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HTR3E Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 285242 5-hydroxytryptamine (serotonin) receptor 3E, ionotropic chr3 + 183809851 - 183818466 183817966 Transcription Factor Binding Sites   Download all TFBS in the HTR3E promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 183814868 183814879 8.0E-06 TGTTTATTTAAG 12 POU2F1_POU_DBD_dimeric_14_1 SELEX - 183819387 183819400 1.0E-06 CATAAAAATTCATA 14 DLX1_homeodomain_DBD_monomeric_10_1 SELEX + 183819381 183819390 4.0E-06 AATAATTATG 10 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 183819381 183819390 2.0E-06 CATAATTATT 10 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 183818959 183818976 5.0E-06 GCAGATCACTTGAGGTCA 18 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 183819778 183819794 1.0E-06 AAAAACAAAACAAAACA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 183814866 183814877 3.0E-06 TAAATAAACACA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 183814867 183814879 1.0E-06 CTTAAATAAACAC 13 TBP_MA0108.2 JASPAR - 183819167 183819181 7.0E-06 GTATATAAAGGGGAT 15 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 183818959 183818975 5.0E-06 CAGATCACTTGAGGTCA 17 FOXO1_forkhead_DBD_monomeric_8_1 SELEX + 183819193 183819200 7.0E-06 GTAAACAA 8 IRF7_IRF_DBD_trimeric_17_1 SELEX + 183819252 183819268 3.0E-06 AATAGGAAATTCTTTTG 17 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 183819368 183819379 1.0E-05 TAAACGAAGATA 12 Pax4_MA0068.1 JASPAR + 183819778 183819807 3.0E-06 AAAAACAAAACAAAACAAAACAAAAATCTA 30 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 183819379 183819392 7.0E-06 TTCATAATTATTAT 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 183819383 183819398 4.0E-06 TAAAAATTCATAATTA 16 HOXB5_homeodomain_DBD_monomeric_10_1 SELEX + 183819381 183819390 9.0E-06 AATAATTATG 10 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 183814640 183814657 7.0E-06 TTGAGCCCAGGAGGTCAA 18 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 183819383 183819398 4.0E-06 TAAAAATTCATAATTA 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 183814868 183814878 1.0E-06 TTAAATAAACA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 183819193 183819203 5.0E-06 GTAAACAAGCA 11 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 183818959 183818975 1.0E-05 CAGATCACTTGAGGTCA 17 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 183819387 183819400 8.0E-06 TATGAATTTTTATG 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 183819387 183819400 4.0E-06 CATAAAAATTCATA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 183819388 183819399 8.0E-06 ATGAATTTTTAT 