Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZFP41 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 286128 ZFP41 zinc finger protein chr8 + 144323990 - 144329597 144329097 Transcription Factor Binding Sites   Download all TFBS in the ZFP41 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX - 144330344 144330354 5.0E-06 AATGACTCACT 11 Tp53_p53l_DBD_dimeric_18_1 SELEX - 144329899 144329916 5.0E-06 ACAGGCCTGTAGACAGGA 18 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 144328643 144328653 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 144328779 144328789 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 144328960 144328970 1.0E-05 GCCCCGCCCCC 11 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 144329884 144329897 6.0E-06 TAACTAGCTAATCA 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 144329884 144329897 4.0E-06 TGATTAGCTAGTTA 14 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 144328777 144328790 9.0E-06 TGCCCCGCCCCCTC 14 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 144328896 144328909 8.0E-06 GACCCCGCCCCTTT 14 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 144328958 144328971 9.0E-06 GGCCCCGCCCCCTC 14 POU6F2_POU_DBD_dimeric_16_1 SELEX - 144329883 144329898 7.0E-06 GTGATTAGCTAGTTAC 16 SP1_MA0079.2 JASPAR - 144328643 144328652 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 144328779 144328788 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 144328960 144328969 7.0E-06 CCCCGCCCCC 10 znf143_MA0088.1 JASPAR - 144328783 144328802 4.0E-06 GGCTTCCCCTCATGCCCCGC 20 SP4_C2H2_full_monomeric_17_1 SELEX - 144328640 144328656 6.0E-06 CATGCCCCGCCCCCAGC 17 SP4_C2H2_full_monomeric_17_1 SELEX - 144328776 144328792 1.0E-06 CATGCCCCGCCCCCTCA 17 SP4_C2H2_full_monomeric_17_1 SELEX - 144328895 144328911 1.0E-06 CTGACCCCGCCCCTTTA 17 SP4_C2H2_full_monomeric_17_1 SELEX - 144328957 144328973 0.0E+00 CAGGCCCCGCCCCCTCA 17 Mycn_MA0104.2 JASPAR - 144328241 144328250 3.0E-06 ACCACGTGGC 10 Foxd3_MA0041.1 JASPAR + 144330307 144330318 5.0E-06 AAATATTTTATT 12 EN1_homeodomain_full_dimeric_14_1 SELEX - 144329884 144329897 2.0E-06 TGATTAGCTAGTTA 14 FEV_MA0156.1 JASPAR - 144329109 144329116 1.0E-05 CAGGAAAT 8 JDP2_bZIP_full_dimeric_9_1 SELEX - 144330345 144330353 7.0E-06 ATGACTCAC 9 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 144329884 144329897 4.0E-06 TAACTAGCTAATCA 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 144329884 144329897 8.0E-06 TGATTAGCTAGTTA 14 Zfx_MA0146.1 JASPAR + 144328960 144328973 8.0E-06 GGGGGCGGGGCCTG 14 RXR_RAR_DR5_MA0159.1 JASPAR + 144329093 144329109 5.0E-06 GGGTCAGCGGGCGGGCA 17 V_AP2ALPHA_Q6_M01857 TRANSFAC + 144329195 144329205 3.0E-06 TGCCTCCGGCC 11 V_AP2ALPHA_Q6_M01857 TRANSFAC + 144329336 144329346 3.0E-06 CGCCTCCGGCC 11 V_STAT5A_Q6_M01890 TRANSFAC - 144330300 144330312 7.0E-06 ATATTTCTTAAAA 