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C9orf142 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 286257 chromosome 9 open reading frame 142 chr9 + 139881869 - 139887369 139886869 Transcription Factor Binding Sites   Download all TFBS in the C9orf142 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 139884977 139884990 8.0E-06 GTAAATAAGTGTAT 14 Foxa2_MA0047.2 JASPAR + 139884852 139884863 7.0E-06 TGTTTATTCAGT 12 TBX1_TBX_DBD_dimeric_20_2 SELEX - 139884765 139884784 7.0E-06 GTCTGACTTATGTGTGTGAA 20 NHLH1_MA0048.1 JASPAR - 139890940 139890951 8.0E-06 ACTCAGCTGCGG 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 139884850 139884861 5.0E-06 TGAATAAACATT 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 139884851 139884861 8.0E-06 TGAATAAACAT 11 NFYA_MA0060.1 JASPAR - 139887279 139887294 4.0E-06 CCTAGCCAATGGGAGG 16 Foxq1_MA0040.1 JASPAR + 139884849 139884859 1.0E-06 CAATGTTTATT 11 SP1_MA0079.2 JASPAR + 139886731 139886740 7.0E-06 CCCCGCCCCC 10 znf143_MA0088.1 JASPAR + 139887231 139887250 7.0E-06 GATTCCCCAGAAGGCTCTGA 20 SP4_C2H2_full_monomeric_17_1 SELEX + 139886696 139886712 5.0E-06 ATAACCCCGCCCCTAAC 17 SP4_C2H2_full_monomeric_17_1 SELEX + 139886727 139886743 3.0E-06 CAGACCCCGCCCCCAAC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 139886730 139886740 4.0E-06 ACCCCGCCCCC 11 Foxd3_MA0041.1 JASPAR + 139884849 139884860 8.0E-06 CAATGTTTATTC 12 ELK1_MA0028.1 JASPAR - 139886342 139886351 5.0E-06 AAACCGGAAG 10 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 139891177 139891187 8.0E-06 ACCCTCAGGCT 11 Myf_MA0055.1 JASPAR + 139890969 139890980 6.0E-06 AAACAGCTGGAG 12 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 139884977 139884990 5.0E-06 ATACACTTATTTAC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 139884977 139884990 8.0E-06 GTAAATAAGTGTAT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 139884977 139884990 3.0E-06 ATACACTTATTTAC 14 V_HNF3B_01_M00131 TRANSFAC + 139884847 139884861 5.0E-06 CACAATGTTTATTCA 15 V_NFKB_C_M00208 TRANSFAC + 139887228 139887239 9.0E-06 TGGGATTCCCCA 12 V_KLF15_Q2_M01714 TRANSFAC - 139887181 139887194 8.0E-06 AAGGAGGGGTGTGG 14 V_FREAC7_01_M00293 TRANSFAC - 139884848 139884863 7.0E-06 ACTGAATAAACATTGT 16 V_ELK1_04_M01165 TRANSFAC - 139886340 139886350 5.0E-06 AACCGGAAGCT 11 V_BACH2_01_M00490 TRANSFAC + 139886289 139886299 2.0E-06 CGTGAGTCACC 11 V_XFD1_01_M00267 TRANSFAC - 139884848 139884861 3.0E-06 TGAATAAACATTGT 14 V_SOX14_05_M02902 TRANSFAC - 139884876 139884890 0.0E+00 CTTACACAATGGCTG 15 V_ZFP410_04_M02936 TRANSFAC + 139886668 139886684 9.0E-06 TAGCCCCGCCCCGAATC 17 V_ZFP410_04_M02936 TRANSFAC + 139886697 139886713 2.0E-06 TAACCCCGCCCCTAACC 17 V_MTF1_Q4_M00650 TRANSFAC + 139891054 139891067 7.0E-06 TGTGCGCCCCGCCC 14 V_FOXD3_01_M00130 TRANSFAC + 139884849 139884860 5.0E-06 CAATGTTTATTC 12 V_ETS_B_M00340 TRANSFAC - 139890915 139890928 