_02_M00084 TRANSFAC + 31213694 31213706 9.0E-06 GGTGGAGGGGAAA 13 V_ICSBP_Q6_M00699 TRANSFAC + 31213653 31213664 9.0E-06 GAACAGAAAGCG 12 V_CETS1P54_03_M01078 TRANSFAC - 31212229 31212244 9.0E-06 TTTTCAGGAAATGAGT 16 V_GATA4_Q3_M00632 TRANSFAC + 31212204 31212215 1.0E-05 AGAAAAGAGGCA 12 V_HAND1E47_01_M00222 TRANSFAC + 31215170 31215185 4.0E-06 AAATGTATCTGGAACA 16 V_MRG2_01_M01395 TRANSFAC - 31214477 31214492 9.0E-06 TTCTAGCTGTCATGAT 16 V_ZBTB3_03_M02825 TRANSFAC - 31213288 31213304 7.0E-06 CATCCCACTGCATGTGG 17 V_MYOGNF1_01_M00056 TRANSFAC + 31212801 31212829 3.0E-06 CACAAGTTCAAGCTGGCTTTTCGTATATT 29 V_HNF4_Q6_01_M01031 TRANSFAC + 31212271 31212284 5.0E-06 TGAGCAAAGTGCAA 14 V_ZBTB12_03_M02824 TRANSFAC - 31214403 31214419 7.0E-06 TCGGGGTTCTAGAAATC 17 V_P63_01_M01656 TRANSFAC + 31212963 31212982 6.0E-06 GAGCAAGTCCTTGCAGGTCC 20 V_SOX14_04_M02901 TRANSFAC - 31212178 31212194 4.0E-06 TTTTTTGGAGGGTTATT 17 V_SRF_06_M02916 TRANSFAC + 31212130 31212146 6.0E-06 ATCTCAAAAAAAAAGTT 17 V_SRF_06_M02916 TRANSFAC + 31212131 31212147 1.0E-06 TCTCAAAAAAAAAGTTT 17 V_SRF_06_M02916 TRANSFAC + 31215157 31215173 2.0E-06 ATCTGAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 31215158 31215174 1.0E-06 TCTGAAAAAAAAAAATG 17 V_SRF_06_M02916 TRANSFAC + 31215159 31215175 0.0E+00 CTGAAAAAAAAAAATGT 17 V_SRF_06_M02916 TRANSFAC + 31215160 31215176 2.0E-06 TGAAAAAAAAAAATGTA 17 V_SRF_06_M02916 TRANSFAC + 31215161 31215177 1.0E-06 GAAAAAAAAAAATGTAT 17 V_NFE2_Q6_M02104 TRANSFAC + 31213181 31213196 7.0E-06 CATGAGCCAGCAGCCA 16 V_EKLF_Q5_M01874 TRANSFAC - 31213195 31213204 2.0E-06 CCACACCCTG 10 V_EKLF_Q5_M01874 TRANSFAC - 31213449 31213458 5.0E-06 CCACACCCAG 10 V_SOX1_03_M02802 TRANSFAC - 31212163 31212178 7.0E-06 TACTTATTCATTCATT 16 V_SRY_05_M02917 TRANSFAC - 31212822 31212838 2.0E-06 TTTATACACAATATACG 17 V_MEF2_01_M00006 TRANSFAC + 31212132 31212147 9.0E-06 CTCAAAAAAAAAGTTT 16 V_MAFK_04_M02880 TRANSFAC + 31212189 31212203 1.0E-06 AAAAAAATCGCATCA 15 V_ZID_01_M00085 TRANSFAC + 31214011 31214023 3.0E-06 TGGCTCCAGGATC 13 V_TCF3_05_M02920 TRANSFAC + 31215157 31215171 5.0E-06 ATCTGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 31215158 31215172 8.0E-06 TCTGAAAAAAAAAAA 15 V_FEV_01_M02269 TRANSFAC - 31212233 31212240 1.0E-05 CAGGAAAT 8 V_DMRT1_01_M01146 TRANSFAC - 31215166 31215180 2.0E-06 CAGATACATTTTTTT 15 V_STAT1_05_M01260 TRANSFAC - 31212225 31212246 0.0E+00 GATTTTCAGGAAATGAGTTGTG 22 V_VDRRXR_01_M01202 TRANSFAC - 31213942 31213956 8.0E-06 AGCTCAAGAAGTTCA 15 V_PPARG_01_M00512 TRANSFAC - 31212278 31212298 5.0E-06 GAAAGGGTCATAGGTTGCACT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.