Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GNAO1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2775 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O chr16 + 56220250 - 56225750 56225250 Transcription Factor Binding Sites   Download all TFBS in the GNAO1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 56224709 56224726 4.0E-06 TCAATAAATGTGGACATA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 56224709 56224726 5.0E-06 TATGTCCACATTTATTGA 18 SOX10_HMG_full_dimeric_15_3 SELEX + 56229203 56229217 2.0E-06 ATGAATGGCAGTTTT 15 SOX9_HMG_full_dimeric_17_3 SELEX + 56229202 56229218 2.0E-06 CATGAATGGCAGTTTTC 17 TBX1_TBX_DBD_dimeric_23_1 SELEX + 56228298 56228320 5.0E-06 TTTAAAACTTCAGAAGTCTGTAA 23 HINFP1_C2H2_full_dimeric_20_1 SELEX + 56225243 56225262 5.0E-06 GCGGCCCTGCTGACGTCAGC 20 HNF1B_MA0153.1 JASPAR + 56224238 56224249 5.0E-06 TCAGTATTTGAC 12 HNF1B_MA0153.1 JASPAR - 56224693 56224704 6.0E-06 CTAATATGTGAC 12 EWSR1-FLI1_MA0149.1 JASPAR + 56228596 56228613 6.0E-06 GGAGGGGAAGGAGGAGGG 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 56224191 56224204 5.0E-06 GACCACCCAGAACA 14 SOX7_HMG_full_dimeric_17_2 SELEX + 56229202 56229218 5.0E-06 CATGAATGGCAGTTTTC 17 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 56225251 56225262 2.0E-06 GCTGACGTCAGC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 56225251 56225262 2.0E-06 GCTGACGTCAGC 12 Pax4_MA0068.1 JASPAR - 56228548 56228577 7.0E-06 GAGTATTTCCGAATGCTTTCGACCCCCTCC 30 ZNF524_C2H2_full_dimeric_12_1 SELEX + 56227101 56227112 9.0E-06 CCCCTCGCACCC 12 TCF7L1_HMG_full_monomeric_12_1 SELEX + 56226210 56226221 4.0E-06 AAACCTCAAAGA 12 SOX8_HMG_full_dimeric_13_1 SELEX + 56229203 56229215 2.0E-06 ATGAATGGCAGTT 13 Sox17_HMG_DBD_dimeric_15_2 SELEX + 56229203 56229217 6.0E-06 ATGAATGGCAGTTTT 15 Sox17_HMG_DBD_dimeric_15_2 SELEX - 56229203 56229217 8.0E-06 AAAACTGCCATTCAT 15 SP1_MA0079.2 JASPAR + 56225069 56225078 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 56225131 56225140 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 56226422 56226431 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 56226678 56226687 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 56228578 56228587 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 56228605 56228614 9.0E-06 CCCCTCCTCC 10 RFX3_RFX_DBD_dimeric_15_1 SELEX - 56229324 56229338 7.0E-06 TGTTACTAGGATACA 15 CREB3_bZIP_full_dimeric_14_1 SELEX - 56225250 56225263 7.0E-06 AGCTGACGTCAGCA 14 SOX14_HMG_DBD_dimeric_15_1 SELEX + 56229203 56229217 8.0E-06 ATGAATGGCAGTTTT 15 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 56224115 56224127 6.0E-06 AGCCCCTGGGGCT 13 RFX4_RFX_DBD_dimeric_15_1 SELEX - 56229324 56229338 3.0E-06 TGTTACTAGGATACA 15 SOX18_HMG_full_dimeric_15_3 SELEX - 56229203 56229217 1.0E-06 AAAACTGCCATTCAT 15 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 56225248 56225265 1.0E-06 CCTGCTGACGTCAGCTGG 18 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 56225248 56225265 1.0E-06 