8.0E-06 GGGAGGAAGCGCTT 14 V_SP1_Q6_01_M00931 TRANSFAC - 139886670 139886679 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 139886699 139886708 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC - 139886730 139886739 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC - 139886838 139886847 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 139886861 139886870 4.0E-06 GGGGCGGGGC 10 V_TBR2_01_M01774 TRANSFAC - 139890546 139890554 8.0E-06 ATGTGTGAA 9 V_ZFP740_03_M02834 TRANSFAC + 139884824 139884839 4.0E-06 CCACCACCCCCCATTC 16 V_HNF3_Q6_01_M01012 TRANSFAC + 139884847 139884864 3.0E-06 CACAATGTTTATTCAGTG 18 V_SP1_03_M02281 TRANSFAC + 139886731 139886740 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 139886368 139886379 5.0E-06 GCCCCGCCCTTC 12 V_GKLF_02_M01588 TRANSFAC + 139887180 139887191 4.0E-06 GCCACACCCCTC 12 V_PITX2_Q6_M02114 TRANSFAC - 139886277 139886286 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC + 139886437 139886447 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC - 139886729 139886739 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 139890509 139890519 5.0E-06 GGGGTGGGGTG 11 V_AP4_Q6_01_M00927 TRANSFAC + 139891135 139891143 6.0E-06 ACCAGCTGC 9 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 139890232 139890246 7.0E-06 GGGGGTCAGGGCTGG 15 V_NRSE_B_M00325 TRANSFAC + 139886393 139886413 4.0E-06 CGCAGAGCCACGGAGGGAACC 21 V_WT1_Q6_01_M02036 TRANSFAC - 139886439 139886448 4.0E-06 CGCCCCCGCC 10 V_TAL1_Q6_M00993 TRANSFAC - 139890970 139890979 7.0E-06 TCCAGCTGTT 10 V_GC_01_M00255 TRANSFAC + 139886541 139886554 8.0E-06 TGGGGGCAGGGCCT 14 V_GC_01_M00255 TRANSFAC - 139886697 139886710 3.0E-06 TAGGGGCGGGGTTA 14 V_GC_01_M00255 TRANSFAC - 139886728 139886741 2.0E-06 TGGGGGCGGGGTCT 14 V_GC_01_M00255 TRANSFAC - 139886836 139886849 1.0E-06 GAGGGGCGGGGCTG 14 V_MYF_01_M01302 TRANSFAC + 139890969 139890980 6.0E-06 AAACAGCTGGAG 12 V_FREAC3_01_M00291 TRANSFAC + 139884972 139884987 7.0E-06 GCAGGGTAAATAAGTG 16 V_KROX_Q6_M00982 TRANSFAC - 139886437 139886450 0.0E+00 CCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 139886732 139886745 1.0E-05 CCCGCCCCCAACCA 14 V_SP1_Q6_M00196 TRANSFAC - 139886669 139886681 8.0E-06 TCGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 139886698 139886710 5.0E-06 TAGGGGCGGGGTT 13 V_SP1_Q6_M00196 TRANSFAC - 139886729 139886741 2.0E-06 TGGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC - 139886837 139886849 2.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 139886860 139886872 5.0E-06 GCGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 139891058 139891070 9.0E-06 GGAGGGCGGGGCG 13 V_RXRA_04_M02895 TRANSFAC + 139884846 139884861 4.0E-06 TCACAATGTTTATTCA 16 V_HNF3_Q6_M00791 TRANSFAC - 139884850 139884862 1.0E-06 CTGAATAAACATT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 139884852 139884862 9.0E-06 TGTTTATTCAG 11 