Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

EXOC3L1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 283849 exocyst complex component 3-like 1 chr16 - 67223607 - 67229107 67224107 Transcription Factor Binding Sites   Download all TFBS in the EXOC3L1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR + 67226068 67226078 7.0E-06 GCGGAAGTGGC 11 SOX10_HMG_full_dimeric_14_1 SELEX + 67224704 67224717 1.0E-06 TGGATGTTCAGTCC 14 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 67224691 67224700 6.0E-06 AATAATTACC 10 IRF7_IRF_DBD_dimeric_14_1 SELEX - 67219637 67219650 3.0E-06 CAGAAACCGAAAGA 14 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 67224691 67224700 7.0E-06 AATAATTACC 10 FOXF2_MA0030.1 JASPAR - 67224643 67224656 3.0E-06 TCAAGATAAACACA 14 NHLH1_MA0048.1 JASPAR + 67221649 67221660 3.0E-06 TCGCAGCTGCTC 12 NHLH1_MA0048.1 JASPAR - 67221649 67221660 1.0E-05 GAGCAGCTGCGA 12 Zfp423_MA0116.1 JASPAR + 67221622 67221636 1.0E-06 GCCCCCCAGGGGTGC 15 Zfp423_MA0116.1 JASPAR - 67221622 67221636 3.0E-06 GCACCCCTGGGGGGC 15 IRF8_IRF_full_dimeric_14_1 SELEX - 67219637 67219650 1.0E-06 CAGAAACCGAAAGA 14 EWSR1-FLI1_MA0149.1 JASPAR - 67220592 67220609 5.0E-06 GAGAGGAAGGAGGGAGGC 18 EWSR1-FLI1_MA0149.1 JASPAR - 67220596 67220613 0.0E+00 GGAGGAGAGGAAGGAGGG 18 SOX8_HMG_DBD_dimeric_14_1 SELEX + 67224704 67224717 7.0E-06 TGGATGTTCAGTCC 14 Pax4_MA0068.1 JASPAR - 67224673 67224702 1.0E-06 TAAATAATTACCACCTTATAGTCCCTTCCC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 67226063 67226076 9.0E-06 CGGAAGCGGAAGTG 14 TEAD1_TEA_full_monomeric_10_1 SELEX - 67220810 67220819 3.0E-06 TACATTCCTT 10 POU6F2_POU_DBD_dimeric_16_1 SELEX + 67224684 67224699 1.0E-06 ATAAGGTGGTAATTAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 67224684 67224699 2.0E-06 ATAATTACCACCTTAT 16 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 67224690 67224704 9.0E-06 ACTAAATAATTACCA 15 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 67219474 67219485 5.0E-06 TTGCCCCACAAG 12 SP1_MA0079.2 JASPAR - 67220791 67220800 3.0E-06 CCCCTCCCCC 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 67224691 67224700 9.0E-06 GGTAATTATT 10 NFATC1_NFAT_full_dimeric_20_1 SELEX - 67219627 67219646 5.0E-06 AACCGAAAGAATGTTTTCCT 20 CTCF_C2H2_full_monomeric_17_1 SELEX + 67219466 67219482 5.0E-06 GGCGCCACCTTGTGGGG 17 PBX1_MA0070.1 JASPAR + 67221701 67221712 2.0E-06 CCATCAATCAGA 12 IRF9_IRF_full_trimeric_15_1 SELEX - 67219637 67219651 1.0E-06 ACAGAAACCGAAAGA 15 IRF9_IRF_full_trimeric_15_1 SELEX - 67219643 67219657 6.0E-06 GAGGAAACAGAAACC 15 Myf_MA0055.1 JASPAR - 67221549 67221560 1.0E-06 AAGCAGCTGCAG 12 GLI2_C2H2_DBD_monomeric_12_1 SELEX - 67225743 67225754 3.0E-06 GAGACCACACTA 12 IRF4_IRF_full_dimeric_15_1 SELEX - 67219636 67219650 2.0E-06 CAGAAACCGAAAGAA 15 ETV6_ETS_full_monomeric_10_1 SELEX + 67226067 67226076 1.0E-06 AGCGGAAGTG 10 