Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GNA11 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2767 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) chr19 + 3089407 - 3094907 3094407 Transcription Factor Binding Sites   Download all TFBS in the GNA11 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints IRF7_IRF_DBD_dimeric_14_1 SELEX - 3099074 3099087 2.0E-06 CAGAAAGTGAAACC 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 3093917 3093933 2.0E-06 CCATTAAAAAGCGTTAA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 3096020 3096030 1.0E-05 GCCCCGCCCCC 11 NHLH1_MA0048.1 JASPAR + 3094728 3094739 5.0E-06 AAGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR - 3094728 3094739 2.0E-06 CCGCAGCTGCTT 12 SRF_MADS_DBD_dimeric_12_1 SELEX - 3095927 3095938 9.0E-06 CCCTTATTTGGA 12 IRF8_IRF_full_dimeric_14_1 SELEX - 3099074 3099087 2.0E-06 CAGAAAGTGAAACC 14 FOXO3_MA0157.1 JASPAR - 3098890 3098897 7.0E-06 TGTAAACA 8 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 3095638 3095649 3.0E-06 CTTTTTCCCACA 12 HINFP1_C2H2_full_dimeric_20_1 SELEX - 3094433 3094452 7.0E-06 GCGGACTCCCGCGCGGCCGC 20 RUNX3_RUNX_DBD_dimeric_16_1 SELEX - 3094393 3094408 4.0E-06 CCACCGCCAACCGCAG 16 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 3098531 3098541 8.0E-06 AGCCTCAGGCC 11 Pax4_MA0068.1 JASPAR + 3089551 3089580 2.0E-06 CAAAAAAAAAAAGTGAGCTAATCTTCCCAC 30 SRF_MA0083.1 JASPAR - 3095928 3095939 1.0E-06 GCCCTTATTTGG 12 IRF1_MA0050.1 JASPAR - 3099074 3099085 0.0E+00 GAAAGTGAAACC 12 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 3093914 3093929 8.0E-06 TAAAAAGCGTTAATGG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 3093917 3093932 9.0E-06 TTAACGCTTTTTAATG 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 3094384 3094401 1.0E-05 CAACCGCAGCCGCCGCAA 18 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 3096125 3096136 2.0E-06 GTTCCCCACACA 12 SP1_MA0079.2 JASPAR - 3096020 3096029 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 3096070 3096079 9.0E-06 CCCCTCCTCC 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 3093924 3093933 8.0E-06 CCATTAAAAA 10 IRF9_IRF_full_trimeric_15_1 SELEX - 3099074 3099088 3.0E-06 TCAGAAAGTGAAACC 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 3096126 3096136 1.0E-06 GTTCCCCACAC 11 IRF4_IRF_full_dimeric_15_1 SELEX - 3099073 3099087 6.0E-06 CAGAAAGTGAAACCT 15 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 3096123 3096136 0.0E+00 GTTCCCCACACAAC 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 3096125 3096136 1.0E-06 GTTCCCCACACA 12 NHLH1_bHLH_full_dimeric_10_1 SELEX + 3094729 3094738 5.0E-06 AGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 3094729 3094738 4.0E-06 CGCAGCTGCT 10 TBX1_TBX_DBD_dimeric_20_1 SELEX + 3096809 3096828 8.0E-06 AGATGTGAGCTCACGTGCGA 20 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 3094384 3094401 8.0E-06 CAACCGCAGCCGCCGCAA 18 V_SRF_Q6_M00186 TRANSFAC + 3095926 3095939 1.0E-06 CTCCAAATAAGGGC 14 V_AP2ALPHA_Q6_M01857 TRANSFAC - 3096016 3096026 6.0E-06 CGCCCCCGGCC 11 V_FREAC7_01_M00293 TRANSFAC - 3098886 3098901 7.0E-06 TACATGTAAACACAAA 16 V_FOXO3_02_M02270 TRANSFAC - 3098890 3098897 7.0E-06 TGTAAACA 8 V_BTEB3_Q5_M01865 TRANSFAC - 3089570 3089582 9.0E-06 GTGTGGGAAGATT 13 V_FOXA2_04_M02749 