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COMMD9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 29099 COMM domain containing 9 chr11 - 36310499 - 36315999 36310999 Transcription Factor Binding Sites   Download all TFBS in the COMMD9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 36314021 36314039 3.0E-06 TGGCCATTAGGGGGAGCTC 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 36314004 36314012 5.0E-06 ATAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 36314004 36314013 1.0E-06 ATAATAAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 36314004 36314013 3.0E-06 ATAATAAAAA 10 SPIC_ETS_full_monomeric_14_1 SELEX + 36314057 36314070 2.0E-06 CAAAAGGGGAAGGA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 36310545 36310558 1.0E-06 TAATTTCTTAATTG 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 36310545 36310558 0.0E+00 CAATTAAGAAATTA 14 GRHL1_CP2_full_dimeric_12_1 SELEX + 36311232 36311243 4.0E-06 GAAACAGGTTTT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 36311232 36311243 4.0E-06 AAAACCTGTTTC 12 GLI2_C2H2_DBD_monomeric_14_1 SELEX - 36311252 36311265 7.0E-06 GCCCACCCACATGG 14 BARX1_homeodomain_DBD_monomeric_8_1 SELEX - 36310552 36310559 5.0E-06 ACAATTAA 8 STAT1_MA0137.2 JASPAR - 36311377 36311391 2.0E-06 CAATTCCAAGAAGCC 15 SPIB_ETS_DBD_monomeric_14_1 SELEX + 36310584 36310597 4.0E-06 GAAATGGGGAACTG 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 36314057 36314070 6.0E-06 CAAAAGGGGAAGGA 14 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 36314003 36314012 1.0E-06 AATAATAAAA 10 CEBPB_bZIP_full_dimeric_10_1 SELEX + 36310555 36310564 1.0E-05 ATTGTGCAAT 10 CEBPB_bZIP_full_dimeric_10_1 SELEX - 36310555 36310564 9.0E-06 ATTGCACAAT 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 36314004 36314012 3.0E-06 ATAATAAAA 9 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 36313938 36313951 7.0E-06 GCTAACAGTACACA 14 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 36314003 36314013 2.0E-06 AATAATAAAAA 11 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 36313977 36313989 5.0E-06 GGATGATGAAATT 13 NFATC1_NFAT_full_dimeric_20_1 SELEX + 36311228 36311247 1.0E-06 CAGGGAAACAGGTTTTCCCT 20 NFATC1_NFAT_full_dimeric_20_1 SELEX - 36311229 36311248 1.0E-06 AAGGGAAAACCTGTTTCCCT 20 TFEB_bHLH_full_dimeric_10_1 SELEX + 36310972 36310981 8.0E-06 GTCACATGAC 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 36314004 36314013 3.0E-06 ATAATAAAAA 10 EN1_homeodomain_full_dimeric_14_1 SELEX + 36310545 36310558 3.0E-06 TAATTTCTTAATTG 14 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 