Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GPR27 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2850 G protein-coupled receptor 27 chr3 + 71798200 - 71803700 71803200 Transcription Factor Binding Sites   Download all TFBS in the GPR27 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Tp53_p53l_DBD_dimeric_18_1 SELEX - 71803364 71803381 2.0E-06 ACAGGTCGAGCAGCAGGT 18 POU3F3_POU_DBD_monomeric_12_1 SELEX - 71799149 71799160 4.0E-06 ATACATAAATCA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 71799149 71799161 6.0E-06 AATACATAAATCA 13 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 71802287 71802303 1.0E-06 GAGGTCAAGGGAGTTGA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 71802287 71802304 1.0E-06 GGAGGTCAAGGGAGTTGA 18 IRF7_IRF_DBD_trimeric_17_1 SELEX + 71802247 71802263 3.0E-06 CAAGCGAAATTTGAATC 17 POU4F3_POU_DBD_monomeric_16_1 SELEX - 71799145 71799160 6.0E-06 ATACATAAATCATGGT 16 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 71802287 71802303 2.0E-06 GAGGTCAAGGGAGTTGA 17 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 71802287 71802303 3.0E-06 GAGGTCAAGGGAGTTGA 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 71799147 71799163 9.0E-06 AAAATACATAAATCATG 17 POU3F1_POU_DBD_monomeric_12_2 SELEX - 71799149 71799160 2.0E-06 ATACATAAATCA 12 Myf_MA0055.1 JASPAR - 71803759 71803770 4.0E-06 CAGCAGCAGCAG 12 IRF3_IRF_full_trimeric_21_1 SELEX + 71799233 71799253 6.0E-06 CGTAGATAGAAACAGAAAACA 21 POU4F1_POU_DBD_monomeric_14_1 SELEX - 71799147 71799160 2.0E-06 ATACATAAATCATG 14 V_NRSF_Q4_M01028 TRANSFAC + 71803309 71803327 0.0E+00 GTGCTGTTCGCGCTGCTGA 19 V_AR_Q6_01_M01996 TRANSFAC + 71804046 71804060 2.0E-06 GTGCAAGATGTTCTA 15 V_WT1_Q6_01_M02036 TRANSFAC - 71803455 71803464 4.0E-06 CGCCCCCGCC 10 V_MYF_01_M01302 TRANSFAC - 71803759 71803770 4.0E-06 CAGCAGCAGCAG 12 V_PR_01_M00954 TRANSFAC + 71804039 71804065 9.0E-06 AGAGGCTGTGCAAGATGTTCTACGCCG 27 V_GFI1_01_M00250 TRANSFAC - 71799138 71799161 5.0E-06 AATACATAAATCATGGTTCTCTCA 24 V_REST_01_M01256 TRANSFAC + 71803760 71803781 3.0E-06 TGCTGCTGCTGGCCGTGGTGGT 22 V_REX1_03_M01744 TRANSFAC + 71803012 71803023 9.0E-06 GAGATGGCGGCG 12 V_SP1SP3_Q4_M01219 TRANSFAC + 71802985 71802995 5.0E-06 CCGCCTCCTCC 11 V_NEUROD_02_M01288 TRANSFAC + 71803279 71803290 1.0E-06 CTGCTGCTGTGC 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.