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 67220810 67220819 4.0E-06 TACATTCCTT 10 IRF5_IRF_full_dimeric_14_1 SELEX - 67219637 67219650 8.0E-06 CAGAAACCGAAAGA 14 REST_MA0138.2 JASPAR + 67219416 67219436 0.0E+00 TTCAGGACCAAGGCCAAGGCC 21 IRF3_IRF_full_trimeric_21_1 SELEX - 67219636 67219656 0.0E+00 AGGAAACAGAAACCGAAAGAA 21 IRF3_IRF_full_trimeric_21_1 SELEX - 67219642 67219662 0.0E+00 CGAATGAGGAAACAGAAACCG 21 ETV6_ETS_full_dimeric_15_1 SELEX + 67226014 67226028 0.0E+00 ACGGAAGCGGAAGCA 15 ETV6_ETS_full_dimeric_15_1 SELEX + 67226062 67226076 0.0E+00 ACGGAAGCGGAAGTG 15 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 67220785 67220796 3.0E-06 TCCCCCCAGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 67226159 67226170 8.0E-06 CGCCCCCGGGCA 12 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 67224693 67224706 8.0E-06 CCACTAAATAATTA 14 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 67224690 67224704 9.0E-06 ACTAAATAATTACCA 15 Sox2_MA0143.1 JASPAR - 67220661 67220675 1.0E-05 CCATTGTGCTGCAGG 15 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 67226159 67226170 8.0E-06 CGCCCCCGGGCA 12 Zfx_MA0146.1 JASPAR - 67226307 67226320 0.0E+00 CCGGCCCAGGCCTG 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 67224690 67224703 8.0E-06 CTAAATAATTACCA 14 V_FOXP1_01_M00987 TRANSFAC + 67219762 67219781 6.0E-06 GTGTGTGTGTGTGCGTGTAT 20 V_HSF2_01_M00147 TRANSFAC - 67220541 67220550 1.0E-05 AGAACATTCG 10 V_TST1_02_M01316 TRANSFAC - 67224689 67224705 9.0E-06 CACTAAATAATTACCAC 17 V_TST1_02_M01316 TRANSFAC + 67224690 67224706 7.0E-06 TGGTAATTATTTAGTGG 17 V_GCM_Q2_M00634 TRANSFAC + 67219431 67219442 1.0E-05 AAGGCCCGCATG 12 V_BACH2_01_M00490 TRANSFAC + 67224619 67224629 2.0E-06 CGTGAGTCACC 11 V_ZFP410_04_M02936 TRANSFAC + 67225865 67225881 1.0E-06 TCATTCCTCCCCAACTT 17 V_NRSF_Q4_M01028 TRANSFAC + 67226215 67226233 7.0E-06 TTCGTGTCCCTTCTGCAGG 19 V_ZFX_01_M01593 TRANSFAC - 67226263 67226278 5.0E-06 GCCCAGGCCGCACCAG 16 V_ZFX_01_M01593 TRANSFAC + 67226304 67226319 3.0E-06 GACCAGGCCTGGGCCG 16 V_DLX3_01_M01400 TRANSFAC - 67224688 67224704 2.0E-06 ACTAAATAATTACCACC 17 V_STAT_Q6_M00777 TRANSFAC - 67221686 67221698 1.0E-05 AACAGTTCTTGGA 13 V_IK_Q5_M01169 TRANSFAC - 67224591 67224600 3.0E-06 TTTGGGAGGC 10 V_IRF_Q6_01_M00972 TRANSFAC - 67219644 67219654 6.0E-06 GAAACAGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 67219641 67219656 4.0E-06 AGGAAACAGAAACCGA 16 V_MAF_Q6_M00648 TRANSFAC - 67220644 67220659 9.0E-06 AGGTGGGAAGTGGCCA 16 V_MAF_Q6_M00648 TRANSFAC - 67225873 67225888 7.0E-06 TGGGATGAAGTTGGGG 16 V_SP1_03_M02281 TRANSFAC - 67220791 67220800 3.0E-06 CCCCTCCCCC 10 V_NKX61_03_M01489 TRANSFAC - 67224688 67224704 1.0E-06 ACTAAATAATTACCACC 17 V_HOXC6_01_M01406 TRANSFAC - 67224687 67224703 8.0E-06 CTAAATAATTACCACCT 17 V_HOXC6_01_M01406 TRANSFAC + 67224688 67224704 7.0E-06 GGTGGTAATTATTTAGT 17 V_PITX2_Q6_M02114 TRANSFAC + 67221888 