36311240 36311256 1.0E-05 TTTTCCCTTGACCCATG 17 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 36314126 36314142 1.0E-05 CTTGCCCACAACAGGGG 17 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 36314004 36314013 6.0E-06 ATAATAAAAA 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 36311233 36311242 8.0E-06 AAACAGGTTT 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 36311233 36311242 7.0E-06 AAACCTGTTT 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 36314006 36314013 4.0E-06 AATAAAAA 8 FOXO3_forkhead_full_dimeric_14_1 SELEX + 36311231 36311244 1.0E-05 GGAAACAGGTTTTC 14 IRF5_IRF_full_dimeric_14_1 SELEX - 36313919 36313932 6.0E-06 TGGAAACTGAACCT 14 SPI1_ETS_full_monomeric_14_1 SELEX + 36310584 36310597 4.0E-06 GAAATGGGGAACTG 14 SPI1_ETS_full_monomeric_14_1 SELEX + 36314057 36314070 4.0E-06 CAAAAGGGGAAGGA 14 IRF3_IRF_full_trimeric_21_1 SELEX - 36313918 36313938 3.0E-06 AGGAGTTGGAAACTGAACCTA 21 CEBPE_bZIP_DBD_dimeric_10_1 SELEX - 36310555 36310564 7.0E-06 ATTGCACAAT 10 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 36310545 36310558 1.0E-06 TAATTTCTTAATTG 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 36310545 36310558 0.0E+00 CAATTAAGAAATTA 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 36314003 36314013 3.0E-06 AATAATAAAAA 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 36314004 36314012 3.0E-06 ATAATAAAA 9 CDX1_homeodomain_DBD_monomeric_9_1 SELEX + 36314004 36314012 3.0E-06 ATAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 36314003 36314013 1.0E-06 AATAATAAAAA 11 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 36311231 36311244 5.0E-06 GAAAACCTGTTTCC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 36314000 36314013 4.0E-06 AACAATAATAAAAA 14 V_SPI1_01_M01203 TRANSFAC + 36310584 36310600 2.0E-06 GAAATGGGGAACTGACA 17 V_SPI1_01_M01203 TRANSFAC + 36314057 36314073 5.0E-06 CAAAAGGGGAAGGATTG 17 V_USF_Q6_M00187 TRANSFAC + 36311003 36311012 2.0E-06 GTCACGTGGC 10 V_EBF_Q6_M00977 TRANSFAC - 36310486 36310496 8.0E-06 TTCCCTTGAGG 11 V_CEBP_Q3_M00770 TRANSFAC + 36310553 36310564 4.0E-06 TAATTGTGCAAT 12 V_HMGIY_Q3_M01010 TRANSFAC - 36314005 36314019 8.0E-06 AAGGTATTTTTATTA 15 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 36310746 36310757 4.0E-06 ACTTTTTAAAAG 12 V_COE1_Q6_M01871 TRANSFAC + 36310486 36310499 4.0E-06 CCTCAAGGGAACAT 14 V_MMEF2_Q6_M00405 TRANSFAC + 36314003 36314018 5.0E-06 AATAATAAAAATACCT 16 V_SPIB_02_M02041 TRANSFAC - 36313956 36313965 2.0E-06 AGGGGAAGTA 10 V_EBOX_Q6_01_M01034 TRANSFAC - 36311002 36311011 2.0E-06 CCACGTGACC 10 V_ARNT_01_M00236 