Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C11orf85 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 283129 chromosome 11 open reading frame 85 chr11 - 64727109 - 64732609 64727609 Transcription Factor Binding Sites   Download all TFBS in the C11orf85 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 64722857 64722865 6.0E-06 GTGATAAAA 9 NF-kappaB_MA0061.1 JASPAR - 64728266 64728275 9.0E-06 GGGAAATTCC 10 Tp53_p53l_DBD_dimeric_18_1 SELEX - 64722836 64722853 2.0E-06 ACATTTAAAGAGACATGT 18 SPIC_ETS_full_monomeric_14_1 SELEX + 64722861 64722874 3.0E-06 TAAAACACGAAGTA 14 TEF_bZIP_DBD_dimeric_12_1 SELEX + 64731893 64731904 2.0E-06 AGTTACATAATC 12 TEF_bZIP_DBD_dimeric_12_1 SELEX - 64731893 64731904 6.0E-06 GATTATGTAACT 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 64727140 64727148 2.0E-06 TATGCAAAT 9 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 64728267 64728278 7.0E-06 GAATTTCCCACA 12 SRY_HMG_DBD_dimeric_16_1 SELEX + 64728275 64728290 8.0E-06 CACAATTTCCAAAGTT 16 POU2F3_POU_DBD_monomeric_9_1 SELEX + 64727140 64727148 2.0E-06 TATGCAAAT 9 HLF_bZIP_full_dimeric_12_1 SELEX + 64731893 64731904 2.0E-06 AGTTACATAATC 12 HLF_bZIP_full_dimeric_12_1 SELEX - 64731893 64731904 7.0E-06 GATTATGTAACT 12 POU1F1_POU_DBD_monomeric_14_1 SELEX + 64727138 64727151 1.0E-06 CTTATGCAAATCAT 14 NFIL3_MA0025.1 JASPAR - 64731892 64731902 1.0E-06 TTATGTAACTT 11 POU2F2_POU_DBD_monomeric_11_1 SELEX + 64727139 64727149 1.0E-06 TTATGCAAATC 11 DBP_bZIP_full_dimeric_12_1 SELEX + 64731893 64731904 4.0E-06 AGTTACATAATC 12 DBP_bZIP_full_dimeric_12_1 SELEX - 64731893 64731904 5.0E-06 GATTATGTAACT 12 POU3F4_POU_DBD_monomeric_9_1 SELEX + 64727140 64727148 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 64727140 64727148 2.0E-06 TATGCAAAT 9 NR2F1_MA0017.1 JASPAR - 64728279 64728292 1.0E-06 TGAACTTTGGAAAT 14 REL_MA0101.1 JASPAR + 64728265 64728274 6.0E-06 TGGAATTTCC 10 POU3F3_POU_DBD_monomeric_13_1 SELEX + 64727138 64727150 4.0E-06 CTTATGCAAATCA 13 RELA_MA0107.1 JASPAR + 64728265 64728274 3.0E-06 TGGAATTTCC 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 64728279 64728294 8.0E-06 ATTTCCAAAGTTCAAG 16 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 64728279 64728293 8.0E-06 ATTTCCAAAGTTCAA 15 NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 64731893 64731904 2.0E-06 AGTTACATAATC 12 