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 183819388 183819399 4.0E-06 ATAAAAATTCAT 12 FOXI1_MA0042.1 JASPAR + 183814865 183814876 1.0E-06 TTGTGTTTATTT 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 183814868 183814878 0.0E+00 TTAAATAAACA 11 POU1F1_POU_DBD_monomeric_17_1 SELEX + 183819385 183819401 4.0E-06 ATTATGAATTTTTATGT 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 183819382 183819396 1.0E-05 ATAATTATGAATTTT 15 Foxd3_MA0041.1 JASPAR - 183814854 183814865 6.0E-06 ATTTGTTATTTT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 183819388 183819399 9.0E-06 ATGAATTTTTAT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 183819388 183819399 5.0E-06 ATAAAAATTCAT 12 FOXO3_forkhead_full_monomeric_8_1 SELEX + 183819193 183819200 7.0E-06 GTAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 183819382 183819393 3.0E-06 ATAATTATGAAT 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 183819382 183819393 5.0E-06 ATTCATAATTAT 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 183819388 183819399 7.0E-06 ATAAAAATTCAT 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 183814868 183814880 3.0E-06 GCTTAAATAAACA 13 RREB1_MA0073.1 JASPAR + 183819780 183819799 1.0E-06 AAACAAAACAAAACAAAACA 20 DLX5_homeodomain_FL_monomeric_8_1 SELEX + 183819382 183819389 4.0E-06 ATAATTAT 8 DLX5_homeodomain_FL_monomeric_8_1 SELEX - 183819382 183819389 4.0E-06 ATAATTAT 8 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 183819778 183819791 8.0E-06 AAAAACAAAACAAA 14 V_HOXA9_01_M01351 TRANSFAC - 183819389 183819405 2.0E-06 AGGGACATAAAAATTCA 17 V_FOXP1_01_M00987 TRANSFAC - 183819777 183819796 6.0E-06 TTTGTTTTGTTTTGTTTTTG 20 V_FOXP1_01_M00987 TRANSFAC - 183819780 183819799 0.0E+00 TGTTTTGTTTTGTTTTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 183819781 183819800 7.0E-06 TTGTTTTGTTTTGTTTTGTT 20 V_FOXP1_01_M00987 TRANSFAC - 183819782 183819801 1.0E-06 TTTGTTTTGTTTTGTTTTGT 20 V_DBX1_01_M01483 TRANSFAC + 183819379 183819395 2.0E-06 ATAATAATTATGAATTT 17 V_DBX1_01_M01483 TRANSFAC - 183819383 183819399 6.0E-06 ATAAAAATTCATAATTA 17 V_FREAC7_01_M00293 TRANSFAC - 183814864 183814879 4.0E-06 CTTAAATAAACACAAT 16 V_TCF3_01_M01594 TRANSFAC - 183819781 183819793 1.0E-06 GTTTTGTTTTGTT 13 V_APOLYA_B_M00310 TRANSFAC - 183814861 183814875 1.0E-06 AATAAACACAATTTG 15 V_POU3F3_01_M03090 TRANSFAC - 183819382 183819398 3.0E-06 TAAAAATTCATAATTAT 17 V_POU3F3_01_M03090 TRANSFAC + 183819383 183819399 3.0E-06 TAATTATGAATTTTTAT 17 V_EVI1_05_M00082 TRANSFAC + 183819375 183819385 5.0E-06 AGATATAATAA 11 V_XFD1_01_M00267 TRANSFAC - 183814864 183814877 3.0E-06 TAAATAAACACAAT 14 V_SRY_07_M02813 TRANSFAC + 