TRANSFAC + 36311000 36311015 9.0E-06 GAGGTCACGTGGCTGT 16 V_CEBP_Q2_M00190 TRANSFAC - 36310553 36310566 2.0E-06 GCATTGCACAATTA 14 V_YY1_Q6_M00793 TRANSFAC + 36310958 36310966 7.0E-06 GCCATCTTG 9 V_PU1_Q4_M01172 TRANSFAC - 36310585 36310603 4.0E-06 CGTTGTCAGTTCCCCATTT 19 V_PU1_Q4_M01172 TRANSFAC + 36313950 36313968 3.0E-06 GCAAATTACTTCCCCTCTT 19 V_HOXD13_01_M01404 TRANSFAC + 36314001 36314016 6.0E-06 ACAATAATAAAAATAC 16 V_SOX21_03_M02803 TRANSFAC + 36314000 36314015 4.0E-06 AACAATAATAAAAATA 16 V_SOX21_03_M02803 TRANSFAC - 36314000 36314015 2.0E-06 TATTTTTATTATTGTT 16 V_MEF2A_Q6_M02024 TRANSFAC - 36314006 36314015 8.0E-06 TATTTTTATT 10 V_STAT4_Q4_M01666 TRANSFAC - 36311375 36311388 3.0E-06 TTCCAAGAAGCCCG 14 V_SPIC_01_M02042 TRANSFAC - 36313956 36313965 5.0E-06 AGGGGAAGTA 10 V_SOX13_03_M02797 TRANSFAC - 36310732 36310747 8.0E-06 GTAAGAACAAAATATC 16 V_SOX13_03_M02797 TRANSFAC + 36313995 36314010 1.0E-06 ATGGGAACAATAATAA 16 V_SOX7_03_M02807 TRANSFAC + 36313993 36314014 3.0E-06 AAATGGGAACAATAATAAAAAT 22 V_FOXA2_02_M02853 TRANSFAC + 36314000 36314014 4.0E-06 AACAATAATAAAAAT 15 V_SPI1_03_M02078 TRANSFAC - 36313956 36313965 6.0E-06 AGGGGAAGTA 10 V_PR_01_M00954 TRANSFAC + 36310724 36310750 2.0E-06 GTCAAAACGATATTTTGTTCTTACTTT 27 V_HOXB13_01_M01467 TRANSFAC + 36314001 36314016 5.0E-06 ACAATAATAAAAATAC 16 V_SOX1_04_M02906 TRANSFAC - 36313996 36314010 6.0E-06 TTATTATTGTTCCCA 15 V_CEBPD_Q6_M00621 TRANSFAC + 36310546 36310557 1.0E-06 AATTTCTTAATT 12 V_CEBPD_Q6_M00621 TRANSFAC - 36310554 36310565 5.0E-06 CATTGCACAATT 12 V_CEBPD_Q6_M00621 TRANSFAC + 36313977 36313988 1.0E-06 AATTTCATCATC 12 V_CEBPB_02_M00117 TRANSFAC - 36310553 36310566 6.0E-06 GCATTGCACAATTA 14 V_AMEF2_Q6_M00403 TRANSFAC + 36314003 36314020 2.0E-06 AATAATAAAAATACCTTT 18 V_HOXB9_01_M01426 TRANSFAC + 36314001 36314016 3.0E-06 ACAATAATAAAAATAC 16 V_FOXK1_04_M02856 TRANSFAC + 36314001 36314015 1.0E-05 ACAATAATAAAAATA 15 V_CDX2_01_M01449 TRANSFAC + 36314000 36314015 1.0E-06 AACAATAATAAAAATA 16 V_NKX25_02_M00241 TRANSFAC + 36310551 36310558 7.0E-06 CTTAATTG 8 V_PAX2_01_M00098 TRANSFAC - 36313980 36313998 9.0E-06 CCATTTTACGGATGATGAA 19 V_HNF1_Q6_01_M01011 TRANSFAC - 36310739 36310759 5.0E-06 AGCTTTTAAAAAGTAAGAACA 21 V_SOX18_03_M02801 TRANSFAC - 36313994 36314009 4.0E-06 TATTATTGTTCCCATT 16 V_CDX1_01_M01373 TRANSFAC + 36314000 36314015 1.0E-06 AACAATAATAAAAATA 16 V_REX1_03_M01744 TRANSFAC - 36310954 36310965 0.0E+00 AAGATGGCTGCC 12 V_USF_01_M00121 TRANSFAC + 36311001 36311014 9.0E-06 AGGTCACGTGGCTG 14 V_USF_01_M00121 TRANSFAC - 36311001 36311014 9.0E-06 CAGCCACGTGACCT 