13 V_DBX1_01_M01483 TRANSFAC - 144330303 144330319 5.0E-06 AAATAAAATATTTCTTA 17 V_ZFX_01_M01593 TRANSFAC - 144328318 144328333 3.0E-06 CTCCAGGCCGCGGGCC 16 V_FOXD3_01_M00130 TRANSFAC + 144330307 144330318 4.0E-06 AAATATTTTATT 12 V_BCL6_01_M01183 TRANSFAC + 144330299 144330314 3.0E-06 CTTTTAAGAAATATTT 16 V_BCL6_01_M01183 TRANSFAC + 144330300 144330315 0.0E+00 TTTTAAGAAATATTTT 16 V_HOXA3_01_M00395 TRANSFAC - 144327761 144327769 4.0E-06 CCTAATTGT 9 V_HOXA13_02_M01297 TRANSFAC - 144330311 144330319 4.0E-06 AAATAAAAT 9 V_SP1_Q6_01_M00931 TRANSFAC + 144328629 144328638 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328644 144328653 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328670 144328679 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328780 144328789 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328899 144328908 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328961 144328970 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 144328977 144328986 7.0E-06 GGGGCGGGGT 10 V_AP2_Q6_01_M00915 TRANSFAC - 144328705 144328717 0.0E+00 CCGCCCCCAGGCT 13 V_SP1_03_M02281 TRANSFAC - 144328643 144328652 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 144328779 144328788 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 144328960 144328969 7.0E-06 CCCCGCCCCC 10 V_SP1_02_M01303 TRANSFAC + 144328899 144328909 8.0E-06 GGGGCGGGGTC 11 V_SP1_02_M01303 TRANSFAC + 144328977 144328987 8.0E-06 GGGGCGGGGTC 11 V_CMYC_02_M01154 TRANSFAC + 144328240 144328251 9.0E-06 GGCCACGTGGTG 12 V_BARBIE_01_M00238 TRANSFAC - 144330292 144330306 8.0E-06 CTTAAAAGCAGAGTG 15 V_AP1_Q6_M00174 TRANSFAC - 144330344 144330354 3.0E-06 AATGACTCACT 11 V_ETS_Q4_M00771 TRANSFAC - 144328164 144328175 4.0E-06 CTCCACTTCCTG 12 V_BACH1_01_M00495 TRANSFAC + 144330342 144330356 7.0E-06 GAAGTGAGTCATTCC 15 V_GC_01_M00255 TRANSFAC + 144328642 144328655 6.0E-06 TGGGGGCGGGGCAT 14 V_GC_01_M00255 TRANSFAC + 144328668 144328681 3.0E-06 TCGGGGCGGGGCTT 14 V_GC_01_M00255 TRANSFAC + 144328696 144328709 5.0E-06 ATGGGGCGGAGCCT 14 V_GC_01_M00255 TRANSFAC + 144328778 144328791 4.0E-06 AGGGGGCGGGGCAT 14 V_GC_01_M00255 TRANSFAC + 144328897 144328910 5.0E-06 AAGGGGCGGGGTCA 14 V_GC_01_M00255 TRANSFAC + 144328959 144328972 0.0E+00 AGGGGGCGGGGCCT 14 V_SP4_03_M02810 TRANSFAC - 144328774 144328790 7.0E-06 TGCCCCGCCCCCTCAGG 17 V_SP4_03_M02810 TRANSFAC - 144328955 144328971 7.0E-06 GGCCCCGCCCCCTCAGG 17 V_KROX_Q6_M00982 TRANSFAC - 144328406 144328419 9.0E-06 CCAGCCCCCGCCTC 14 V_AP1_Q4_M00188 TRANSFAC - 144330344 144330354 7.0E-06 AATGACTCACT 11 V_SP1_Q6_M00196 TRANSFAC + 144328627 144328639 4.0E-06 GCGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 144328642 144328654 9.0E-06 TGGGGGCGGGGCA 13 V_SP1_Q6_M00196 TRANSFAC + 144328668 144328680 8.0E-06 TCGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC + 144328778 