CCAGCTGACGTCAGCAGG 18 RUNX1_MA0002.2 JASPAR + 56227084 56227094 2.0E-06 GGCTGTGGTTT 11 TP53_MA0106.1 JASPAR - 56228662 56228681 5.0E-06 TGGGGCATGTTCAGGAAAAG 20 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 56225250 56225263 2.0E-06 TGCTGACGTCAGCT 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 56225250 56225263 2.0E-06 AGCTGACGTCAGCA 14 Sox1_HMG_DBD_dimeric_15_2 SELEX + 56229203 56229217 7.0E-06 ATGAATGGCAGTTTT 15 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 56229286 56229297 8.0E-06 TAACAAAACAAG 12 V_FOXP1_01_M00987 TRANSFAC + 56225804 56225823 7.0E-06 TTATTTATTTTGGGTCGTGC 20 V_KLF15_Q2_M01714 TRANSFAC - 56226678 56226691 7.0E-06 GAGTGGGGGAGGGG 14 V_ZSCAN4_03_M02838 TRANSFAC + 56226631 56226647 8.0E-06 AATTCGTGCACACACAC 17 V_AML_Q6_M00769 TRANSFAC + 56227082 56227096 4.0E-06 GAGGCTGTGGTTTCT 15 V_CDX2_Q5_01_M01659 TRANSFAC + 56224709 56224719 7.0E-06 TCAATAAATGT 11 V_APOLYA_B_M00310 TRANSFAC - 56224166 56224180 9.0E-06 AAGAAACGACTTTTT 15 V_MAFK_03_M02776 TRANSFAC - 56228624 56228638 2.0E-06 TTAATTTGCAGACTC 15 V_DMRT3_01_M01148 TRANSFAC - 56229328 56229342 9.0E-06 AATTTGTTACTAGGA 15 V_CEBP_Q3_M00770 TRANSFAC + 56224211 56224222 8.0E-06 ATCTTTGGCAAA 12 V_ZEC_01_M01081 TRANSFAC - 56228166 56228178 3.0E-06 CAATTTGGGTTGC 13 V_NKX29_01_M01352 TRANSFAC - 56224698 56224714 9.0E-06 TATTGAGCACCTAATAT 17 V_DEAF1_01_M01001 TRANSFAC - 56228561 56228585 0.0E+00 CCTCCCCCGAGTATTTCCGAATGCT 25 V_CREB_Q4_M00178 TRANSFAC + 56225251 56225262 5.0E-06 GCTGACGTCAGC 12 V_CREB_Q4_M00178 TRANSFAC - 56225251 56225262 5.0E-06 GCTGACGTCAGC 12 V_EBOX_Q6_01_M01034 TRANSFAC + 56224946 56224955 4.0E-06 CCACCTGACC 10 V_MAFB_03_M02879 TRANSFAC + 56227945 56227959 7.0E-06 AAGATGCAAAAAATC 15 V_CREB_Q4_01_M00917 TRANSFAC - 56225253 56225263 5.0E-06 AGCTGACGTCA 11 V_SRY_02_M00160 TRANSFAC - 56229288 56229299 5.0E-06 GTTAACAAAACA 12 V_GLI1_Q2_M01042 TRANSFAC + 56224191 56224200 3.0E-06 GACCACCCAG 10 V_P53_DECAMER_Q2_M00761 TRANSFAC - 56229283 56229292 7.0E-06 AAACAAGTCC 10 V_HNF3_Q6_01_M01012 TRANSFAC + 56225800 56225817 0.0E+00 TATTTTATTTATTTTGGG 18 V_SP1_03_M02281 TRANSFAC + 56225069 56225078 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 56225131 56225140 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 56226422 56226431 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 56226678 56226687 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 56228578 56228587 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 56228605 56228614 9.0E-06 CCCCTCCTCC 10 V_SP1_02_M01303 TRANSFAC + 56225017 56225027 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC - 56225067 56225077 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 56225324 56225334 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC + 56226075 56226085 5.0E-06 GGGGTGGGGGG 11 V_AIRE_02_M01000 TRANSFAC - 56228666 56228690 6.0E-06 CCTAATTTATGGGGCATGTTCAGGA 25 V_TCFAP2E_04_M02926 TRANSFAC - 56225372 56225385 7.0E-06 GAGGGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 