TRANSFAC - 3098885 3098901 2.0E-06 TACATGTAAACACAAAG 17 V_HMGIY_Q3_M01010 TRANSFAC - 3089550 3089564 7.0E-06 ACTTTTTTTTTTTGA 15 V_ETS_B_M00340 TRANSFAC + 3099037 3099050 2.0E-06 TGGAGGAAGTGCTT 14 V_MMEF2_Q6_M00405 TRANSFAC + 3098573 3098588 9.0E-06 CTTTCTAAATAAAGCA 16 V_SP1_Q6_01_M00931 TRANSFAC - 3095976 3095985 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 3096021 3096030 4.0E-06 GGGGCGGGGC 10 V_IRF_Q6_01_M00972 TRANSFAC - 3099075 3099085 1.0E-06 GAAAGTGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 3099072 3099087 2.0E-06 CAGAAAGTGAAACCTC 16 V_FOXJ1_03_M02750 TRANSFAC - 3098884 3098899 3.0E-06 CATGTAAACACAAAGG 16 V_SP1_03_M02281 TRANSFAC - 3096020 3096029 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 3096070 3096079 9.0E-06 CCCCTCCTCC 10 V_TCFAP2E_04_M02926 TRANSFAC + 3089547 3089560 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 3089549 3089562 2.0E-06 CTCAAAAAAAAAAA 14 V_BARBIE_01_M00238 TRANSFAC + 3098579 3098593 1.0E-06 AAATAAAGCAGGATG 15 V_PAX5_02_M00144 TRANSFAC + 3094691 3094718 0.0E+00 GGTGAAGGAGTCCAAGCGGATCAACGCC 28 V_SRF_C_M00215 TRANSFAC + 3095927 3095941 8.0E-06 TCCAAATAAGGGCCC 15 V_ETS_Q4_M00771 TRANSFAC - 3099039 3099050 3.0E-06 AAGCACTTCCTC 12 V_ELF4_04_M02850 TRANSFAC + 3089548 3089564 0.0E+00 TCTCAAAAAAAAAAAGT 17 V_ELF4_04_M02850 TRANSFAC + 3089550 3089566 7.0E-06 TCAAAAAAAAAAAGTGA 17 V_GC_01_M00255 TRANSFAC - 3094225 3094238 1.0E-06 AAGGGGCGGGGCGG 14 V_GC_01_M00255 TRANSFAC - 3094303 3094316 7.0E-06 AATGGGAGGGGCCG 14 V_ZFP105_03_M02827 TRANSFAC + 3089549 3089563 1.0E-06 CTCAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 3089551 3089565 4.0E-06 CAAAAAAAAAAAGTG 15 V_TEF_Q6_M00672 TRANSFAC - 3098887 3098898 3.0E-06 ATGTAAACACAA 12 V_NKX61_01_M00424 TRANSFAC + 3093924 3093936 2.0E-06 TTTTTAATGGATG 13 V_SP4_03_M02810 TRANSFAC - 3096071 3096087 3.0E-06 CAGCACGCCCCCTCCTC 17 V_KROX_Q6_M00982 TRANSFAC + 3094213 3094226 3.0E-06 CCCGCCCTCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 3096015 3096028 5.0E-06 CCCGCCCCCGGCCC 14 V_IRX4_01_M01410 TRANSFAC - 3098889 3098905 2.0E-06 TGATTACATGTAAACAC 17 V_IRX4_01_M01410 TRANSFAC + 3098890 3098906 3.0E-06 TGTTTACATGTAATCAG 17 V_SP1_Q6_M00196 TRANSFAC - 3094221 3094233 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 3094226 3094238 1.0E-06 AAGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 3094270 3094282 9.0E-06 TGGGGGCGGGACT 13 V_SP1_Q6_M00196 TRANSFAC + 3096019 3096031 2.0E-06 CGGGGGCGGGGCG 13 V_HNF3A_01_M01261 TRANSFAC - 3098889 3098898 4.0E-06 ATGTAAACAC 10 V_MAZ_Q6_01_M02023 TRANSFAC + 3096067 3096080 9.0E-06 GACGGAGGAGGGGG 14 V_ZF5_B_M00333 TRANSFAC + 3094284 3094296 5.0E-06 GGTGGGCGCGCTT 13 V_ISRE_01_M00258 TRANSFAC + 3099073 3099087 2.0E-06 AGGTTTCACTTTCTG 15 V_SP1SP3_Q4_M01219 TRANSFAC - 3096070 3096080 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 3096073 3096083 7.0E-06 ACGCCCCCTCC 11 V_PPARG_03_M00528 TRANSFAC + 3096555 3096571 1.0E-06 TTCAAGGACGAAGGTCA 17 V_TAL1BETAE47_01_M00065 TRANSFAC + 3096444 3096459 7.0E-06 CTTACCAGATGGCCTT 16 V_KLF7_03_M02773 TRANSFAC + 3094224 3094239 8.0E-06 CCCGCCCCGCCCCTTT 16 V_MEF2_Q6_01_M00941 TRANSFAC - 3098577 3098588 3.0E-06 TGCTTTATTTAG 12 V_SRF_Q5_02_M01007 TRANSFAC - 3095924 3095942 8.0E-06 GGGGCCCTTATTTGGAGTG 19 V_STAF_02_M00264 