Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARL10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 285598 ADP-ribosylation factor-like 10 chr5 + 175787501 - 175793001 175792501 Transcription Factor Binding Sites   Download all TFBS in the ARL10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF713_C2H2_full_monomeric_17_1 SELEX + 175789051 175789067 8.0E-06 AAAATGACACCCACAAA 17 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 175788472 175788484 2.0E-06 ATGAAGGGTTAAG 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 175789121 175789132 5.0E-06 GTTTTTCCCACT 12 EBF1_MA0154.1 JASPAR + 175788570 175788579 5.0E-06 CCCCAAGGGA 10 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 175788882 175788897 1.0E-05 ACCCGCCCCCTCCCCA 16 znf143_MA0088.1 JASPAR - 175792429 175792448 4.0E-06 CAAGCCCCACAATGCACTGC 20 SP4_C2H2_full_monomeric_17_1 SELEX - 175788494 175788510 6.0E-06 CAAGCCACTCCCCTCTC 17 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 175788846 175788861 3.0E-06 CTCCCAGCATGCCCTG 16 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 175792430 175792445 4.0E-06 GCCCCACAATGCACTG 16 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 175789072 175789084 9.0E-06 AGCCCTCAAGGCT 13 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 175789123 175789139 3.0E-06 TTTTCCCACTTCACGGA 17 PPARG_MA0066.1 JASPAR + 175788735 175788754 3.0E-06 GAAGGTCCCCAAGACCCACT 20 TP53_MA0106.1 JASPAR + 175788846 175788865 5.0E-06 CAGGGCATGCTGGGAGTTGT 20 Zfx_MA0146.1 JASPAR + 175792758 175792771 0.0E+00 CGGGCCGAGGCCTG 14 V_ZFX_01_M01593 TRANSFAC - 175792759 175792774 0.0E+00 CCGCAGGCCTCGGCCC 16 V_PAX4_03_M00378 TRANSFAC - 175793107 175793118 7.0E-06 CATCCCCACCCC 12 V_EGR_Q6_M00807 TRANSFAC + 175792473 175792483 1.0E-05 GTGGGCGCGGC 11 V_IRF3_05_M02767 TRANSFAC + 175789256 175789269 8.0E-06 AAAAAAGGGAACCG 14 V_LYF1_01_M00141 TRANSFAC - 175789208 175789216 3.0E-06 TTTGGGAGA 9 V_ETS_Q4_M00771 TRANSFAC + 175788981 175788992 7.0E-06 CACCACTTCCTC 12 V_GLI3_02_M01704 TRANSFAC - 175792855 175792865 7.0E-06 GACCCCCCAAG 11 V_SPI1_03_M02078 TRANSFAC - 175788984 175788993 4.0E-06 TGAGGAAGTG 10 V_STAF_01_M00262 TRANSFAC - 175788842 175788863 1.0E-06 AACTCCCAGCATGCCCTGTGCT 22 V_STAF_01_M00262 TRANSFAC - 175792426 175792447 4.0E-06 AAGCCCCACAATGCACTGCCGC 22 V_MRF2_01_M00454 TRANSFAC + 175788193 175788206 8.0E-06 CTTCACAATATACA 14 V_SP4_03_M02810 TRANSFAC + 175788880 175788896 2.0E-06 AGACCCGCCCCCTCCCC 17 V_KROX_Q6_M00982 TRANSFAC + 175788883 175788896 0.0E+00 CCCGCCCCCTCCCC 14 V_EVI1_01_M00078 TRANSFAC + 175789018 175789033 7.0E-06 TGACAAGCTAAGGGAA 16 V_HMX1_01_M00433 TRANSFAC + 175789098 175789107 5.0E-06 CAAGTGCGAG 10 V_NKX25_Q5_M01043 TRANSFAC + 175789126 175789135 6.0E-06 TCCCACTTCA 10 V_SFPI1_04_M02896 TRANSFAC + 175789255 175789268 5.0E-06 CAAAAAAGGGAACC 14 V_SP1SP3_Q4_M01219 TRANSFAC + 175788884 175788894 1.0E-06 CCGCCCCCTCC 11 V_TAL1BETAE47_01_M00065 TRANSFAC - 175788589 175788604 3.0E-06 GTGAACAGATGGCGGG 16 V_EBF1_01_M02267 TRANSFAC + 175788570 175788579 5.0E-06 CCCCAAGGGA 10 V_SRF_03_M01304 TRANSFAC + 175789252 175789264 0.0E+00 AACCAAAAAAGGG 13 V_GLI3_Q5_01_M01657 TRANSFAC - 175792386 175792394 6.0E-06 GTGGGTGGT 9 V_TAL1BETAITF2_01_M00070 TRANSFAC - 175788589 175788604 3.0E-06 GTGAACAGATGGCGGG 16 V_GLI2_01_M01703 TRANSFAC - 175792855 175792865 1.0E-05 GACCCCCCAAG 11 V_CNOT3_01_M01253 TRANSFAC - 175792475 175792484 8.0E-06 GGCCGCGCCC 10 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 175788589 175788604 2.0E-06 GTGAACAGATGGCGGG 16 V_ZFP206_01_M01742 TRANSFAC - 175793082 175793092 1.0E-06 TGCGCAGGCGC 11 V_SPIC_02_M02077 TRANSFAC - 175788984 175788993 5.0E-06 TGAGGAAGTG 10 V_SIX4_01_M01374 TRANSFAC + 175789050 175789066 1.0E-06 TAAAATGACACCCACAA 17 V_SRF_02_M01257 TRANSFAC + 175789252 175789269 2.0E-06 AACCAAAAAAGGGAACCG 18 V_ZIC1_04_M02835 TRANSFAC - 175793099 175793112 5.0E-06 CACCCCCGGGCGGG 14 V_SPIB_03_M02076 TRANSFAC - 175788984 175788993 5.0E-06 TGAGGAAGTG 10 V_TCF11_01_M00285 TRANSFAC - 175789046 175789058 3.0E-06 GTCATTTTACTAT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.