Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC25A47 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 283600 solute carrier family 25, member 47 chr14 + 100784678 - 100790178 100789678 Transcription Factor Binding Sites   Download all TFBS in the SLC25A47 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 100784708 100784726 3.0E-06 TGTCCCCTAGGGGGCGGCA 19 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 100786974 100786991 1.0E-06 GAGGGTCAAGTTAGGGCA 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 100788330 100788341 1.0E-06 CCTATAAATAGC 12 Tp53_p53l_DBD_dimeric_18_2 SELEX + 100786978 100786995 2.0E-06 GTCAAGTTAGGGCATGTT 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 100786978 100786995 1.0E-06 AACATGCCCTAACTTGAC 18 TBP_MA0108.2 JASPAR + 100788331 100788345 0.0E+00 CTATAAATAGCCGGG 15 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 100786975 100786991 4.0E-06 AGGGTCAAGTTAGGGCA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX + 100786974 100786991 4.0E-06 GAGGGTCAAGTTAGGGCA 18 Tp73_p53l_DBD_dimeric_18_1 SELEX - 100786978 100786995 2.0E-06 AACATGCCCTAACTTGAC 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 100788330 100788341 1.0E-06 CCTATAAATAGC 12 MEF2B_MADS_full_dimeric_12_1 SELEX + 100788330 100788341 1.0E-06 CCTATAAATAGC 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 100788330 100788341 8.0E-06 GCTATTTATAGG 12 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 100786975 100786991 4.0E-06 AGGGTCAAGTTAGGGCA 17 MEF2A_MA0052.1 JASPAR + 100788331 100788340 6.0E-06 CTATAAATAG 10 MEF2A_MA0052.1 JASPAR - 100788331 100788340 0.0E+00 CTATTTATAG 10 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 100786975 100786991 1.0E-05 AGGGTCAAGTTAGGGCA 17 RFX5_RFX_DBD_dimeric_16_3 SELEX - 100784690 100784705 2.0E-06 CGTTGCCCAAGCAACC 16 TP53_MA0106.1 JASPAR - 100786979 100786998 0.0E+00 ACAAACATGCCCTAACTTGA 20 TP63_p53l_DBD_dimeric_18_1 SELEX + 100786978 100786995 1.0E-06 GTCAAGTTAGGGCATGTT 18 TP63_p53l_DBD_dimeric_18_1 SELEX - 100786978 100786995 2.0E-06 AACATGCCCTAACTTGAC 18 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 100786949 100786962 6.0E-06 AGAAATAGAAAACA 14 V_HNF3B_01_M00131 TRANSFAC + 100786987 100787001 4.0E-06 GGGCATGTTTGTTCA 15 V_YY1_02_M00069 TRANSFAC - 100786925 100786944 6.0E-06 ACCCCACCATTTAGGCTGCT 20 V_SREBP2_Q6_M01177 TRANSFAC - 100786938 100786949 0.0E+00 AGGCCACCCCAC 12 V_LRH1_Q5_01_M02098 TRANSFAC + 100788383 100788393 6.0E-06 GCTCAAGGCCA 11 V_MEF2_02_M00231 TRANSFAC + 100788324 100788345 5.0E-06 CACTTGCCTATAAATAGCCGGG 22 V_TR4_Q2_M01725 TRANSFAC - 100784936 100784946 6.0E-06 CGTGACCTCTC 11 V_COUPTF_Q6_M01036 TRANSFAC + 100788269 100788291 3.0E-06 CTTCCCGCCCTTTGCCCTCTGCC 23 V_LDSPOLYA_B_M00317 TRANSFAC + 100786945 100786960 2.0E-06 GGCCTGTTTTCTATTT 16 V_HNF3G_Q4_M02015 TRANSFAC + 100786992 100786999 7.0E-06 TGTTTGTT 8 V_HNF4_01_B_M00411 TRANSFAC + 100787002 100787016 9.0E-06 GGAGACAAAGGGCAG 15 V_TATA_01_M00252 TRANSFAC + 100788331 100788345 0.0E+00 CTATAAATAGCCGGG 15 V_P53_03_M01651 TRANSFAC + 100786977 100786996 1.0E-06 GGTCAAGTTAGGGCATGTTT 20 V_P53_03_M01651 TRANSFAC - 100786977 100786996 1.0E-06 AAACATGCCCTAACTTGACC 20 V_RSRFC4_Q2_M00407 TRANSFAC - 100788327 100788343 5.0E-06 CGGCTATTTATAGGCAA 17 V_HNF3_Q6_M00791 TRANSFAC - 100786990 100787002 4.0E-06 CTGAACAAACATG 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 100786992 100787002 5.0E-06 TGTTTGTTCAG 11 V_LXR_DR4_Q3_M00766 TRANSFAC - 100786976 100786991 3.0E-06 TGCCCTAACTTGACCC 16 V_MEF2_03_M00232 TRANSFAC + 100788324 100788345 8.0E-06 CACTTGCCTATAAATAGCCGGG 22 V_NFE4_Q5_M02105 TRANSFAC - 100792585 100792596 9.0E-06 CTCCCTACCCAG 12 V_ZBRK1_01_M01105 TRANSFAC - 100784701 100784715 4.0E-06 GGGCGGCAGACGTTG 15 V_MEF2_Q6_01_M00941 TRANSFAC - 100788331 100788342 1.0E-06 GGCTATTTATAG 12 V_SMAD4_Q6_M00733 TRANSFAC + 100788184 100788198 1.0E-06 GGCAGGCAGCCAGCT 15 V_TBP_01_M00471 TRANSFAC + 100788332 100788339 4.0E-06 TATAAATA 8 V_HAND1E47_01_M00222 TRANSFAC + 100792521 100792536 2.0E-06 ACAGGCATCTGGCACT 16 V_PLAG1_01_M01778 TRANSFAC - 100787062 100787077 9.0E-06 GAGGCCCCAGAAGGTG 16 V_ZFP161_04_M02933 TRANSFAC + 100784755 100784768 5.0E-06 GCCGCGCACAGCGT 14 V_MTATA_B_M00320 TRANSFAC + 100788329 100788345 2.0E-06 GCCTATAAATAGCCGGG 17 V_P53_05_M01655 TRANSFAC + 100786977 100786996 8.0E-06 GGTCAAGTTAGGGCATGTTT 20 V_P53_04_M01652 TRANSFAC + 100786977 100786996 1.0E-06 GGTCAAGTTAGGGCATGTTT 20 V_P53_04_M01652 TRANSFAC - 100786977 100786996 3.0E-06 AAACATGCCCTAACTTGACC 20 V_RSRFC4_01_M00026 TRANSFAC + 100788328 100788343 5.0E-06 TGCCTATAAATAGCCG 16 V_P63_01_M01656 TRANSFAC + 100786977 100786996 1.0E-06 GGTCAAGTTAGGGCATGTTT 20 V_ARP1_01_M00155 TRANSFAC - 100792573 100792588 7.0E-06 CCAGCCCCTGGCCCCA 16 V_MEF2A_05_M01301 TRANSFAC - 100788331 100788342 1.0E-06 GGCTATTTATAG 12 V_RFX1_02_M00281 TRANSFAC - 100784689 100784706 4.0E-06 ACGTTGCCCAAGCAACCA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.