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GNRH1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2796 chr8 + 25277556 - 25287556 0 Transcription Factor Binding Sites   Download all TFBS in the GNRH1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 25281106 25281115 2.0E-06 ACAATAAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 25281106 25281115 2.0E-06 ACAATAAAAA 10 NFIA_NFI_full_dimeric_15_1 SELEX + 25280504 25280518 7.0E-06 TTGGAATTTTTCCAG 15 SPIC_ETS_full_monomeric_14_1 SELEX + 25280338 25280351 8.0E-06 GAAATGAGGAAAAA 14 SRY_HMG_DBD_dimeric_15_1 SELEX + 25280414 25280428 9.0E-06 CCCTATCCCATTGTT 15 POU3F3_POU_DBD_monomeric_12_1 SELEX - 25280492 25280503 2.0E-06 AAGAATATATTA 12 SOX2_HMG_full_dimeric_17_1 SELEX + 25281311 25281327 1.0E-05 TACTAATGACATTTTTC 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 25281094 25281110 9.0E-06 AAAAATAAAAGTATAGA 17 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 25280487 25280498 7.0E-06 TATATTAATAGC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 25281102 25281113 6.0E-06 AATAAAAATAAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 25280492 25280504 5.0E-06 AAAGAATATATTA 13 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 25279990 25279998 7.0E-06 AGAAGTCAA 9 NFIX_NFI_full_dimeric_15_2 SELEX + 25280504 25280518 8.0E-06 TTGGAATTTTTCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 25280504 25280518 2.0E-06 CTGGAAAAATTCCAA 15 SOX9_HMG_DBD_monomeric_9_1 SELEX - 25280421 25280429 9.0E-06 AAACAATGG 9 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 25280487 25280498 6.0E-06 GCTATTAATATA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 25280487 25280498 4.0E-06 TATATTAATAGC 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 25281102 25281113 3.0E-06 AATAAAAATAAA 12 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 25280478 25280490 4.0E-06 TAGCAACAAGTGT 13 MEF2B_MADS_full_dimeric_12_1 SELEX - 25280487 25280498 7.0E-06 TATATTAATAGC 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 25281107 25281116 3.0E-06 AACAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 25281107 25281115 7.0E-06 ACAATAAAA 9 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 25279906 25279920 9.0E-06 AACTAATTTTTAAAA 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 25281106 25281116 1.0E-06 AACAATAAAAA 11 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 25280039 25280052 8.0E-06 AGATAACACAGCGA 14 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 25280476 25280490 3.0E-06 TAGCAACAAGTGTGA 15 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 25281106 25281115 2.0E-06 ACAATAAAAA 10 MGA_TBX_DBD_dimeric_18_1 SELEX + 25280466 25280483 5.0E-06 ACGTGCTGTCTCACACTT 18 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 25281097 25281111 9.0E-06 TAAAAATAAAAGTAT 15 POU3F1_POU_DBD_monomeric_12_2 SELEX - 25280492 25280503 6.0E-06 AAGAATATATTA 12 Hltf_MA0109.1 