183819375 183819390 9.0E-06 AGATATAATAATTATG 16 V_SRY_07_M02813 TRANSFAC - 183819375 183819390 3.0E-06 CATAATTATTATATCT 16 V_SRY_07_M02813 TRANSFAC + 183819378 183819393 9.0E-06 TATAATAATTATGAAT 16 V_FOXA2_04_M02749 TRANSFAC - 183814863 183814879 9.0E-06 CTTAAATAAACACAATT 17 V_FOXA2_04_M02749 TRANSFAC + 183819188 183819204 7.0E-06 AGTTGGTAAACAAGCAT 17 V_HMGIY_Q3_M01010 TRANSFAC + 183819253 183819267 6.0E-06 ATAGGAAATTCTTTT 15 V_FOXD3_01_M00130 TRANSFAC - 183814854 183814865 6.0E-06 ATTTGTTATTTT 12 V_BCL6_01_M01183 TRANSFAC - 183819779 183819794 6.0E-06 TGTTTTGTTTTGTTTT 16 V_BCL6_01_M01183 TRANSFAC - 183819784 183819799 6.0E-06 TGTTTTGTTTTGTTTT 16 V_FOXO4_02_M00476 TRANSFAC - 183819190 183819203 9.0E-06 TGCTTGTTTACCAA 14 V_SPDEF_04_M02915 TRANSFAC - 183819356 183819371 8.0E-06 TTTAAAATCCTTTTTG 16 V_OCTAMER_01_M01324 TRANSFAC - 183819382 183819398 3.0E-06 TAAAAATTCATAATTAT 17 V_OCTAMER_01_M01324 TRANSFAC + 183819383 183819399 3.0E-06 TAATTATGAATTTTTAT 17 V_SRY_02_M00160 TRANSFAC + 183819778 183819789 5.0E-06 AAAAACAAAACA 12 V_SRY_02_M00160 TRANSFAC + 183819783 183819794 8.0E-06 CAAAACAAAACA 12 V_HOXA4_01_M01370 TRANSFAC - 183819378 183819394 7.0E-06 AATTCATAATTATTATA 17 V_SOX11_04_M02899 TRANSFAC - 183819376 183819389 6.0E-06 ATAATTATTATATC 14 V_HNF3_Q6_01_M01012 TRANSFAC + 183814863 183814880 4.0E-06 AATTGTGTTTATTTAAGC 18 V_FOXJ1_03_M02750 TRANSFAC - 183814862 183814877 0.0E+00 TAAATAAACACAATTT 16 V_STAT6_01_M00494 TRANSFAC - 183819248 183819255 7.0E-06 TATTTCCA 8 V_HFH4_01_M00742 TRANSFAC + 183814865 183814877 0.0E+00 TTGTGTTTATTTA 13 V_HOXC6_01_M01406 TRANSFAC + 183819378 183819394 3.0E-06 TATAATAATTATGAATT 17 V_AIRE_02_M01000 TRANSFAC - 183819781 183819805 9.0E-06 GATTTTTGTTTTGTTTTGTTTTGTT 25 V_AP4_Q6_01_M00927 TRANSFAC + 183819277 183819285 1.0E-05 AACAGCTGC 9 V_SOX21_03_M02803 TRANSFAC + 183819375 183819390 2.0E-06 AGATATAATAATTATG 16 V_SOX21_03_M02803 TRANSFAC - 183819375 183819390 1.0E-06 CATAATTATTATATCT 16 V_SOX21_03_M02803 TRANSFAC + 183819378 183819393 1.0E-06 TATAATAATTATGAAT 16 V_SOX21_03_M02803 TRANSFAC - 183819378 183819393 1.0E-06 ATTCATAATTATTATA 16 V_NFAT2_01_M01748 TRANSFAC + 183819247 183819255 6.0E-06 ATGGAAATA 9 V_NKX62_Q2_M00489 TRANSFAC + 183819379 183819390 0.0E+00 ATAATAATTATG 12 V_MEF2A_Q6_M02024 TRANSFAC + 183819032 183819041 9.0E-06 TATTTTTAAG 10 V_ELF4_04_M02850 TRANSFAC + 183819774 183819790 5.0E-06 TCTCAAAAACAAAACAA 17 V_FOXA2_02_M02853 TRANSFAC + 183814853 183814867 0.0E+00 TAAAATAACAAATTG 15 V_FREAC3_01_M00291 TRANSFAC + 183819188 183819203 3.0E-06 AGTTGGTAAACAAGCA 16 V_DBX2_01_M01360 TRANSFAC + 183819377 183819392 4.0E-06 ATATAATAATTATGAA 16 