Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

EPHA6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 285220 EPH receptor A6 chr3 + 96528424 - 96533924 96533424 Transcription Factor Binding Sites   Download all TFBS in the EPHA6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX - 96532301 96532319 0.0E+00 GAGGACCCTCGGCGTCCGC 19 NF-kappaB_MA0061.1 JASPAR - 96532007 96532016 4.0E-06 GGGGATTTCC 10 HINFP1_C2H2_full_monomeric_12_1 SELEX - 96532299 96532310 1.0E-05 CGGCGTCCGCGG 12 EWSR1-FLI1_MA0149.1 JASPAR - 96532077 96532094 4.0E-06 GAAAGGAGGGAGGGATGC 18 Pax4_MA0068.1 JASPAR + 96531980 96532009 9.0E-06 AAATACTAGTAACAAATAAAGTATCACGGA 30 REL_MA0101.1 JASPAR - 96532007 96532016 1.0E-06 GGGGATTTCC 10 RELA_MA0107.1 JASPAR - 96532007 96532016 2.0E-06 GGGGATTTCC 10 V_NFKAPPAB65_01_M00052 TRANSFAC - 96532007 96532016 3.0E-06 GGGGATTTCC 10 V_HMGIY_Q3_M01010 TRANSFAC - 96531962 96531976 5.0E-06 ACATCATTTTTCTTT 15 V_RELBP52_01_M01239 TRANSFAC - 96532007 96532016 1.0E-06 GGGGATTTCC 10 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 96532013 96532028 2.0E-06 TATCGCTTGGGTGGGG 16 V_TCFAP2E_04_M02926 TRANSFAC + 96531956 96531969 8.0E-06 TTCAAGAAAGAAAA 14 V_SOX1_04_M02906 TRANSFAC - 96531986 96532000 1.0E-05 CTTTATTTGTTACTA 15 V_CREL_01_M00053 TRANSFAC - 96532007 96532016 1.0E-06 GGGGATTTCC 10 V_KROX_Q6_M00982 TRANSFAC + 96532267 96532280 1.0E-05 CCCGCCTCCGCCGC 14 V_HNF1_Q6_01_M01011 TRANSFAC + 96531984 96532004 1.0E-05 ACTAGTAACAAATAAAGTATC 21 V_NFKAPPAB50_01_M00051 TRANSFAC - 96532007 96532016 6.0E-06 GGGGATTTCC 10 V_ZFP691_04_M02937 TRANSFAC + 96532927 96532943 1.0E-06 GAACTGACTCCTCTTAA 17 V_TITF1_Q3_M00432 TRANSFAC - 96533267 96533276 4.0E-06 ACTCAAGTGG 10 V_NFKAPPAB_01_M00054 TRANSFAC - 96532007 96532016 4.0E-06 GGGGATTTCC 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 96532077 96532094 4.0E-06 GAAAGGAGGGAGGGATGC 18 V_LTF_Q6_M01692 TRANSFAC - 96533259 96533267 6.0E-06 GGCACTTGC 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.