JASPAR + 25281097 25281106 6.0E-06 ATACTTTTAT 10 NFIB_NFI_full_dimeric_15_1 SELEX + 25280504 25280518 5.0E-06 TTGGAATTTTTCCAG 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 25281106 25281115 4.0E-06 ACAATAAAAA 10 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 25281106 25281116 9.0E-06 AACAATAAAAA 11 CPEB1_RRM_full_monomeric_8_1 SELEX - 25281106 25281113 4.0E-06 AATAAAAA 8 SOX9_MA0077.1 JASPAR - 25280421 25280429 2.0E-06 AAACAATGG 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 25281106 25281116 6.0E-06 AACAATAAAAA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 25281100 25281112 6.0E-06 ATAAAAATAAAAG 13 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 25281107 25281115 6.0E-06 ACAATAAAA 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 25281104 25281116 9.0E-06 AACAATAAAAATA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 25281322 25281334 6.0E-06 ATAAATAGAAAAA 13 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 25281107 25281115 6.0E-06 ACAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 25281106 25281116 3.0E-06 AACAATAAAAA 11 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 25281106 25281115 6.0E-06 ACAATAAAAA 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 25281106 25281119 3.0E-06 CCAAACAATAAAAA 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 25281287 25281298 9.0E-06 TGACATTACATG 12 V_RUSH1A_02_M01107 TRANSFAC + 25281097 25281106 6.0E-06 ATACTTTTAT 10 V_HOXA9_01_M01351 TRANSFAC - 25281102 25281118 2.0E-06 CAAACAATAAAAATAAA 17 V_FOXP1_01_M00987 TRANSFAC - 25280066 25280085 7.0E-06 TTGTTTTTTGGGGTTATTTT 20 V_FOXP1_01_M00987 TRANSFAC + 25281091 25281110 7.0E-06 TAGTCTATACTTTTATTTTT 20 V_FOXP1_01_M00987 TRANSFAC + 25281097 25281116 1.0E-06 ATACTTTTATTTTTATTGTT 20 V_FOXP1_01_M00987 TRANSFAC + 25281103 25281122 0.0E+00 TTATTTTTATTGTTTGGTTA 20 V_HNF3B_01_M00131 TRANSFAC + 25281108 25281122 3.0E-06 TTTATTGTTTGGTTA 15 V_AP1_Q2_M00173 TRANSFAC - 25281225 25281235 4.0E-06 GATGACTCAGT 11 V_DBX1_01_M01483 TRANSFAC - 25279905 25279921 7.0E-06 CAACTAATTTTTAAAAC 17 V_DBX1_01_M01483 TRANSFAC - 25280485 25280501 3.0E-06 GAATATATTAATAGCAA 17 V_GEN_INI_B_M00315 TRANSFAC - 25280339 25280346 1.0E-05 CCTCATTT 8 V_SOX30_03_M02804 TRANSFAC - 25280417 25280432 6.0E-06 TAGAAACAATGGGATA 16 V_HMGIY_Q3_M01010 TRANSFAC + 25280503 25280517 5.0E-06 TTTGGAATTTTTCCA 15 V_NKX29_01_M01352 TRANSFAC - 25281043 25281059 2.0E-06 GCTTAAGTACTCATTTT 17 V_NKX29_01_M01352 TRANSFAC + 25281044 25281060 5.0E-06 AAATGAGTACTTAAGCT 17 V_NKX29_01_M01352 TRANSFAC + 25281076 25281092 7.0E-06 TTTTTAGTACTAAAATA 17 V_BCL6_01_M01183 TRANSFAC - 25279902 25279917 1.0E-06 TAATTTTTAAAACTTT 16 V_BCL6_01_M01183 TRANSFAC + 25280489 25280504 0.0E+00 TATTAATATATTCTTT 16 V_HOXA13_02_M01297 TRANSFAC - 25281100 25281108 9.0E-06 AAATAAAAG 9 V_SATB1_Q3_M01723 TRANSFAC + 25281309 25281324 2.0E-06 GGTACTAATGACATTT 16 V_SOX5_01_M00042 TRANSFAC - 25281109 25281118 7.0E-06 CAAACAATAA 10 V_PROP1_01_M01294 TRANSFAC + 25280431 25280441 8.0E-06 TAATTCCTTTA 11 V_MEF2_02_M00231 TRANSFAC + 25280481 25280502 7.0E-06 CTTGTTGCTATTAATATATTCT 22 V_SRY_02_M00160 TRANSFAC - 25281108 25281119 1.0E-05 CCAAACAATAAA 12 V_NFAT3_Q3_M01734 TRANSFAC - 25280344 25280353 6.0E-06 TTTTTTTCCT 10 V_FOXO3A_Q1_M01137 TRANSFAC + 25280077 25280088 8.0E-06 AAAAAACAAGAA 12 V_FOXO3A_Q1_M01137 TRANSFAC - 25281100 25281111 5.0E-06 TAAAAATAAAAG 12 V_HNF3_Q6_01_M01012 TRANSFAC + 25281108 25281125 1.0E-06 TTTATTGTTTGGTTATCC 18 V_HNF3_Q6_01_M01012 TRANSFAC + 25281323 25281340 7.0E-06 TTTTCTATTTATCCTTCA 18 V_PU1_Q4_M01172 TRANSFAC - 25280339 25280357 0.0E+00 GTTTTTTTTTTCCTCATTT 19 V_HOXD13_01_M01404 TRANSFAC + 25279892 25279907 6.0E-06 ATCTCTATAAAAAGTT 16 V_HOXD13_01_M01404 TRANSFAC - 25281103 25281118 1.0E-06 CAAACAATAAAAATAA 16 V_SOX21_03_M02803 TRANSFAC + 25281101 25281116 6.0E-06 TTTTATTTTTATTGTT 16 V_SOX21_03_M02803 TRANSFAC - 25281101 25281116 9.0E-06 AACAATAAAAATAAAA 16 V_TCFAP2E_04_M02926 TRANSFAC + 25280341 25280354 5.0E-06 ATGAGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 25280342 25280355 3.0E-06 TGAGGAAAAAAAAA 14 V_MEF2A_Q6_M02024 TRANSFAC + 25281104 25281113 8.0E-06 TATTTTTATT 10 V_AP1_Q6_M00174 TRANSFAC - 25281225 25281235 0.0E+00 GATGACTCAGT 11 V_ELF4_04_M02850 TRANSFAC - 25281097 25281113 8.0E-06 AATAAAAATAAAAGTAT 17 V_SOX7_03_M02807 TRANSFAC - 25280414 25280435 9.0E-06 AATTAGAAACAATGGGATAGGG 22 V_SOX7_03_M02807 TRANSFAC - 25281102 25281123 0.0E+00 ATAACCAAACAATAAAAATAAA 22 V_GEN_INI3_B_M00314 TRANSFAC - 25280339 25280346 1.0E-05 CCTCATTT 8 V_HELIOSA_02_M01004 TRANSFAC + 25280341 25280351 7.0E-06 ATGAGGAAAAA 11 V_HELIOSA_02_M01004 TRANSFAC - 25280371 25280381 2.0E-06 ATTTGGAAAAA 11 V_POU3F2_01_M00463 TRANSFAC - 25280490 25280503 1.0E-06 AAGAATATATTAAT 14 V_IPF1_Q4_M00436 TRANSFAC + 25281310 25281321 2.0E-06 GTACTAATGACA 12 V_CEBPE_Q6_M01868 TRANSFAC + 25281277 25281290 3.0E-06 TAAAATTGCTTGAC 14 V_ZFP105_03_M02827 TRANSFAC + 25280074 25280088 2.0E-06 CCCAAAAAACAAGAA 15 V_ZFP105_03_M02827 TRANSFAC - 25281102 25281116 1.0E-06 AACAATAAAAATAAA 15 V_ZFP105_03_M02827 TRANSFAC - 25281103 25281117 2.0E-06 AAACAATAAAAATAA 15 V_ZFP105_03_M02827 TRANSFAC - 25281106 25281120 2.0E-06 ACCAAACAATAAAAA 15 V_HOXB13_01_M01467 TRANSFAC - 25281103 25281118 1.0E-06 CAAACAATAAAAATAA 16 V_ZFP410_03_M02832 TRANSFAC - 25280412 25280428 8.0E-06 AACAATGGGATAGGGTC 17 V_RSRFC4_Q2_M00407 TRANSFAC - 25280484 25280500 6.0E-06 AATATATTAATAGCAAC 17 V_RSRFC4_Q2_M00407 TRANSFAC + 25280485 25280501 5.0E-06 TTGCTATTAATATATTC 17 V_AMEF2_Q6_M00403 TRANSFAC + 25279892 25279909 3.0E-06 ATCTCTATAAAAAGTTTT 18 V_AP1_Q6_01_M00925 TRANSFAC - 25281226 25281234 7.0E-06 ATGACTCAG 9 V_HOXB9_01_M01426 TRANSFAC - 25281103 25281118 1.0E-06 CAAACAATAAAAATAA 16 V_AP1_Q4_M00188 TRANSFAC - 25281225 25281235 5.0E-06 GATGACTCAGT 11 V_FOXK1_04_M02856 TRANSFAC - 25281104 25281118 2.0E-06 CAAACAATAAAAATA 15 V_HNF3_Q6_M00791 TRANSFAC - 25281111 25281123 5.0E-06 ATAACCAAACAAT 13 V_SOX_Q6_M01014 TRANSFAC + 25280519 25280531 1.0E-06 CTCTTTGTTTAGT 13 V_MEF2_03_M00232 TRANSFAC + 25280481 25280502 1.0E-06 CTTGTTGCTATTAATATATTCT 22 V_TATA_C_M00216 TRANSFAC + 25279895 25279904 1.0E-06 TCTATAAAAA 10 V_OCT1_04_M00138 TRANSFAC + 25280317 25280339 4.0E-06 GCATAGATATGTTTAAAAGATGA 23 V_OCT1_04_M00138 TRANSFAC - 25281153 25281175 5.0E-06 AAATGTTAAGGCAAAATGATGAA 23 V_MEF2_04_M00233 TRANSFAC + 25280481 25280502 4.0E-06 CTTGTTGCTATTAATATATTCT 22 V_RREB1_01_M00257 TRANSFAC + 25280073 25280086 6.0E-06 CCCCAAAAAACAAG 14 V_AP1_C_M00199 TRANSFAC - 25281226 25281234 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC + 25281101 25281112 8.0E-06 TTTTATTTTTAT 12 V_NCX_02_M01420 TRANSFAC - 25280485 25280501 0.0E+00 GAATATATTAATAGCAA 17 V_TBP_06_M02814 TRANSFAC - 25279903 25279918 3.0E-06 CTAATTTTTAAAACTT 16 V_TBP_06_M02814 TRANSFAC - 25280489 25280504 9.0E-06 AAAGAATATATTAATA 16 V_SOX11_03_M02795 TRANSFAC - 25280417 25280433 4.0E-06 TTAGAAACAATGGGATA 17 V_SOX9_B1_M00410 TRANSFAC - 25280419 25280432 1.0E-06 TAGAAACAATGGGA 14 V_NKX23_01_M01457 TRANSFAC - 25281044 25281059 4.0E-06 GCTTAAGTACTCATTT 16 V_ICSBP_Q6_M00699 TRANSFAC + 25280540 25280551 3.0E-06 GAACTGAAAGTA 12 V_FOXO1_Q5_M01216 TRANSFAC + 25280078 25280086 8.0E-06 AAAAACAAG 9 V_OTX2_Q3_M01719 TRANSFAC - 25280428 25280440 9.0E-06 AAAGGAATTAGAA 13 V_ELF1_Q6_M00746 TRANSFAC + 25280339 25280350 6.0E-06 AAATGAGGAAAA 12 V_AP1_Q4_01_M00926 TRANSFAC + 25281227 25281234 1.0E-05 TGAGTCAT 8 V_SOX15_03_M02799 TRANSFAC - 25281105 25281121 3.0E-06 AACCAAACAATAAAAAT 17 V_MTF1_06_M02882 TRANSFAC - 25281101 25281114 5.0E-06 CAATAAAAATAAAA 14 V_MTF1_06_M02882 TRANSFAC - 25281104 25281117 2.0E-06 AAACAATAAAAATA 14 V_FAC1_01_M00456 TRANSFAC + 25280347 25280360 4.0E-06 AAAAAAAAAACGAA 14 V_HOXB8_01_M01451 TRANSFAC + 25280483 25280498 3.0E-06 TGTTGCTATTAATATA 16 V_AP1FJ_Q2_M00172 TRANSFAC - 25281225 25281235 7.0E-06 GATGACTCAGT 11 V_FOXL1_02_M02857 TRANSFAC - 25281108 25281123 0.0E+00 ATAACCAAACAATAAA 16 V_FOXL1_04_M02753 TRANSFAC - 25281099 25281115 8.0E-06 ACAATAAAAATAAAAGT 17 V_FOXJ3_06_M02855 TRANSFAC - 25281108 25281124 3.0E-06 GATAACCAAACAATAAA 17 V_NKX3A_02_M01383 TRANSFAC - 25281043 25281059 1.0E-05 GCTTAAGTACTCATTTT 17 V_NKX3A_02_M01383 TRANSFAC + 25281044 25281060 3.0E-06 AAATGAGTACTTAAGCT 17 V_GEN_INI2_B_M00313 TRANSFAC - 25280339 25280346 1.0E-05 CCTCATTT 8 V_ZBTB12_04_M02928 TRANSFAC - 25280358 25280372 2.0E-06 AAACGTTAGAACTTC 15 V_TCF7_04_M02921 TRANSFAC + 25280057 25280071 5.0E-06 CTGTCTTAGAAAATA 15 V_TCF7_04_M02921 TRANSFAC - 25280424 25280438 3.0E-06 AGGAATTAGAAACAA 15 V_TCF1_06_M02815 TRANSFAC - 25281113 25281129 9.0E-06 GTTTGGATAACCAAACA 17 V_FRA1_Q5_M01267 TRANSFAC + 25281227 25281234 1.0E-05 TGAGTCAT 8 V_RSRFC4_01_M00026 TRANSFAC + 25280485 25280500 9.0E-06 