67221897 1.0E-06 TGTAATCCCA 10 V_OCTAMER_02_M01477 TRANSFAC + 67224691 67224707 5.0E-06 GGTAATTATTTAGTGGA 17 V_PU1_Q4_M01172 TRANSFAC + 67219643 67219661 2.0E-06 GGTTTCTGTTTCCTCATTC 19 V_LYF1_01_M00141 TRANSFAC - 67224592 67224600 9.0E-06 TTTGGGAGG 9 V_GM497_04_M02864 TRANSFAC - 67219756 67219771 7.0E-06 ACACACACACACTCCC 16 V_GM497_04_M02864 TRANSFAC - 67219764 67219779 5.0E-06 ACACGCACACACACAC 16 V_PAX6_02_M01391 TRANSFAC + 67224693 67224708 7.0E-06 TAATTATTTAGTGGAT 16 V_DLX5_01_M01388 TRANSFAC + 67224689 67224704 4.0E-06 GTGGTAATTATTTAGT 16 V_P53_02_M00272 TRANSFAC + 67220375 67220384 2.0E-06 TGACATGTCT 10 V_NKX62_Q2_M00489 TRANSFAC + 67224689 67224700 8.0E-06 GTGGTAATTATT 12 V_NKX62_Q2_M00489 TRANSFAC - 67224691 67224702 5.0E-06 TAAATAATTACC 12 V_AP1_Q6_M00174 TRANSFAC + 67220514 67220524 7.0E-06 AGTGACTCACT 11 V_SPIC_01_M02042 TRANSFAC + 67226067 67226076 9.0E-06 AGCGGAAGTG 10 V_MYF_01_M01302 TRANSFAC - 67221549 67221560 1.0E-06 AAGCAGCTGCAG 12 V_SOX7_04_M02911 TRANSFAC + 67224689 67224710 4.0E-06 GTGGTAATTATTTAGTGGATGT 22 V_HIC1_03_M01073 TRANSFAC - 67226159 67226176 3.0E-06 TTGGAGTGCCCGGGGGCG 18 V_HSF1_01_M00146 TRANSFAC - 67220541 67220550 4.0E-06 AGAACATTCG 10 V_AP1_Q4_M00188 TRANSFAC + 67220514 67220524 2.0E-06 AGTGACTCACT 11 V_SP1_Q6_M00196 TRANSFAC + 67220790 67220802 4.0E-06 GGGGGGAGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 67220603 67220616 1.0E-06 TGGGGAGGAGAGGA 14 V_IRF_Q6_M00772 TRANSFAC + 67219640 67219654 1.0E-06 TTCGGTTTCTGTTTC 15 V_PAX5_01_M00143 TRANSFAC - 67220600 67220627 2.0E-06 CCATGGGGCAGTGGGGAGGAGAGGAAGG 28 V_ASCL2_03_M02737 TRANSFAC + 67221647 67221663 2.0E-06 TCTCGCAGCTGCTCCAG 17 V_ISRE_01_M00258 TRANSFAC + 67219642 67219656 2.0E-06 CGGTTTCTGTTTCCT 15 V_GADP_01_M01258 TRANSFAC - 67226065 67226076 5.0E-06 CACTTCCGCTTC 12 V_PIT1_01_M01465 TRANSFAC - 67224689 67224705 6.0E-06 CACTAAATAATTACCAC 17 V_PIT1_01_M01465 TRANSFAC + 67224690 67224706 6.0E-06 TGGTAATTATTTAGTGG 17 V_ZBRK1_01_M01105 TRANSFAC - 67221688 67221702 4.0E-06 GGCCAACAGTTCTTG 15 V_HB24_01_M01399 TRANSFAC - 67224691 67224705 3.0E-06 CACTAAATAATTACC 15 V_HIC1_02_M01072 TRANSFAC + 67226040 67226054 8.0E-06 TCCGGCTGCCCGGCG 15 V_CTCF_02_M01259 TRANSFAC - 67219467 67219486 2.0E-06 CTTGCCCCACAAGGTGGCGC 20 V_CTCF_01_M01200 TRANSFAC - 67219465 67219484 7.0E-06 TGCCCCACAAGGTGGCGCCG 20 V_NKX63_01_M01470 TRANSFAC - 67224688 67224704 9.0E-06 ACTAAATAATTACCACC 17 V_ICSBP_Q6_M00699 TRANSFAC - 67219642 67219653 4.0E-06 AAACAGAAACCG 12 V_SP4_Q5_M01273 TRANSFAC - 67220791 67220801 5.0E-06 GCCCCTCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 67224641 67224656 6.0E-06 TCAAGATAAACACAGC 16 V_DLX7_01_M01486 TRANSFAC - 67224688 67224704 2.0E-06 ACTAAATAATTACCACC 17 V_ZFP187_04_M02934 TRANSFAC - 67219538 67219553 8.0E-06 CAGCCCTGGTCCATGC 16 V_T3R_01_M00239 TRANSFAC - 67226248 67226263 3.0E-06 GCTTGAGGTCAAGCAC 16 