56229339 56229352 3.0E-06 GACTCAAAAAAATT 14 V_LDSPOLYA_B_M00317 TRANSFAC + 56226619 56226634 2.0E-06 GGCCTGTTTTTTAATT 16 V_WT1_Q6_01_M02036 TRANSFAC - 56225019 56225028 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC + 56225072 56225081 4.0E-06 CGCCCCCGCC 10 V_ZNF219_01_M01122 TRANSFAC - 56226076 56226087 2.0E-06 CGCCCCCCACCC 12 V_ZIC3_01_M00450 TRANSFAC - 56224191 56224199 6.0E-06 TGGGTGGTC 9 V_RUNX1_01_M02257 TRANSFAC + 56227084 56227094 2.0E-06 GGCTGTGGTTT 11 V_SOX8_04_M02912 TRANSFAC + 56229197 56229210 4.0E-06 GCATTCATGAATGG 14 V_SOX8_04_M02912 TRANSFAC - 56229197 56229210 8.0E-06 CCATTCATGAATGC 14 V_E2F1_01_M01250 TRANSFAC + 56224173 56224180 1.0E-05 CGTTTCTT 8 V_HIC1_03_M01073 TRANSFAC - 56224956 56224973 6.0E-06 CCGGGCTGCCCGCAGGAC 18 V_RFX1_01_M00280 TRANSFAC + 56229323 56229339 6.0E-06 CTGTATCCTAGTAACAA 17 V_KROX_Q6_M00982 TRANSFAC - 56225017 56225030 0.0E+00 TCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 56225023 56225036 2.0E-06 CCCGCCTCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 56225070 56225083 6.0E-06 CCCGCCCCCGCCAG 14 V_ZBP89_Q4_M01816 TRANSFAC + 56226679 56226688 4.0E-06 CCCTCCCCCA 10 V_IRX4_01_M01410 TRANSFAC - 56228044 56228060 9.0E-06 TAAGAACATGTCAAGCA 17 V_SP1_Q6_M00196 TRANSFAC + 56228182 56228194 8.0E-06 GGGAGGCGGGGCC 13 V_HNF1B_04_M02266 TRANSFAC + 56224238 56224249 5.0E-06 TCAGTATTTGAC 12 V_HNF1B_04_M02266 TRANSFAC - 56224693 56224704 6.0E-06 CTAATATGTGAC 12 V_MAZ_Q6_01_M02023 TRANSFAC - 56225065 56225078 1.0E-05 GGGGGCGGGGAGTG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 56225380 56225393 1.0E-05 CAGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 56226418 56226431 0.0E+00 GGGGGAGGGGGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC + 56228578 56228591 0.0E+00 GGGGGAGGGGAGTG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 56228602 56228615 9.0E-06 GAAGGAGGAGGGGG 14 V_EGR1_Q6_M01873 TRANSFAC - 56225071 56225080 4.0E-06 GCGGGGGCGG 10 V_CDX2_Q5_M00729 TRANSFAC - 56224141 56224154 6.0E-06 ATAGTTTTACAATC 14 V_SP1SP3_Q4_M01219 TRANSFAC + 56225674 56225684 5.0E-06 CCGCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 56228605 56228615 1.0E-05 CCCCCTCCTCC 11 V_ZIC1_01_M00448 TRANSFAC - 56224191 56224199 6.0E-06 TGGGTGGTC 9 V_CREB_Q2_01_M00916 TRANSFAC - 56225249 56225262 3.0E-06 GCTGACGTCAGCAG 14 V_CREB_Q2_01_M00916 TRANSFAC + 56225251 56225264 3.0E-06 GCTGACGTCAGCTG 14 V_SP1_01_M00008 TRANSFAC + 56225029 56225038 7.0E-06 GAGGCGGGGT 10 V_MZF1_02_M00084 TRANSFAC - 56225377 56225389 8.0E-06 GAGGGAGGGGAAA 13 V_ZFP691_04_M02937 TRANSFAC + 56226669 56226685 4.0E-06 TATTTGACTCCCCTCCC 17 V_GLI3_01_M01596 TRANSFAC - 56224190 56224200 0.0E+00 CTGGGTGGTCT 11 V_SP4_Q5_M01273 TRANSFAC + 56225068 56225078 9.0E-06 TCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 56225131 56225141 5.0E-06 GCCCCTCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 56225204 56225214 7.0E-06 CCCCCGCCCCG 11 V_CREM_Q6_M01820 TRANSFAC - 56225250 56225260 0.0E+00 TGACGTCAGCA 