TTGCTATTAATATATT 16 V_RSRFC4_01_M00026 TRANSFAC - 25280485 25280500 8.0E-06 AATATATTAATAGCAA 16 V_SOX8_03_M02808 TRANSFAC + 25281105 25281121 1.0E-06 ATTTTTATTGTTTGGTT 17 V_SRF_06_M02916 TRANSFAC + 25280341 25280357 9.0E-06 ATGAGGAAAAAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 25280343 25280359 1.0E-06 GAGGAAAAAAAAAACGA 17 V_SRF_06_M02916 TRANSFAC + 25280344 25280360 1.0E-06 AGGAAAAAAAAAACGAA 17 V_SRF_06_M02916 TRANSFAC + 25280345 25280361 4.0E-06 GGAAAAAAAAAACGAAG 17 V_SRF_06_M02916 TRANSFAC - 25280365 25280381 8.0E-06 ATTTGGAAAAAACGTTA 17 V_SRF_06_M02916 TRANSFAC - 25281097 25281113 4.0E-06 AATAAAAATAAAAGTAT 17 V_SRF_06_M02916 TRANSFAC - 25281098 25281114 2.0E-06 CAATAAAAATAAAAGTA 17 V_NFE2_Q6_M02104 TRANSFAC - 25281220 25281235 9.0E-06 GATGACTCAGTTCTCT 16 V_SATB1_01_M01232 TRANSFAC + 25281077 25281088 2.0E-06 TTTTAGTACTAA 12 V_SATB1_01_M01232 TRANSFAC - 25281079 25281090 2.0E-06 TTTTAGTACTAA 12 V_HOXD8_01_M01432 TRANSFAC - 25280485 25280501 1.0E-06 GAATATATTAATAGCAA 17 V_HOMEZ_01_M01429 TRANSFAC - 25280349 25280365 1.0E-06 AGAACTTCGTTTTTTTT 17 V_FOXO1_01_M00473 TRANSFAC + 25280077 25280086 5.0E-06 AAAAAACAAG 10 V_FOXO1_01_M00473 TRANSFAC - 25280522 25280531 9.0E-06 ACTAAACAAA 10 V_SOX2_Q6_M01272 TRANSFAC + 25280417 25280432 2.0E-06 TATCCCATTGTTTCTA 16 V_NFE2_01_M00037 TRANSFAC + 25281224 25281234 3.0E-06 AACTGAGTCAT 11 V_IRF1_01_M00062 TRANSFAC - 25281099 25281111 6.0E-06 TAAAAATAAAAGT 13 V_SRY_05_M02917 TRANSFAC - 25281106 25281122 2.0E-06 TAACCAAACAATAAAAA 17 V_MEF2_01_M00006 TRANSFAC + 25280061 25280076 2.0E-06 CTTAGAAAATAACCCC 16 V_MEF2A_05_M01301 TRANSFAC + 25280486 25280497 9.0E-06 TGCTATTAATAT 12 V_HMEF2_Q6_M00406 TRANSFAC + 25280061 25280076 8.0E-06 CTTAGAAAATAACCCC 16 V_HOXA10_01_M01464 TRANSFAC - 25281103 25281118 4.0E-06 CAAACAATAAAAATAA 16 V_GATA6_04_M02757 TRANSFAC - 25281139 25281155 1.0E-05 GAACTTGATAAGGGATG 17 V_HOXD10_01_M01375 TRANSFAC - 25281102 25281118 1.0E-06 CAAACAATAAAAATAAA 17 V_TCF11MAFG_01_M00284 TRANSFAC - 25280463 25280484 5.0E-06 CAAGTGTGAGACAGCACGTCAT 22 V_TCF3_05_M02920 TRANSFAC + 25280342 25280356 1.0E-06 TGAGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 25280343 25280357 5.0E-06 GAGGAAAAAAAAAAC 15 V_TCF3_05_M02920 TRANSFAC + 25281268 25281282 0.0E+00 TGGCTAATATAAAAT 15 V_ATATA_B_M00311 TRANSFAC + 25281050 25281059 5.0E-06 GTACTTAAGC 10 V_GLIS2_04_M02863 TRANSFAC - 25281076 25281089 4.0E-06 TTTAGTACTAAAAA 14 V_GLIS2_04_M02863 TRANSFAC - 25281100 25281113 1.0E-05 AATAAAAATAAAAG 14 V_MIF1_01_M00279 TRANSFAC + 25281021 25281038 4.0E-06 TAGTTTCTTAGCCACTGG 18 V_SOX9_Q4_M01284 TRANSFAC - 25280518 25280528 7.0E-06 AAACAAAGAGC 11 V_NANOG_02_M01247 TRANSFAC + 25280077 25280096 4.0E-06 AAAAAACAAGAAAGCAAGTA 20 V_NANOG_02_M01247 TRANSFAC - 25281104 25281123 2.0E-06 ATAACCAAACAATAAAAATA 20 V_GATA1_06_M00347 TRANSFAC + 25280037 25280046 3.0E-06 CTAGATAACA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.