POU1F1_POU_DBD_monomeric_17_1 SELEX - 64722866 64722882 2.0E-06 TTTATGCATACTTCGTG 17 POU3F1_POU_DBD_monomeric_12_1 SELEX + 64727139 64727150 1.0E-06 TTATGCAAATCA 12 POU2F1_POU_DBD_monomeric_12_1 SELEX + 64727138 64727149 1.0E-06 CTTATGCAAATC 12 HLF_MA0043.1 JASPAR + 64731893 64731904 8.0E-06 AGTTACATAATC 12 ZNF410_C2H2_DBD_monomeric_17_1 SELEX + 64722893 64722909 5.0E-06 TGCATACCAAAATATGA 17 POU3F2_POU_DBD_monomeric_12_1 SELEX + 64727139 64727150 0.0E+00 TTATGCAAATCA 12 V_NFKAPPAB65_01_M00052 TRANSFAC + 64728265 64728274 1.0E-06 TGGAATTTCC 10 V_AP1_Q2_M00173 TRANSFAC + 64727190 64727200 4.0E-06 GATGACTCAGA 11 V_NFKB_Q6_01_M00774 TRANSFAC - 64728264 64728279 2.0E-06 TTGTGGGAAATTCCAT 16 V_POU3F3_01_M03090 TRANSFAC + 64722869 64722885 3.0E-06 GAAGTATGCATAAAGCG 17 V_POU3F3_01_M03090 TRANSFAC - 64727135 64727151 7.0E-06 ATGATTTGCATAAGGTC 17 V_EVI1_05_M00082 TRANSFAC + 64722902 64722912 7.0E-06 AAATATGATAG 11 V_BCL6_01_M01183 TRANSFAC + 64722973 64722988 1.0E-06 CTTCATGGAATATTTT 16 V_FOXJ2_02_M00423 TRANSFAC - 64722846 64722859 7.0E-06 CACATAACATTTAA 14 V_OCT1_Q5_01_M00930 TRANSFAC - 64727140 64727150 0.0E+00 TGATTTGCATA 11 V_OCTAMER_01_M01324 TRANSFAC + 64722869 64722885 3.0E-06 GAAGTATGCATAAAGCG 17 V_OCTAMER_01_M01324 TRANSFAC - 64727135 64727151 7.0E-06 ATGATTTGCATAAGGTC 17 V_OCT1_01_M00135 TRANSFAC + 64727135 64727153 3.0E-06 GACCTTATGCAAATCATTT 19 V_POU2F3_01_M01476 TRANSFAC + 64727137 64727152 1.0E-06 CCTTATGCAAATCATT 16 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 64728266 64728277 0.0E+00 GGAATTTCCCAC 12 V_OCT_C_M00210 TRANSFAC - 64727139 64727151 0.0E+00 ATGATTTGCATAA 13 V_AP1_Q6_M00174 TRANSFAC + 64727190 64727200 4.0E-06 GATGACTCAGA 11 V_HMGA2_01_M01300 TRANSFAC - 64728268 64728282 3.0E-06 AAATTGTGGGAAATT 15 V_RPC155_01_M01798 TRANSFAC + 64728282 64728297 3.0E-06 TCCAAAGTTCAAGTCT 16 V_FOXA2_02_M02853 TRANSFAC - 64727201 64727215 9.0E-06 AATTCTAACAAAGAC 15 V_DBP_Q6_01_M01872 TRANSFAC - 64731895 64731902 5.0E-06 TTATGTAA 8 V_CEBPE_Q6_M01868 TRANSFAC + 64728275 64728288 5.0E-06 CACAATTTCCAAAG 14 V_E4BP4_01_M00045 TRANSFAC - 64731893 64731904 3.0E-06 GATTATGTAACT 12 V_COUP_01_M00158 TRANSFAC - 64728279 64728292 1.0E-06 TGAACTTTGGAAAT 14 V_CREL_01_M00053 TRANSFAC + 64728265 64728274 6.0E-06 TGGAATTTCC 10 V_AP1_Q6_01_M00925 TRANSFAC + 64727191 64727199 7.0E-06 ATGACTCAG 9 V_NFKB_Q6_M00194 TRANSFAC + 