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SSU72 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29101 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) chr1 - 1509762 - 1515262 1510262 Transcription Factor Binding Sites   Download all TFBS in the SSU72 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints YY1_C2H2_full_monomeric_11_1 SELEX - 1510007 1510017 5.0E-06 GCCGCCATTTT 11 SOX8_HMG_full_dimeric_17_1 SELEX + 1509438 1509454 5.0E-06 AATCCATGGCATTAAAA 17 PAX5_PAX_DBD_monomeric_18_1 SELEX + 1510490 1510507 6.0E-06 CGTCGCGCTTCACTAGAC 18 PAX2_PAX_DBD_monomeric_18_1 SELEX + 1510490 1510507 4.0E-06 CGTCGCGCTTCACTAGAC 18 Pax4_MA0068.1 JASPAR + 1509407 1509436 1.0E-05 AAAAAAAAGAAGAAGAAGTAGCAAACACAC 30 Pax4_MA0068.1 JASPAR + 1511374 1511403 4.0E-06 AAAAAAAAAAAAAAACAAGTGTACTCCCGT 30 Pax4_MA0068.1 JASPAR + 1511377 1511406 0.0E+00 AAAAAAAAAAAACAAGTGTACTCCCGTTCC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 1509410 1509423 8.0E-06 AAAAAGAAGAAGAA 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 1509413 1509426 8.0E-06 AAGAAGAAGAAGTA 14 YY2_C2H2_full_monomeric_11_1 SELEX - 1510007 1510017 1.0E-06 GCCGCCATTTT 11 Pou5f1_MA0142.1 JASPAR + 1509465 1509479 8.0E-06 CTTTGTTATTTACAA 15 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 1510259 1510276 8.0E-06 GGTGCTGATGTCAGGACG 18 SPI1_ETS_full_monomeric_14_1 SELEX + 1509410 1509423 5.0E-06 AAAAAGAAGAAGAA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 1509413 1509426 8.0E-06 AAGAAGAAGAAGTA 14 FOXB1_forkhead_full_monomeric_9_1 SELEX - 1509470 1509478 4.0E-06 TGTAAATAA 9 Sox2_MA0143.1 JASPAR + 1509464 1509478 3.0E-06 GCTTTGTTATTTACA 15 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 1509400 1509412 5.0E-06 GCAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 1509402 1509414 6.0E-06 AAAAAAAAAAAAA 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 1511451 1511462 4.0E-06 TTACACAAAAAA 12 V_FOXP1_01_M00987 TRANSFAC - 1509404 1509423 1.0E-06 TTCTTCTTCTTTTTTTTTTT 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 1510163 1510173 6.0E-06 CGCCCCCGGCC 11 V_TCF3_01_M01594 TRANSFAC - 1509404 1509416 7.0E-06 TCTTTTTTTTTTT 13 V_TCF3_01_M01594 TRANSFAC + 1509464 1509476 0.0E+00 GCTTTGTTATTTA 13 V_CDX2_Q5_01_M01659 TRANSFAC - 1510625 1510635 4.0E-06 TTCATAAAAGA 11 V_E2F4_04_M02847 TRANSFAC + 1510239 1510255 3.0E-06 GTCACGGCGCCAAGCGG 17 V_GCM_Q2_M00634 TRANSFAC + 1510540 1510551 2.0E-06 CATTCCCGCATT 12 V_E2F1_Q3_01_M00938 TRANSFAC - 1509990 1510005 2.0E-06 TTCGCGCGGAAGCGCC 16 V_SOX14_05_M02902 TRANSFAC - 1511449 1511463 9.0E-06 CTTACACAAAAAATA 15 V_FOXA2_04_M02749 TRANSFAC - 1509466 1509482 7.0E-06 ATGTTGTAAATAACAAA 17 V_HMGIY_Q3_M01010 TRANSFAC - 1509405 1509419 1.0E-05 TCTTCTTTTTTTTTT 15 V_BCL6_01_M01183 TRANSFAC - 1509403 1509418 3.0E-06 CTTCTTTTTTTTTTTT 16 V_POU5F1_02_M02245 TRANSFAC + 1509465 1509479 8.0E-06 CTTTGTTATTTACAA 15 V_MAFB_03_M02879 TRANSFAC + 1509395 1509409 7.0E-06 CTTTCGCAAAAAAAA 15 V_FOXO3A_Q1_M01137 TRANSFAC - 1509467 1509478 3.0E-06 TGTAAATAACAA 12 V_PU1_Q4_M01172 TRANSFAC - 1509408 1509426 0.0E+00 TACTTCTTCTTCTTTTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 1509411 1509429 1.0E-06 TGCTACTTCTTCTTCTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 1509414 1509432 4.0E-06 GTTTGCTACTTCTTCTTCT 19 V_TCFAP2E_04_M02926 TRANSFAC + 1509397 1509410 1.0E-06 TTCGCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 1509399 