V_PR_01_M00954 TRANSFAC + 183819137 183819163 9.0E-06 TTTGGATAGAGCTTTTGTTCTGGATCA 27 V_ZFP105_03_M02827 TRANSFAC + 183814852 183814866 9.0E-06 GTAAAATAACAAATT 15 V_OCT1_03_M00137 TRANSFAC + 183819379 183819391 1.0E-05 ATAATAATTATGA 13 V_OCT1_03_M00137 TRANSFAC - 183819380 183819392 2.0E-06 TTCATAATTATTA 13 V_HNF1_Q6_M00790 TRANSFAC - 183819378 183819395 8.0E-06 AAATTCATAATTATTATA 18 V_TATA_01_M00252 TRANSFAC - 183819167 183819181 7.0E-06 GTATATAAAGGGGAT 15 V_CEBPB_02_M00117 TRANSFAC + 183819728 183819741 9.0E-06 AGATTGCGCCACTG 14 V_PXRRXR_02_M01153 TRANSFAC - 183819105 183819112 1.0E-05 AGAGTTCA 8 V_HOXB6_01_M01460 TRANSFAC - 183819379 183819394 7.0E-06 AATTCATAATTATTAT 16 V_HNF3_Q6_M00791 TRANSFAC - 183814866 183814878 2.0E-06 TTAAATAAACACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 183814868 183814878 2.0E-06 TGTTTATTTAA 11 V_HNF1_Q6_01_M01011 TRANSFAC + 183819377 183819397 5.0E-06 ATATAATAATTATGAATTTTT 21 V_TTF1_Q6_M00794 TRANSFAC + 183818961 183818972 7.0E-06 ACCTCAAGTGAT 12 V_SOX18_03_M02801 TRANSFAC - 183819375 183819390 6.0E-06 CATAATTATTATATCT 16 V_CDX1_01_M01373 TRANSFAC - 183819391 183819406 8.0E-06 TAGGGACATAAAAATT 16 V_OCT1_04_M00138 TRANSFAC - 183819379 183819401 0.0E+00 ACATAAAAATTCATAATTATTAT 23 V_OCT1_08_M01354 TRANSFAC + 183819377 183819392 0.0E+00 ATATAATAATTATGAA 16 V_OCT1_08_M01354 TRANSFAC - 183819379 183819394 1.0E-05 AATTCATAATTATTAT 16 V_GR_01_M00955 TRANSFAC + 183819137 183819163 7.0E-06 TTTGGATAGAGCTTTTGTTCTGGATCA 27 V_NCX_02_M01420 TRANSFAC + 183819379 183819395 5.0E-06 ATAATAATTATGAATTT 17 V_NCX_02_M01420 TRANSFAC - 183819383 183819399 8.0E-06 ATAAAAATTCATAATTA 17 V_ISGF3G_03_M02771 TRANSFAC + 183819777 183819791 8.0E-06 CAAAAACAAAACAAA 15 V_SOX11_03_M02795 TRANSFAC + 183819776 183819792 5.0E-06 TCAAAAACAAAACAAAA 17 V_FOXO1_Q5_M01216 TRANSFAC + 183819778 183819786 1.0E-06 AAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC + 183819783 183819791 8.0E-06 CAAAACAAA 9 V_GATA4_Q3_M00632 TRANSFAC - 183819168 183819179 5.0E-06 ATATAAAGGGGA 12 V_ELF1_Q6_M00746 TRANSFAC + 183819250 183819261 2.0E-06 GAAATAGGAAAT 12 V_HFH8_01_M00294 TRANSFAC + 183814865 183814877 2.0E-06 TTGTGTTTATTTA 13 V_FAC1_01_M00456 TRANSFAC + 183819778 183819791 1.0E-06 AAAAACAAAACAAA 14 V_FAC1_01_M00456 TRANSFAC + 183819780 183819793 9.0E-06 AAACAAAACAAAAC 14 V_FOXL1_02_M02857 TRANSFAC + 183819779 183819794 0.0E+00 AAAACAAAACAAAACA 16 V_FOXL1_02_M02857 TRANSFAC + 183819784 183819799 0.0E+00 AAAACAAAACAAAACA 16 V_FOXL1_04_M02753 TRANSFAC - 183814863 183814879 7.0E-06 CTTAAATAAACACAATT 17 V_LUN1_01_M00480 TRANSFAC + 183814604 183814620 3.0E-06 TCCCAGCTACTTGGGAG 17 V_FOXJ3_06_M02855 