144328790 4.0E-06 AGGGGGCGGGGCA 13 V_SP1_Q6_M00196 TRANSFAC + 144328897 144328909 2.0E-06 AAGGGGCGGGGTC 13 V_SP1_Q6_M00196 TRANSFAC + 144328959 144328971 0.0E+00 AGGGGGCGGGGCC 13 MYC_MAX_MA0059.1 JASPAR + 144328240 144328250 6.0E-06 GGCCACGTGGT 11 V_JUNDM2_04_M02876 TRANSFAC - 144330342 144330357 8.0E-06 TGGAATGACTCACTTC 16 V_TEL2_Q6_M00678 TRANSFAC - 144328164 144328173 6.0E-06 CCACTTCCTG 10 V_KLF7_03_M02773 TRANSFAC - 144328896 144328911 0.0E+00 CTGACCCCGCCCCTTT 16 V_KLF7_03_M02773 TRANSFAC - 144328974 144328989 9.0E-06 AAGACCCCGCCCCGAT 16 V_MYCN_01_M02259 TRANSFAC - 144328241 144328250 3.0E-06 ACCACGTGGC 10 V_SP3_Q3_M00665 TRANSFAC + 144328862 144328875 0.0E+00 AGCCTTCGGGAGGG 14 V_SP1_01_M00008 TRANSFAC + 144328899 144328908 3.0E-06 GGGGCGGGGT 10 V_SP1_01_M00008 TRANSFAC + 144328977 144328986 3.0E-06 GGGGCGGGGT 10 V_SP4_Q5_M01273 TRANSFAC - 144328628 144328638 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 144328643 144328653 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 144328669 144328679 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 144328779 144328789 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 144328960 144328970 1.0E-06 GCCCCGCCCCC 11 V_AP1_Q4_01_M00926 TRANSFAC + 144330346 144330353 1.0E-05 TGAGTCAT 8 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 144327844 144327852 8.0E-06 GAGGGTGGG 9 V_FRA1_Q5_M01267 TRANSFAC + 144330346 144330353 1.0E-05 TGAGTCAT 8 V_ASCL2_04_M02841 TRANSFAC - 144328896 144328911 4.0E-06 CTGACCCCGCCCCTTT 16 V_ZFP281_01_M01597 TRANSFAC + 144328642 144328652 6.0E-06 TGGGGGCGGGG 11 V_EGR1_06_M02744 TRANSFAC - 144328774 144328787 7.0E-06 CCCGCCCCCTCAGG 14 V_EGR1_06_M02744 TRANSFAC - 144328955 144328968 7.0E-06 CCCGCCCCCTCAGG 14 V_RXR_RAR_01_M02272 TRANSFAC + 144329093 144329109 5.0E-06 GGGTCAGCGGGCGGGCA 17 V_SP1_Q2_01_M00933 TRANSFAC - 144328643 144328652 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 144328779 144328788 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 144328898 144328907 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 144328960 144328969 4.0E-06 CCCCGCCCCC 10 V_HOXA10_01_M01464 TRANSFAC - 144330308 144330323 8.0E-06 TGAGAAATAAAATATT 16 V_SP1_Q4_01_M00932 TRANSFAC + 144328627 144328639 6.0E-06 GCGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 144328642 144328654 9.0E-06 TGGGGGCGGGGCA 13 V_SP1_Q4_01_M00932 TRANSFAC + 144328778 144328790 1.0E-06 AGGGGGCGGGGCA 13 V_SP1_Q4_01_M00932 TRANSFAC + 144328897 144328909 1.0E-06 AAGGGGCGGGGTC 13 V_SP1_Q4_01_M00932 TRANSFAC + 144328959 144328971 0.0E+00 AGGGGGCGGGGCC 13 V_RNF96_01_M01199 TRANSFAC + 144328319 144328328 7.0E-06 GCCCGCGGCC 10 V_FEV_01_M02269 TRANSFAC - 144329109 144329116 1.0E-05 CAGGAAAT 8 V_DEC_Q1_M00997 TRANSFAC - 144329463 144329475 8.0E-06 GCCCACGTGCAGA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.