V_MAZR_01_M00491 TRANSFAC + 67220791 67220803 3.0E-06 GGGGGAGGGGCCA 13 V_GABPBETA_Q3_M01876 TRANSFAC + 67219749 67219759 1.0E-05 AGAGGAAGGGA 11 V_GABPBETA_Q3_M01876 TRANSFAC + 67226067 67226077 7.0E-06 AGCGGAAGTGG 11 V_BRN4_01_M01473 TRANSFAC - 67224689 67224705 5.0E-06 CACTAAATAATTACCAC 17 V_BRN4_01_M01473 TRANSFAC + 67224690 67224706 7.0E-06 TGGTAATTATTTAGTGG 17 V_AP1FJ_Q2_M00172 TRANSFAC + 67220514 67220524 7.0E-06 AGTGACTCACT 11 V_CBF_01_M01079 TRANSFAC + 67224697 67224712 9.0E-06 TATTTAGTGGATGTTC 16 V_NKX61_02_M01469 TRANSFAC - 67224689 67224704 1.0E-06 ACTAAATAATTACCAC 16 V_IPF1_01_M01233 TRANSFAC - 67224692 67224701 1.0E-05 AAATAATTAC 10 V_FPM315_01_M01587 TRANSFAC - 67224075 67224086 9.0E-06 GAGGGAGGAGCC 12 V_PADS_C_M00211 TRANSFAC + 67225746 67225754 4.0E-06 TGTGGTCTC 9 V_PITX2_Q2_M00482 TRANSFAC + 67221888 67221898 1.0E-06 TGTAATCCCAG 11 V_PBX1_02_M00124 TRANSFAC + 67221700 67221714 6.0E-06 GCCATCAATCAGAGT 15 V_REST_02_M02256 TRANSFAC + 67219416 67219436 0.0E+00 TTCAGGACCAAGGCCAAGGCC 21 V_PBX1_03_M01017 TRANSFAC + 67221701 67221712 2.0E-06 CCATCAATCAGA 12 V_PLZF_02_M01075 TRANSFAC - 67224686 67224714 6.0E-06 CTGAACATCCACTAAATAATTACCACCTT 29 V_SMAD_Q6_01_M00974 TRANSFAC - 67220639 67220649 4.0E-06 TGGCCAGACAG 11 V_ZFP281_01_M01597 TRANSFAC + 67220790 67220800 2.0E-06 GGGGGGAGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 67219642 67219655 3.0E-06 CGGTTTCTGTTTCC 14 V_SOX2_01_M02246 TRANSFAC - 67220661 67220675 1.0E-05 CCATTGTGCTGCAGG 15 V_DLX3_02_M02051 TRANSFAC - 67224692 67224699 5.0E-06 ATAATTAC 8 V_EWSR1FLI1_01_M02252 TRANSFAC - 67220592 67220609 5.0E-06 GAGAGGAAGGAGGGAGGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 67220596 67220613 0.0E+00 GGAGGAGAGGAAGGAGGG 18 V_FOXJ2_01_M00422 TRANSFAC - 67224640 67224657 5.0E-06 CTCAAGATAAACACAGCT 18 V_ZIC3_04_M02837 TRANSFAC - 67221622 67221636 1.0E-05 GCACCCCTGGGGGGC 15 V_NFE2_Q6_M02104 TRANSFAC + 67220445 67220460 5.0E-06 AGTGCCTCAGCAAACC 16 V_HOXD8_01_M01432 TRANSFAC - 67224686 67224702 7.0E-06 TAAATAATTACCACCTT 17 V_NFE2_01_M00037 TRANSFAC - 67220446 67220456 8.0E-06 TGCTGAGGCAC 11 V_PAX4_02_M00377 TRANSFAC - 67224691 67224701 0.0E+00 AAATAATTACC 11 V_LHX9_01_M01367 TRANSFAC - 67224691 67224707 7.0E-06 TCCACTAAATAATTACC 17 V_P300_01_M00033 TRANSFAC + 67219753 67219766 0.0E+00 GAAGGGAGTGTGTG 14 V_SP1_Q4_01_M00932 TRANSFAC + 67220790 67220802 5.0E-06 GGGGGGAGGGGCC 13 V_TAACC_B_M00331 TRANSFAC + 67220521 67220543 8.0E-06 CACTGACCAGGCTGGCCACACGA 23 V_ELK1_03_M01163 TRANSFAC + 67226066 67226076 1.0E-05 AAGCGGAAGTG 11 V_ZIC2_04_M02836 TRANSFAC - 67221622 67221636 8.0E-06 GCACCCCTGGGGGGC 15 V_BRCA_01_M01082 TRANSFAC - 67224098 67224105 1.0E-05 TTCTGTTG 8 V_T3RALPHA_Q6_M01724 TRANSFAC - 67219243 67219253 3.0E-06 CTTCAGGTCAG 11 V_T3RALPHA_Q6_M01724 TRANSFAC - 67226252 67226262 2.0E-06 CTTGAGGTCAA 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.