Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SEC14L4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 284904 SEC14-like 4 (S. cerevisiae) chr22 - 30901198 - 30906698 30901698 Transcription Factor Binding Sites   Download all TFBS in the SEC14L4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYF6_bHLH_full_dimeric_10_1 SELEX + 30901189 30901198 9.0E-06 AACAAATGTT 10 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 30901309 30901325 3.0E-06 GAGAGCACGCAAGGTCA 17 Esrrb_MA0141.1 JASPAR - 30902511 30902522 0.0E+00 TGTTCAAGGTCA 12 NR2F1_MA0017.1 JASPAR - 30900649 30900662 8.0E-06 TGACCTCTGCCTCT 14 FOXI1_MA0042.1 JASPAR - 30901184 30901195 2.0E-06 ATTTGTTTGTTT 12 NRL_bZIP_DBD_monomeric_11_1 SELEX - 30902625 30902635 4.0E-06 ATTCTGCTGAC 11 Foxd3_MA0041.1 JASPAR - 30901184 30901195 0.0E+00 ATTTGTTTGTTT 12 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX - 30902510 30902520 3.0E-06 TTCAAGGTCAG 11 REST_MA0138.2 JASPAR - 30901362 30901382 3.0E-06 TGCAGCACGCGGGACAGGGGC 21 RORA_1_MA0071.1 JASPAR - 30902511 30902520 3.0E-06 TTCAAGGTCA 10 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 30901184 30901196 8.0E-06 AAACAAACAAATG 13 V_PREP1_01_M01459 TRANSFAC + 30902528 30902543 5.0E-06 TGGGACCTGTCAGTGC 16 V_EBF_Q6_M00977 TRANSFAC - 30900740 30900750 8.0E-06 GTCCCCAGGGA 11 V_FOXD3_01_M00130 TRANSFAC - 30901184 30901195 0.0E+00 ATTTGTTTGTTT 12 V_ERR3_Q2_01_M02094 TRANSFAC - 30902509 30902521 2.0E-06 GTTCAAGGTCAGG 13 V_LRH1_Q5_01_M02098 TRANSFAC - 30902511 30902521 0.0E+00 GTTCAAGGTCA 11 V_LMAF_Q2_M01139 TRANSFAC + 30902624 30902632 6.0E-06 GGTCAGCAG 9 V_EAR2_Q2_M01728 TRANSFAC - 30900649 30900662 7.0E-06 TGACCTCTGCCTCT 14 V_FOXJ1_03_M02750 TRANSFAC + 30901183 30901198 9.0E-06 CAAACAAACAAATGTT 16 V_GATA_C_M00203 TRANSFAC - 30900692 30900702 8.0E-06 TGATAAGGCAT 11 V_HFH4_01_M00742 TRANSFAC - 30901183 30901195 0.0E+00 ATTTGTTTGTTTG 13 V_OCT_C_M00210 TRANSFAC - 30901208 30901220 7.0E-06 CTGCTTTTCATGT 13 V_ZFP691_03_M02833 TRANSFAC + 30902534 30902550 0.0E+00 CTGTCAGTGCTCACTGA 17 V_TCFAP2E_04_M02926 TRANSFAC + 30900634 30900647 1.0E-06 TTGTGGAAAAAAAA 14 V_PPARGRXRA_01_M02262 TRANSFAC + 30900648 30900662 6.0E-06 CAGAGGCAGAGGTCA 15 V_PPARGRXRA_01_M02262 TRANSFAC + 30901407 30901421 7.0E-06 CTGGACCAGAGGGCA 15 V_HNF3G_Q4_M02015 TRANSFAC - 30901185 30901192 7.0E-06 TGTTTGTT 8 V_COUP_01_M00158 TRANSFAC - 30900649 30900662 8.0E-06 TGACCTCTGCCTCT 14 V_ZBP89_Q4_M01816 TRANSFAC + 30901266 30901275 4.0E-06 CCCTCCCCCA 10 V_HNF3_Q6_M00791 TRANSFAC + 30901182 30901194 2.0E-06 CCAAACAAACAAA 13 V_OCT1_05_M00161 TRANSFAC - 30901207 30901220 6.0E-06 CTGCTTTTCATGTC 14 V_REST_01_M01256 TRANSFAC + 30901358 30901379 5.0E-06 ATGGGCCCCTGTCCCGCGTGCT 22 V_PAX6_Q2_M00979 TRANSFAC + 30902510 30902523 1.0E-06 CTGACCTTGAACAC 14 V_ERR1_Q3_M01841 TRANSFAC + 30902508 30902522 4.0E-06 CCCTGACCTTGAACA 15 V_DAX1_01_M01248 TRANSFAC - 30902505 30902524 7.0E-06 TGTGTTCAAGGTCAGGGGAA 20 V_FOXO1_Q5_M01216 TRANSFAC + 30900643 30900651 1.0E-05 AAAAACAGA 9 V_HFH8_01_M00294 TRANSFAC - 30901183 30901195 2.0E-06 ATTTGTTTGTTTG 13 V_LRH1_Q5_M01142 TRANSFAC + 30902510 30902521 0.0E+00 CTGACCTTGAAC 12 V_ERR1_Q2_M00511 TRANSFAC - 30902509 30902522 6.0E-06 TGTTCAAGGTCAGG 14 V_MEIS1_01_M00419 TRANSFAC - 30902531 30902542 3.0E-06 CACTGACAGGTC 12 V_SRF_01_M00152 TRANSFAC - 30900691 30900708 1.0E-06 ATGCCCTGATAAGGCATT 18 V_REST_02_M02256 TRANSFAC - 30901362 30901382 3.0E-06 TGCAGCACGCGGGACAGGGGC 21 V_ESRRA_03_M02748 TRANSFAC - 30902506 30902522 9.0E-06 TGTTCAAGGTCAGGGGA 17 V_ZFP281_01_M01597 TRANSFAC - 30901265 30901275 9.0E-06 TGGGGGAGGGA 11 V_SRF_06_M02916 TRANSFAC + 30900636 30900652 2.0E-06 GTGGAAAAAAAACAGAG 17 V_HFH3_01_M00289 TRANSFAC - 30901183 30901195 4.0E-06 ATTTGTTTGTTTG 13 V_FOXJ2_01_M00422 TRANSFAC + 30901180 30901197 1.0E-05 AGCCAAACAAACAAATGT 18 V_HNF3B_Q6_M02014 TRANSFAC - 30901185 30901193 1.0E-05 TTGTTTGTT 9 V_COUP_DR1_Q6_M00765 TRANSFAC - 30900650 30900662 4.0E-06 TGACCTCTGCCTC 13 PPARG_RXRA_MA0065.2 JASPAR + 30900648 30900662 6.0E-06 CAGAGGCAGAGGTCA 15 PPARG_RXRA_MA0065.2 JASPAR + 30901407 30901421 7.0E-06 CTGGACCAGAGGGCA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.