1509412 3.0E-06 CGCAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 1509401 1509414 2.0E-06 CAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 1509402 1509415 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC + 1509403 1509416 6.0E-06 AAAAAAAAAAAAGA 14 V_PAX5_02_M00144 TRANSFAC - 1510485 1510512 9.0E-06 AGCGGGTCTAGTGAAGCGCGACGACTCT 28 V_ELF4_04_M02850 TRANSFAC + 1509398 1509414 1.0E-06 TCGCAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC + 1509400 1509416 1.0E-06 GCAAAAAAAAAAAAAGA 17 V_FOXA2_02_M02853 TRANSFAC - 1509463 1509477 0.0E+00 GTAAATAACAAAGCG 15 V_ZFP105_03_M02827 TRANSFAC + 1509399 1509413 1.0E-06 CGCAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 1509400 1509414 8.0E-06 GCAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 1509401 1509415 1.0E-06 CAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 1509402 1509416 1.0E-06 AAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC + 1509403 1509417 0.0E+00 AAAAAAAAAAAAGAA 15 V_ZFP105_03_M02827 TRANSFAC + 1509406 1509420 3.0E-06 AAAAAAAAAGAAGAA 15 V_ZFP105_03_M02827 TRANSFAC - 1509464 1509478 9.0E-06 TGTAAATAACAAAGC 15 V_GFI1_01_M00250 TRANSFAC - 1509484 1509507 4.0E-06 CGCAACACAATCACGGCATACCAC 24 V_E2F2_04_M02846 TRANSFAC + 1510239 1510255 9.0E-06 GTCACGGCGCCAAGCGG 17 V_CMYB_01_M00004 TRANSFAC + 1511412 1511429 4.0E-06 TGGACAGGCAGTTGCTGG 18 V_YY1_Q6_02_M01035 TRANSFAC - 1510007 1510017 0.0E+00 GCCGCCATTTT 11 V_REX1_03_M01744 TRANSFAC + 1510007 1510018 0.0E+00 AAAATGGCGGCC 12 V_CDC5_01_M00478 TRANSFAC - 1510771 1510782 5.0E-06 GATTTACTGTAA 12 V_YY1_03_M02044 TRANSFAC - 1510006 1510017 0.0E+00 GCCGCCATTTTG 12 V_CIZ_01_M00734 TRANSFAC - 1511449 1511457 6.0E-06 CAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC + 1509401 1509414 8.0E-06 CAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 1509402 1509415 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC + 1509403 1509416 3.0E-06 AAAAAAAAAAAAGA 14 V_FAC1_01_M00456 TRANSFAC + 1509404 1509417 8.0E-06 AAAAAAAAAAAGAA 14 V_MYB_Q3_M00773 TRANSFAC + 1511415 1511425 9.0E-06 ACAGGCAGTTG 11 V_NFAT2_02_M01749 TRANSFAC - 1509513 1509523 3.0E-06 TTCCCTGGAAA 11 V_SOX2_01_M02246 TRANSFAC + 1509464 1509478 3.0E-06 GCTTTGTTATTTACA 15 V_SRF_06_M02916 TRANSFAC + 1509398 1509414 3.0E-06 TCGCAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 1509399 1509415 5.0E-06 CGCAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 1509400 1509416 0.0E+00 GCAAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC + 1509401 1509417 0.0E+00 CAAAAAAAAAAAAAGAA 17 V_SRF_06_M02916 TRANSFAC + 1509402 1509418 3.0E-06 AAAAAAAAAAAAAGAAG 17 V_PUR1_Q4_M01721 TRANSFAC - 1510518 1510526 6.0E-06 GGGACAGTG 9 V_SMAD3_Q6_M00701 TRANSFAC + 1510818 1510826 1.0E-05 TGTCTGCCT 9 V_SOX2_Q6_M01272 TRANSFAC + 1509460 1509475 7.0E-06 GACCGCTTTGTTATTT 16 V_GFI1_Q6_01_M02010 TRANSFAC + 1510754 1510763 7.0E-06 CTGAGATTTG 10 V_HOXD10_01_M01375 TRANSFAC + 1509443 1509459 8.0E-06 ATGGCATTAAAAAAAGA 17 V_TCF3_05_M02920 TRANSFAC + 1509397 1509411 2.0E-06 TTCGCAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 1509398 1509412 1.0E-06 TCGCAAAAAAAAAAA 15 V_NANOG_02_M01247 TRANSFAC + 1509401 1509420 7.0E-06 CAAAAAAAAAAAAAGAAGAA 20 V_NANOG_02_M01247 TRANSFAC - 1509459 1509478 3.0E-06 TGTAAATAACAAAGCGGTCT 20 V_HSF1_Q6_01_M02017 TRANSFAC - 1509348 1509361 0.0E+00 GTAGTTTCTGGAAT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.