V_EGR1_Q6_M01873 TRANSFAC + 139886440 139886449 4.0E-06 GCGGGGGCGG 10 V_SREBP_Q6_M01168 TRANSFAC - 139884951 139884965 5.0E-06 TCCATCACCCCAGGA 15 V_AR_04_M01201 TRANSFAC + 139891264 139891278 3.0E-06 GGTACTGAGTGTGCT 15 V_HBP1_03_M02762 TRANSFAC - 139884833 139884848 0.0E+00 TGAATGAATGAATGGG 16 V_HBP1_03_M02762 TRANSFAC - 139884837 139884852 0.0E+00 ATTGTGAATGAATGAA 16 V_SPIB_01_M01204 TRANSFAC - 139886337 139886353 3.0E-06 ACAAACCGGAAGCTTCC 17 V_XFD2_01_M00268 TRANSFAC - 139884848 139884861 2.0E-06 TGAATAAACATTGT 14 V_HFH1_01_M00129 TRANSFAC + 139884849 139884860 2.0E-06 CAATGTTTATTC 12 V_NKX3A_01_M00451 TRANSFAC + 139884979 139884990 2.0E-06 AAATAAGTGTAT 12 V_STAF_02_M00264 TRANSFAC + 139887232 139887252 9.0E-06 ATTCCCCAGAAGGCTCTGACA 21 V_PPARA_02_M00518 TRANSFAC - 139886686 139886704 1.0E-06 CGGGGTTATGAGGGTGGGG 19 V_BCL6B_04_M02844 TRANSFAC + 139886669 139886684 6.0E-06 AGCCCCGCCCCGAATC 16 V_BCL6B_04_M02844 TRANSFAC + 139886698 139886713 2.0E-06 AACCCCGCCCCTAACC 16 V_NEUROD_02_M01288 TRANSFAC - 139890969 139890980 9.0E-06 CTCCAGCTGTTT 12 V_SP4_Q5_M01273 TRANSFAC - 139886436 139886446 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 139886670 139886680 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 139886838 139886848 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 139886861 139886871 2.0E-06 GCCCCGCCCCG 11 V_HFH8_01_M00294 TRANSFAC + 139884849 139884861 1.0E-06 CAATGTTTATTCA 13 V_T3R_01_M00239 TRANSFAC - 139891184 139891199 4.0E-06 CCCTGAGGTCACACCC 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 139886687 139886695 8.0E-06 GAGGGTGGG 9 V_NFY_01_M00287 TRANSFAC - 139887279 139887294 5.0E-06 CCTAGCCAATGGGAGG 16 V_FOXA2_03_M02260 TRANSFAC + 139884852 139884863 7.0E-06 TGTTTATTCAGT 12 V_PITX2_Q2_M00482 TRANSFAC - 139886276 139886286 1.0E-06 TGTAATCCCAG 11 V_ZFP281_01_M01597 TRANSFAC - 139886731 139886741 6.0E-06 TGGGGGCGGGG 11 V_FOXJ2_01_M00422 TRANSFAC - 139884847 139884864 8.0E-06 CACTGAATAAACATTGTG 18 V_DR3_Q4_M00966 TRANSFAC - 139884971 139884991 4.0E-06 AATACACTTATTTACCCTGCT 21 V_SP1_Q2_01_M00933 TRANSFAC + 139886700 139886709 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 139886731 139886740 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 139886839 139886848 7.0E-06 CCCCGCCCCT 10 V_NFYA_Q5_M02106 TRANSFAC - 139887279 139887292 4.0E-06 TAGCCAATGGGAGG 14 V_SP1_Q4_01_M00932 TRANSFAC - 139886729 139886741 5.0E-06 TGGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC - 139886837 139886849 3.0E-06 GAGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 139886860 139886872 9.0E-06 GCGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 139891058 139891070 9.0E-06 GGAGGGCGGGGCG 13 V_SREBP1_Q5_M01173 TRANSFAC - 139884951 139884965 3.0E-06 TCCATCACCCCAGGA 15 V_AR_01_M00481 TRANSFAC + 139891264 139891278 5.0E-06 GGTACTGAGTGTGCT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.