14 V_PPARG_03_M00528 TRANSFAC - 36314045 36314061 8.0E-06 TTTTGGGGTATAAGTCA 17 V_SPIB_01_M01204 TRANSFAC + 36310584 36310600 2.0E-06 GAAATGGGGAACTGACA 17 V_TAXCREB_02_M00115 TRANSFAC + 36314044 36314058 6.0E-06 ATGACTTATACCCCA 15 V_STAT3_03_M01595 TRANSFAC + 36311378 36311393 9.0E-06 GCTTCTTGGAATTGAC 16 V_CTCF_01_M01200 TRANSFAC + 36314020 36314039 6.0E-06 TTGGCCATTAGGGGGAGCTC 20 V_GLI3_01_M01596 TRANSFAC + 36311256 36311266 9.0E-06 GTGGGTGGGCT 11 V_PTF1BETA_Q6_M00657 TRANSFAC + 36310589 36310602 7.0E-06 GGGGAACTGACAAC 14 V_USF_Q6_01_M00796 TRANSFAC - 36311002 36311013 2.0E-06 AGCCACGTGACC 12 V_HBP1_04_M02866 TRANSFAC - 36313987 36314003 2.0E-06 TGTTCCCATTTTACGGA 17 V_SOX15_03_M02799 TRANSFAC + 36313995 36314011 5.0E-06 ATGGGAACAATAATAAA 17 V_MTF1_06_M02882 TRANSFAC + 36314002 36314015 0.0E+00 CAATAATAAAAATA 14 V_MAZR_01_M00491 TRANSFAC - 36310890 36310902 6.0E-06 AGGGGTGGGGACA 13 V_TFEB_01_M01768 TRANSFAC + 36310972 36310981 8.0E-06 GTCACATGAC 10 V_TFEB_01_M01768 TRANSFAC - 36310972 36310981 8.0E-06 GTCATGTGAC 10 V_ZBTB12_03_M02824 TRANSFAC - 36311140 36311156 6.0E-06 CTTTGGTTCTAGAGTCT 17 V_ASCL2_04_M02841 TRANSFAC + 36310889 36310904 4.0E-06 CTGTCCCCACCCCTTC 16 V_SPIC_02_M02077 TRANSFAC - 36313956 36313965 9.0E-06 AGGGGAAGTA 10 V_PLZF_02_M01075 TRANSFAC - 36313909 36313937 1.0E-05 GGAGTTGGAAACTGAACCTAGGTCTTTTC 29 V_SOX8_03_M02808 TRANSFAC - 36313995 36314011 6.0E-06 TTTATTATTGTTCCCAT 17 V_STAT5A_01_M00457 TRANSFAC + 36311377 36311391 8.0E-06 GGCTTCTTGGAATTG 15 V_STAT5A_01_M00457 TRANSFAC - 36311377 36311391 7.0E-06 CAATTCCAAGAAGCC 15 V_PR_02_M00957 TRANSFAC + 36310724 36310750 4.0E-06 GTCAAAACGATATTTTGTTCTTACTTT 27 V_SOX12_03_M02796 TRANSFAC - 36313994 36314007 2.0E-06 TTATTGTTCCCATT 14 V_PIT1_Q6_M00802 TRANSFAC + 36310547 36310564 6.0E-06 ATTTCTTAATTGTGCAAT 18 V_MEF2A_05_M01301 TRANSFAC - 36314007 36314018 2.0E-06 AGGTATTTTTAT 12 V_HMEF2_Q6_M00406 TRANSFAC + 36314005 36314020 3.0E-06 TAATAAAAATACCTTT 16 V_TFE_Q6_M01029 TRANSFAC - 36310973 36310980 1.0E-05 TCATGTGA 8 V_CEBP_Q2_01_M00912 TRANSFAC - 36310553 36310564 0.0E+00 ATTGCACAATTA 12 V_HOXA10_01_M01464 TRANSFAC + 36314001 36314016 7.0E-06 ACAATAATAAAAATAC 16 V_CEBPE_01_M01772 TRANSFAC + 36310555 36310564 4.0E-06 ATTGTGCAAT 10 V_GLIS2_04_M02863 TRANSFAC + 36314000 36314013 8.0E-06 AACAATAATAAAAA 14 V_SPI1_02_M02043 TRANSFAC - 36313956 36313965 3.0E-06 AGGGGAAGTA 10 V_SOX14_03_M02798 TRANSFAC + 36314000 36314015 8.0E-06 AACAATAATAAAAATA 16 V_CEBPA_Q6_M01866 TRANSFAC + 36310553 36310565 0.0E+00 TAATTGTGCAATG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.