64728263 64728276 4.0E-06 AATGGAATTTCCCA 14 V_ARID3A_02_M02839 TRANSFAC - 64722902 64722916 1.0E-06 ATAACTATCATATTT 15 V_OCT1_05_M00161 TRANSFAC - 64727138 64727151 1.0E-06 ATGATTTGCATAAG 14 V_OCT1_04_M00138 TRANSFAC + 64727133 64727155 3.0E-06 ATGACCTTATGCAAATCATTTCT 23 V_ERR1_Q3_M01841 TRANSFAC - 64722844 64722858 9.0E-06 ACATAACATTTAAAG 15 V_GR_Q6_M00192 TRANSFAC + 64727234 64727252 6.0E-06 TCTCTTGAATCTGTTCTTC 19 V_AP1_C_M00199 TRANSFAC + 64727191 64727199 6.0E-06 ATGACTCAG 9 V_OCAB_Q6_M02113 TRANSFAC + 64727139 64727149 1.0E-06 TTATGCAAATC 11 V_MEF2_Q6_01_M00941 TRANSFAC + 64722911 64722922 9.0E-06 AGTTATTTTAGG 12 V_NCX_02_M01420 TRANSFAC - 64727208 64727224 3.0E-06 GAAACATTTAATTCTAA 17 V_HNF4A_Q6_01_M02016 TRANSFAC + 64728281 64728295 4.0E-06 TTCCAAAGTTCAAGT 15 V_NR1B1_Q6_M02110 TRANSFAC + 64728285 64728294 9.0E-06 AAAGTTCAAG 10 V_OCT1_B_M00342 TRANSFAC + 64727140 64727149 1.0E-06 TATGCAAATC 10 V_AP1_Q2_01_M00924 TRANSFAC + 64727192 64727203 8.0E-06 TGACTCAGAGTC 12 V_OCT_Q6_M00795 TRANSFAC - 64727140 64727150 0.0E+00 TGATTTGCATA 11 V_VBP_01_M00228 TRANSFAC + 64731894 64731903 0.0E+00 GTTACATAAT 10 V_AP1_Q4_01_M00926 TRANSFAC - 64727191 64727198 1.0E-05 TGAGTCAT 8 V_OCT2_01_M01368 TRANSFAC + 64727137 64727152 2.0E-06 CCTTATGCAAATCATT 16 V_BARHL1_01_M01332 TRANSFAC - 64727211 64727226 9.0E-06 GAGAAACATTTAATTC 16 V_FOXL1_02_M02857 TRANSFAC - 64727201 64727216 9.0E-06 TAATTCTAACAAAGAC 16 V_OCT1_Q6_M00195 TRANSFAC + 64727137 64727151 5.0E-06 CCTTATGCAAATCAT 15 V_HNF4_Q6_01_M01031 TRANSFAC + 64728280 64728293 7.0E-06 TTTCCAAAGTTCAA 14 V_AIRE_01_M00999 TRANSFAC - 64728268 64728293 3.0E-06 TTGAACTTTGGAAATTGTGGGAAATT 26 V_RBPJK_01_M01112 TRANSFAC - 64728270 64728280 4.0E-06 ATTGTGGGAAA 11 V_FRA1_Q5_M01267 TRANSFAC - 64727191 64727198 1.0E-05 TGAGTCAT 8 V_RARA_03_M02787 TRANSFAC + 64728281 64728296 1.0E-05 TTCCAAAGTTCAAGTC 16 V_DMRT2_01_M01147 TRANSFAC - 64731889 64731904 2.0E-06 GATTATGTAACTTTGT 16 V_NFKAPPAB_01_M00054 TRANSFAC - 64728266 64728275 7.0E-06 GGGAAATTCC 10 V_STAT5A_01_M00457 TRANSFAC - 64728268 64728282 7.0E-06 AAATTGTGGGAAATT 15 V_HLF_01_M00260 TRANSFAC + 64731894 64731903 1.0E-06 GTTACATAAT 10 V_HOMEZ_01_M01429 TRANSFAC + 64722904 64722920 7.0E-06 ATATGATAGTTATTTTA 17 V_MEF2_01_M00006 TRANSFAC - 64727198 64727213 9.0E-06 TTCTAACAAAGACTCT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.