TRANSFAC + 183819778 183819794 0.0E+00 AAAAACAAAACAAAACA 17 V_FOXJ3_06_M02855 TRANSFAC + 183819783 183819799 0.0E+00 CAAAACAAAACAAAACA 17 V_MSX1_02_M01412 TRANSFAC + 183819377 183819392 8.0E-06 ATATAATAATTATGAA 16 V_FOXO3_01_M00477 TRANSFAC - 183819190 183819203 1.0E-06 TGCTTGTTTACCAA 14 V_FOXA2_03_M02260 TRANSFAC + 183814868 183814879 8.0E-06 TGTTTATTTAAG 12 V_FOX_Q2_M00809 TRANSFAC + 183814865 183814877 1.0E-06 TTGTGTTTATTTA 13 V_T3RBETA_Q6_01_M02119 TRANSFAC - 183818958 183818974 1.0E-06 AGATCACTTGAGGTCAG 17 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 183818954 183818968 1.0E-06 CTTGAGGTCAGGAGT 15 V_HFH3_01_M00289 TRANSFAC + 183814865 183814877 0.0E+00 TTGTGTTTATTTA 13 V_FOXJ2_01_M00422 TRANSFAC - 183814863 183814880 4.0E-06 GCTTAAATAAACACAATT 18 V_HOXD8_01_M01432 TRANSFAC - 183819376 183819392 7.0E-06 TTCATAATTATTATATC 17 V_HOMEZ_01_M01429 TRANSFAC - 183819364 183819380 2.0E-06 ATATCTTCGTTTAAAAT 17 V_FOXO1_01_M00473 TRANSFAC - 183814866 183814875 7.0E-06 AATAAACACA 10 V_FOXO1_01_M00473 TRANSFAC + 183819777 183819786 4.0E-06 CAAAAACAAA 10 V_IRF1_01_M00062 TRANSFAC + 183819777 183819789 5.0E-06 CAAAAACAAAACA 13 V_PIT1_Q6_M00802 TRANSFAC - 183819377 183819394 0.0E+00 AATTCATAATTATTATAT 18 V_FREAC4_01_M00292 TRANSFAC - 183814864 183814879 1.0E-06 CTTAAATAAACACAAT 16 V_MEF2A_05_M01301 TRANSFAC - 183819172 183819183 8.0E-06 AGGTATATAAAG 12 V_FOXO4_01_M00472 TRANSFAC + 183819193 183819203 6.0E-06 GTAAACAAGCA 11 V_FOXO4_01_M00472 TRANSFAC + 183819778 183819788 1.0E-05 AAAAACAAAAC 11 V_ATATA_B_M00311 TRANSFAC + 183814871 183814880 3.0E-06 TTATTTAAGC 10 V_FOXK1_03_M02752 TRANSFAC + 183819188 183819204 3.0E-06 AGTTGGTAAACAAGCAT 17 V_SMAD1_01_M01590 TRANSFAC - 183819147 183819158 2.0E-06 CAGAACAAAAGC 12 V_SMAD1_01_M01590 TRANSFAC + 183819778 183819789 3.0E-06 AAAAACAAAACA 12 V_SMAD1_01_M01590 TRANSFAC + 183819783 183819794 6.0E-06 CAAAACAAAACA 12 V_SOX14_03_M02798 TRANSFAC + 183819375 183819390 4.0E-06 AGATATAATAATTATG 16 V_SOX14_03_M02798 TRANSFAC - 183819375 183819390 4.0E-06 CATAATTATTATATCT 16 V_SOX14_03_M02798 TRANSFAC + 183819378 183819393 3.0E-06 TATAATAATTATGAAT 16 V_SOX14_03_M02798 TRANSFAC - 183819378 183819393 5.0E-06 ATTCATAATTATTATA 16 V_NANOG_02_M01247 TRANSFAC + 183819774 183819793 1.0E-06 TCTCAAAAACAAAACAAAAC 20 V_NANOG_02_M01247 TRANSFAC + 183819779 183819798 0.0E+00 AAAACAAAACAAAACAAAAC 20 V_NANOG_02_M01247 TRANSFAC + 183819784 183819803 0.0E+00 AAAACAAAACAAAACAAAAA 20 V_T3RALPHA_Q6_M01724 TRANSFAC - 183818958 183818968 1.0E-06 CTTGAGGTCAG 11 V_HOXC8_01_M01321 TRANSFAC - 183819379 183819394 7.0E-06 AATTCATAATTATTAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.