TRANSFAC + 3094128 3094148 5.0E-06 CATTCCCACAATCCCGGGCGG 21 V_IRX3_01_M01318 TRANSFAC - 3098889 3098905 3.0E-06 TGATTACATGTAAACAC 17 V_IRX3_01_M01318 TRANSFAC + 3098890 3098906 1.0E-06 TGTTTACATGTAATCAG 17 V_SRF_03_M01304 TRANSFAC + 3095926 3095938 1.0E-06 CTCCAAATAAGGG 13 V_IRX5_01_M01472 TRANSFAC - 3098889 3098905 8.0E-06 TGATTACATGTAAACAC 17 V_IRX5_01_M01472 TRANSFAC + 3098890 3098906 8.0E-06 TGTTTACATGTAATCAG 17 V_TAL1BETAITF2_01_M00070 TRANSFAC + 3096444 3096459 2.0E-06 CTTACCAGATGGCCTT 16 V_SP4_Q5_M01273 TRANSFAC + 3095976 3095986 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 3096020 3096030 1.0E-06 GCCCCGCCCCC 11 V_FREAC2_01_M00290 TRANSFAC - 3098886 3098901 3.0E-06 TACATGTAAACACAAA 16 V_IRX3_02_M01485 TRANSFAC - 3098889 3098905 4.0E-06 TGATTACATGTAAACAC 17 V_IRX3_02_M01485 TRANSFAC + 3098890 3098906 2.0E-06 TGTTTACATGTAATCAG 17 V_FOXL1_04_M02753 TRANSFAC - 3098885 3098901 5.0E-06 TACATGTAAACACAAAG 17 V_EBNA1_01_M01745 TRANSFAC + 3093978 3093993 6.0E-06 GGCAGCGACTGCTGCC 16 V_NRF2_Q4_M00821 TRANSFAC - 3094649 3094661 8.0E-06 CTCCAGAGTCATC 13 V_SRF_01_M00152 TRANSFAC - 3095924 3095941 7.0E-06 GGGCCCTTATTTGGAGTG 18 V_ETS1_B_M00339 TRANSFAC + 3099038 3099052 1.0E-06 GGAGGAAGTGCTTTC 15 V_IRX2_01_M01405 TRANSFAC - 3098889 3098905 6.0E-06 TGATTACATGTAAACAC 17 V_IRX2_01_M01405 TRANSFAC + 3098890 3098906 1.0E-05 TGTTTACATGTAATCAG 17 V_HSF_Q6_M00641 TRANSFAC + 3098599 3098611 2.0E-06 TTCCGGAGGCTTC 13 V_IRF1_Q6_01_M01881 TRANSFAC + 3099073 3099086 0.0E+00 AGGTTTCACTTTCT 14 V_SRF_06_M02916 TRANSFAC + 3089547 3089563 1.0E-05 GTCTCAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 3089548 3089564 1.0E-06 TCTCAAAAAAAAAAAGT 17 V_SRF_06_M02916 TRANSFAC + 3089549 3089565 1.0E-06 CTCAAAAAAAAAAAGTG 17 V_SRF_06_M02916 TRANSFAC + 3089550 3089566 1.0E-06 TCAAAAAAAAAAAGTGA 17 V_HIF2A_01_M01249 TRANSFAC - 3098245 3098254 1.0E-06 GTACGTGCTT 10 V_SP1_Q2_01_M00933 TRANSFAC + 3094228 3094237 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 3095977 3095986 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 3096020 3096029 4.0E-06 CCCCGCCCCC 10 V_HNF4_01_M00134 TRANSFAC + 3096556 3096574 7.0E-06 TCAAGGACGAAGGTCAGGG 19 V_NFYA_Q5_M02106 TRANSFAC - 3094308 3094321 3.0E-06 CGGCCAATGGGAGG 14 V_SP1_Q4_01_M00932 TRANSFAC - 3094226 3094238 1.0E-06 AAGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 3094304 3094316 6.0E-06 AATGGGAGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 3096019 3096031 3.0E-06 CGGGGGCGGGGCG 13 V_IRXB3_01_M01377 TRANSFAC - 3098889 3098905 3.0E-06 TGATTACATGTAAACAC 17 V_IRXB3_01_M01377 TRANSFAC + 3098890 3098906 5.0E-06 TGTTTACATGTAATCAG 17 V_TCF3_05_M02920 TRANSFAC + 3089548 3089562 4.0E-06 TCTCAAAAAAAAAAA 15 V_FOXK1_03_M02752 TRANSFAC - 3098885 3098901 1.0E-06 TACATGTAAACACAAAG 17 V_PAX4_04_M00380 TRANSFAC + 3089556 3089585 1.0E-06 AAAAAAAGTGAGCTAATCTTCCCACACACC 30 V_SMAD1_01_M01590 TRANSFAC - 3098883 3098894 1.0E-06 AAACACAAAGGA 12 V_SOX9_Q4_M01284 TRANSFAC - 3098882 3098892 7.0E-06 ACACAAAGGAC 11 V_PAX6_01_M00097 TRANSFAC + 3093923 3093943 5.0E-06 CTTTTTAATGGATGAGTGAAG 21 V_PAX6_01_M00097 TRANSFAC - 3093926 3093946 7.0E-06 AACCTTCACTCATCCATTAAA 21 V_HSF1_Q6_01_M02017 TRANSFAC - 3098766 3098779 6.0E-06 GAGTCTTCTGGGAC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.