Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DBNL Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 28988 drebrin-like chr7 + 44079238 - 44084738 44084238 Transcription Factor Binding Sites   Download all TFBS in the DBNL promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MESP1_bHLH_DBD_dimeric_10_1 SELEX + 44080366 44080375 5.0E-06 AACACCTGCG 10 Pax5_MA0014.1 JASPAR - 44086552 44086571 3.0E-06 AGGACTCTGAAGAGGAACCA 20 NF-kappaB_MA0061.1 JASPAR + 44084770 44084779 6.0E-06 GGGACTTCCC 10 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 44086301 44086315 9.0E-06 CCATTAAGGTAGTTA 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 44086301 44086315 8.0E-06 TAACTACCTTAATGG 15 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 44084264 44084275 8.0E-06 TGACAGCCGACA 12 ETV2_ETS_DBD_monomeric_11_1 SELEX - 44084212 44084222 7.0E-06 AAGCGGAAATG 11 ETV2_ETS_DBD_monomeric_11_1 SELEX - 44084238 44084248 7.0E-06 AACCGGAAACC 11 ELF3_ETS_full_monomeric_13_1 SELEX - 44086373 44086385 3.0E-06 GACACGGAAGTGA 13 TCF4_bHLH_full_dimeric_10_1 SELEX + 44086499 44086508 5.0E-06 CACACCTGTT 10 SP1_MA0079.2 JASPAR - 44083606 44083615 9.0E-06 CCCCTCCTCC 10 ELK1_MA0028.1 JASPAR - 44084240 44084249 6.0E-06 CAACCGGAAA 10 ELF5_ETS_full_monomeric_11_1 SELEX - 44086374 44086384 7.0E-06 ACACGGAAGTG 11 ELF3_ETS_DBD_monomeric_12_1 SELEX - 44086374 44086385 8.0E-06 GACACGGAAGTG 12 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 44084263 44084276 3.0E-06 TTGACAGCCGACAA 14 ETV6_ETS_full_dimeric_15_1 SELEX - 44084212 44084226 0.0E+00 CAGGAAGCGGAAATG 15 SNAI2_C2H2_DBD_monomeric_9_1 SELEX - 44086500 44086508 3.0E-06 AACAGGTGT 9 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 44084264 44084275 8.0E-06 TGACAGCCGACA 12 TCF3_bHLH_DBD_dimeric_10_1 SELEX + 44080366 44080375 7.0E-06 AACACCTGCG 10 V_NFKB_C_M00208 TRANSFAC + 44084769 44084780 9.0E-06 TGGGACTTCCCT 12 V_ER_Q6_02_M00959 TRANSFAC + 44080399 44080409 3.0E-06 GAGGTCACGGT 11 V_FLI1_Q6_M01208 TRANSFAC - 44086372 44086382 8.0E-06 ACGGAAGTGAC 11 V_CEBP_Q3_M00770 TRANSFAC + 44084833 44084844 7.0E-06 TTTTTTTGCAAA 12 V_ETS_B_M00340 TRANSFAC - 44086397 44086410 3.0E-06 AACAGGAAGCCACT 14 V_MAFB_03_M02879 TRANSFAC - 44084832 44084846 0.0E+00 CGTTTGCAAAAAAAC 15 V_SP1_Q6_01_M00931 TRANSFAC + 44084231 44084240 7.0E-06 GGGGCGGGGT 10 V_SP1_03_M02281 TRANSFAC - 44083606 44083615 9.0E-06 CCCCTCCTCC 10 V_STAT4_Q4_M01666 TRANSFAC + 44083924 44083937 3.0E-06 TTCAAATAAGCGCA 14 V_MAZ_Q6_01_M02023 TRANSFAC + 44083606 44083619 7.0E-06 GGAGGAGGGGAGCA 14 V_AP2BETA_Q3_M01858 TRANSFAC + 44080338 44080353 5.0E-06 GCCTCGGTCTGCGGGC 16 V_MAFK_Q3_M02022 TRANSFAC + 44086313 44086323 7.0E-06 TTACTCAGCAG 11 V_SP1_01_M00008 TRANSFAC + 44084231 44084240 3.0E-06 GGGGCGGGGT 10 V_BLIMP1_Q6_M01066 TRANSFAC + 44084886 44084901 7.0E-06 CGGGCTGTGAATGTGA 16 V_GCNF_01_M00526 TRANSFAC + 44080396 44080413 9.0E-06 GAGGAGGTCACGGTCAGC 18 V_HIF1_Q3_M00797 TRANSFAC + 44084379 44084392 2.0E-06 GCCTACGTGCGGGT 14 V_EHF_06_M02745 TRANSFAC - 44086373 44086387 8.0E-06 CAGACACGGAAGTGA 15 V_E47_01_M00002 TRANSFAC - 44080363 44080377 8.0E-06 CACGCAGGTGTTCCG 15 V_PLZF_02_M01075 TRANSFAC - 44083939 44083967 2.0E-06 CTTATTCTTTTCTAAATCTTGTTATGTCG 29 V_NFKAPPAB_01_M00054 TRANSFAC + 44084770 44084779 7.0E-06 GGGACTTCCC 10 V_HIF1_Q5_M00466 TRANSFAC + 44084380 44084391 6.0E-06 CCTACGTGCGGG 12 V_DMRT1_01_M01146 TRANSFAC + 44086321 44086335 5.0E-06 CAGATACTATGTGGC 15 V_NANOG_02_M01247 TRANSFAC + 44083952 44083971 8.0E-06 TTTAGAAAAGAATAAGCACG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.