Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

BOD1L2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 284257 biorientation of chromosomes in cell division 1-like 2 chr18 + 54809292 - 54814792 54814292 Transcription Factor Binding Sites   Download all TFBS in the BOD1L2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 54810008 54810023 0.0E+00 AAGCATAAGTAATTAG 16 SOX21_HMG_DBD_dimeric_15_1 SELEX - 54809956 54809970 5.0E-06 AACAATGATGGTGAT 15 EVX2_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 2.0E-06 AGTAATTAGC 10 SRY_HMG_DBD_dimeric_15_1 SELEX + 54809956 54809970 5.0E-06 ATCACCATCATTGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX + 54809955 54809971 7.0E-06 CATCACCATCATTGTTG 17 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 2.0E-06 AGTAATTAGC 10 SOX8_HMG_full_dimeric_15_1 SELEX - 54809956 54809970 8.0E-06 AACAATGATGGTGAT 15 SOX8_HMG_full_dimeric_17_1 SELEX - 54809955 54809971 3.0E-06 CAACAATGATGGTGATG 17 HOXA1_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 6.0E-06 AGTAATTAGC 10 TCF7L1_HMG_full_monomeric_12_1 SELEX + 54817053 54817064 6.0E-06 TAACATAAAAGG 12 POU4F3_POU_DBD_monomeric_16_1 SELEX - 54810008 54810023 3.0E-06 AAGCATAAGTAATTAG 16 LEF1_HMG_DBD_monomeric_15_1 SELEX + 54817053 54817067 9.0E-06 TAACATAAAAGGAAC 15 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 5.0E-06 AGTAATTAGC 10 HOXB2_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 7.0E-06 AGTAATTAGC 10 EMX1_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 3.0E-06 AGTAATTAGC 10 SOX15_HMG_full_dimeric_15_1 SELEX + 54809956 54809970 8.0E-06 ATCACCATCATTGTT 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 54817053 54817064 7.0E-06 TAACATAAAAGG 12 SOX7_HMG_full_dimeric_17_1 SELEX - 54809955 54809971 9.0E-06 CAACAATGATGGTGATG 17 GBX1_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 6.0E-06 AGTAATTAGC 10 TBX15_TBX_DBD_dimeric_19_1 SELEX + 54815662 54815680 8.0E-06 GAGTGAGAAGTTCAGACAT 19 Hoxd3_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 6.0E-06 AGTAATTAGC 10 HOXB3_homeodomain_DBD_monomeric_10_1 SELEX - 54810007 54810016 6.0E-06 AGTAATTAGC 10 NFIB_NFI_full_dimeric_15_1 SELEX + 54818388 54818402 1.0E-05 TGGGCCATGTGCCAG 15 POU6F2_POU_full_monomeric_10_1 SELEX + 54810007 54810016 3.0E-06 GCTAATTACT 10 Sox3_HMG_DBD_dimeric_17_1 SELEX - 54809955 54809971 7.0E-06 CAACAATGATGGTGATG 17 SOX9_HMG_full_dimeric_17_1 SELEX - 54809955 54809971 5.0E-06 CAACAATGATGGTGATG 17 V_STAT5A_Q6_M01890 TRANSFAC - 54817079 54817091 7.0E-06 ACATTTCTTAAAA 13 V_MSX3_01_M01341 TRANSFAC - 54810005 54810020 4.0E-06 CATAAGTAATTAGCAC 16 V_GCM_Q2_M00634 TRANSFAC - 54818358 54818369 4.0E-06 CAGGCCCGCATG 12 V_GBX2_01_M01382 TRANSFAC + 54810004 54810020 9.0E-06 GGTGCTAATTACTTATG 17 V_GATA1_03_M00127 TRANSFAC - 54809926 54809939 5.0E-06 GTGATGATTACAGG 14 V_HOXD1_01_M01448 TRANSFAC + 54810004 54810020 9.0E-06 GGTGCTAATTACTTATG 17 V_PITX3_Q2_M01735 TRANSFAC - 54818337 54818345 2.0E-06 TGGATTAGA 9 V_VAX2_01_M01327 TRANSFAC - 54810005 54810020 9.0E-06 CATAAGTAATTAGCAC 16 V_LHX3A_01_M00510 TRANSFAC - 54810008 54810017 1.0E-05 AAGTAATTAG 10 V_EVX1_01_M01475 TRANSFAC - 54810003 54810019 8.0E-06 ATAAGTAATTAGCACCT 17 V_K2B_01_M01348 TRANSFAC - 54810003 54810019 3.0E-06 ATAAGTAATTAGCACCT 17 V_DLX5_01_M01388 TRANSFAC + 54810005 54810020 6.0E-06 GTGCTAATTACTTATG 16 V_EN1_02_M01365 TRANSFAC - 54810005 54810020 6.0E-06 CATAAGTAATTAGCAC 16 V_GFI1_01_M00250 TRANSFAC + 54817002 54817025 5.0E-06 AGATTTAAAATCACTCCATCTGAG 24 V_TCF7_03_M02817 TRANSFAC + 54817052 54817068 3.0E-06 CTAACATAAAAGGAACC 17 V_CDC5_01_M00478 TRANSFAC + 54817003 54817014 3.0E-06 GATTTAAAATCA 12 V_LHX3b_01_M01971 TRANSFAC - 54810008 54810017 1.0E-05 AAGTAATTAG 10 V_BCL6B_04_M02844 TRANSFAC - 54809991 54810006 8.0E-06 ACCTCCACCCCTTCTA 16 V_HOXB7_01_M01396 TRANSFAC + 54810005 54810020 5.0E-06 GTGCTAATTACTTATG 16 V_CEBPA_01_M00116 TRANSFAC + 54816973 54816986 5.0E-06 TTTTTACAAAAACA 14 V_OSR2_04_M02889 TRANSFAC + 54810003 54810018 8.0E-06 AGGTGCTAATTACTTA 16 V_BARHL1_01_M01332 TRANSFAC - 54810005 54810020 4.0E-06 CATAAGTAATTAGCAC 16 V_HDX_01_M01333 TRANSFAC + 54817003 54817019 4.0E-06 GATTTAAAATCACTCCA 17 V_IPF1_01_M01233 TRANSFAC - 54810008 54810017 7.0E-06 AAGTAATTAG 10 V_TFIIA_Q6_M00707 TRANSFAC + 54817056 54817067 9.0E-06 CATAAAAGGAAC 12 V_TCF7_04_M02921 TRANSFAC + 54816971 54816985 3.0E-06 CCTTTTTACAAAAAC 15 V_BARX2_01_M01431 TRANSFAC + 54810005 54810020 5.0E-06 GTGCTAATTACTTATG 16 V_HOXC5_01_M01454 TRANSFAC + 54810004 54810020 7.0E-06 GGTGCTAATTACTTATG 17 V_CHX10_01_M00437 TRANSFAC - 54810004 54810017 8.0E-06 AAGTAATTAGCACC 14 V_TBX22_01_M01195 TRANSFAC - 54815662 54815680 3.0E-06 ATGTCTGAACTTCTCACTC 19 V_HB9_01_M01349 TRANSFAC + 54810005 54810020 6.0E-06 GTGCTAATTACTTATG 16 V_SATB1_01_M01232 TRANSFAC - 54816973 54816984 9.0E-06 TTTTTGTAAAAA 12 V_PIT1_Q6_M00802 TRANSFAC + 54809945 54809962 8.0E-06 CCTTCATCATCATCACCA 18 V_LHX4_01_M01421 TRANSFAC + 54810004 54810020 6.0E-06 GGTGCTAATTACTTATG 17 V_BARX1_01_M01340 TRANSFAC - 54810003 54810018 9.0E-06 TAAGTAATTAGCACCT 16 V_NF1_Q6_M00193 TRANSFAC - 54810031 54810048 5.0E-06 AATTGGCTAAAACCAAGA 18 V_IPF1_06_M01438 TRANSFAC - 54810003 54810018 4.0E-06 TAAGTAATTAGCACCT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.