11 V_CREM_Q6_M01820 TRANSFAC + 56225253 56225263 1.0E-05 TGACGTCAGCT 11 V_CIZ_01_M00734 TRANSFAC + 56227951 56227959 4.0E-06 CAAAAAATC 9 V_POU5F1_01_M01307 TRANSFAC + 56227947 56227956 6.0E-06 GATGCAAAAA 10 V_E2F6_01_M01252 TRANSFAC + 56224173 56224180 1.0E-05 CGTTTCTT 8 V_ATF2_Q5_M01862 TRANSFAC - 56225252 56225263 5.0E-06 AGCTGACGTCAG 12 V_TCF7_04_M02921 TRANSFAC - 56226623 56226637 6.0E-06 ACGAATTAAAAAACA 15 V_TCF1_06_M02815 TRANSFAC - 56229288 56229304 9.0E-06 TTGTGGTTAACAAAACA 17 V_TCF1_06_M02815 TRANSFAC + 56229289 56229305 7.0E-06 GTTTTGTTAACCACAAA 17 V_FPM315_01_M01587 TRANSFAC - 56225319 56225330 6.0E-06 CGGGGAGGAGGC 12 V_FPM315_01_M01587 TRANSFAC + 56228602 56228613 4.0E-06 GAAGGAGGAGGG 12 V_ZFP281_01_M01597 TRANSFAC + 56225130 56225140 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 56226073 56226083 4.0E-06 GGGGGGTGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 56226422 56226432 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 56226678 56226688 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 56228577 56228587 7.0E-06 CGGGGGAGGGG 11 V_SRF_06_M02916 TRANSFAC - 56225365 56225381 6.0E-06 GGAAAAAAAAAATGGGA 17 V_SRF_06_M02916 TRANSFAC - 56225367 56225383 3.0E-06 GGGGAAAAAAAAAATGG 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 56228596 56228613 6.0E-06 GGAGGGGAAGGAGGAGGG 18 V_FOXJ2_01_M00422 TRANSFAC - 56225800 56225817 0.0E+00 CCCAAAATAAATAAAATA 18 V_ZIC3_04_M02837 TRANSFAC - 56225095 56225109 4.0E-06 CTCCCCCGGGGTGGG 15 V_ZIC1_04_M02835 TRANSFAC - 56225096 56225109 3.0E-06 CTCCCCCGGGGTGG 14 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 56227087 56227094 1.0E-05 TGTGGTTT 8 V_HOMEZ_01_M01429 TRANSFAC - 56224143 56224159 5.0E-06 ACAAAATAGTTTTACAA 17 V_RFX3_04_M02788 TRANSFAC + 56229322 56229344 3.0E-06 ACTGTATCCTAGTAACAAATTTT 23 V_GLI_Q2_M01037 TRANSFAC - 56224190 56224201 1.0E-06 TCTGGGTGGTCT 12 V_SP1_Q2_01_M00933 TRANSFAC + 56225069 56225078 4.0E-06 CCCCGCCCCC 10 V_AP2ALPHA_02_M01045 TRANSFAC - 56224115 56224129 5.0E-06 ACAGCCCCAGGGGCT 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 56225068 56225081 5.0E-06 GGCGGGGGCGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 56225198 56225211 2.0E-06 GGCGGGGGAGGCGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 56226677 56226690 2.0E-06 AGTGGGGGAGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 56228575 56228588 9.0E-06 CTCGGGGGAGGGGA 14 V_TCF3_05_M02920 TRANSFAC - 56225369 56225383 0.0E+00 GGGGAAAAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC - 56225370 56225384 0.0E+00 AGGGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 56225805 56225819 2.0E-06 GACCCAAAATAAATA 15 V_ZIC2_04_M02836 TRANSFAC - 56225094 56225108 5.0E-06 TCCCCCGGGGTGGGT 15 V_ZIC2_04_M02836 TRANSFAC - 56225095 56225109 8.0E-06 CTCCCCCGGGGTGGG 15 V_ZIC2_01_M00449 TRANSFAC - 56224191 56224199 6.0E-06 TGGGTGGTC 9 V_NF1_Q6_M00193 TRANSFAC + 56224213 56224230 8.0E-06 CTTTGGCAAATATCGACT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.