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APOBEC3C


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
27350 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C chr22 +39405264 - 39410764 39410264

Transcription Factor Binding Sites

 
Download all TFBS in the APOBEC3C promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 39410245 39410262 9.0E-06 CAAGGCCCTGGGAGGTCA 18
Mafb_bZIP_DBD_monomeric_12_1 SELEX - 39409061 39409072 3.0E-06 AAAACGCTGACG 12
TCF7L1_HMG_full_monomeric_12_1 SELEX + 39409091 39409102 0.0E+00 AAAGATCAAAGA 12
LEF1_HMG_DBD_monomeric_15_1 SELEX + 39409091 39409105 0.0E+00 AAAGATCAAAGACTT 15
RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 39411077 39411093 9.0E-06 CGGGTCACTTGTGGTCA 17
Tcf7_HMG_DBD_monomeric_12_1 SELEX + 39409091 39409102 0.0E+00 AAAGATCAAAGA 12
RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 39410246 39410262 7.0E-06 AAGGCCCTGGGAGGTCA 17
Gata1_MA0035.2 JASPAR + 39410086 39410096 3.0E-06 ACAGATAAAGA 11
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 39410031 39410045 8.0E-06 AGAAAGAGAAAGGCA 15
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 39410037 39410051 9.0E-06 AGAAAGAGAAAGAGA 15
Pou5f1_MA0142.1 JASPAR + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
GLI2_C2H2_DBD_monomeric_12_1 SELEX - 39410546 39410557 9.0E-06 GGGACCACACAG 12
IRF3_IRF_full_trimeric_21_1 SELEX - 39410038 39410058 7.0E-06 AAAGAAGAGAAAGAGAAAGAG 21
Sox2_MA0143.1 JASPAR + 39413785 39413799 0.0E+00 CCATTGTCATGCAGA 15
V_LEF1_04_M02774 TRANSFAC - 39409090 39409106 0.0E+00 AAAGTCTTTGATCTTTC 17
V_ATF_01_M00017 TRANSFAC - 39409055 39409068 3.0E-06 CGCTGACGTATACT 14
V_ETS_B_M00340 TRANSFAC - 39413801 39413814 5.0E-06 GAGAGGAAGCACCT 14
V_GATA3_03_M00351 TRANSFAC + 39409091 39409100 2.0E-06 AAAGATCAAA 10
V_STAT_Q6_M00777 TRANSFAC - 39409310 39409322 6.0E-06 CCCTTTTCTTGGA 13
V_STAT_Q6_M00777 TRANSFAC - 39410848 39410860 7.0E-06 TTATTTTCTGGTA 13
V_POU5F1_02_M02245 TRANSFAC + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
V_IK_Q5_M01169 TRANSFAC + 39411058 39411067 3.0E-06 TTTGGGAGGC 10
V_EGR_Q6_M00807 TRANSFAC - 39410512 39410522 6.0E-06 GTGGGGGCAGC 11
V_IRF_Q6_01_M00972 TRANSFAC - 39410034 39410044 3.0E-06 GAAAGAGAAAG 11
V_IRF_Q6_01_M00972 TRANSFAC - 39410040 39410050 3.0E-06 GAAAGAGAAAG 11
V_IRF_Q6_01_M00972 TRANSFAC - 39410046 39410056 1.0E-05 AGAAGAGAAAG 11
V_IRF2_Q6_M01882 TRANSFAC - 39410031 39410046 1.0E-06 GAGAAAGAGAAAGGCA 16
V_IRF2_Q6_M01882 TRANSFAC - 39410037 39410052 1.0E-06 GAGAAAGAGAAAGAGA 16
V_IRF2_Q6_M01882 TRANSFAC - 39410043 39410058 8.0E-06 AAAGAAGAGAAAGAGA 16
V_LYF1_01_M00141 TRANSFAC + 39411058 39411066 9.0E-06 TTTGGGAGG 9
V_CDX_Q5_M00991 TRANSFAC - 39409104 39409121 1.0E-06 AATAGTGAAAGTCTTAAA 18
V_TAL1_GATA1_01_M02243 TRANSFAC + 39410077 39410094 2.0E-06 CTGCCCAGGACAGATAAA 18
V_RPC155_01_M01798 TRANSFAC + 39411091 39411106 0.0E+00 TCAGGAGTTTGAGACC 16
V_ETS_Q4_M00771 TRANSFAC + 39410419 39410430 2.0E-06 TGCCACTTCCTG 12
V_CP2_02_M00947 TRANSFAC - 39410144 39410158 7.0E-06 TCTGGTTTTCTCCGG 15
V_TCF3_04_M02816 TRANSFAC + 39409090 39409106 1.0E-06 GAAAGATCAAAGACTTT 17
V_ZBP89_Q4_M01816 TRANSFAC - 39410827 39410836 4.0E-06 CCCTCCCCCA 10
V_CEBPB_02_M00117 TRANSFAC - 39410736 39410749 9.0E-06 TGATTGCTCAAATC 14
V_MAZ_Q6_01_M02023 TRANSFAC + 39410828 39410841 6.0E-06 GGGGGAGGGAATGG 14
V_IRF_Q6_M00772 TRANSFAC + 39410036 39410050 1.0E-06 TTCTCTTTCTCTTTC 15
V_IRF_Q6_M00772 TRANSFAC + 39410042 39410056 2.0E-06 TTCTCTTTCTCTTCT 15
V_LXR_DR4_Q3_M00766 TRANSFAC - 39411078 39411093 5.0E-06 TGACCACAAGTGACCC 16
V_IRF3_06_M02871 TRANSFAC + 39413795 39413808 5.0E-06 GCAGAAAGGTGCTT 14
Tal1_Gata1_MA0140.1 JASPAR + 39410077 39410094 2.0E-06 CTGCCCAGGACAGATAAA 18
V_TEL2_Q6_M00678 TRANSFAC + 39410421 39410430 6.0E-06 CCACTTCCTG 10
V_GATA1_09_M02254 TRANSFAC + 39410086 39410096 3.0E-06 ACAGATAAAGA 11
V_TCF7_03_M02817 TRANSFAC + 39409090 39409106 1.0E-06 GAAAGATCAAAGACTTT 17
V_CREB_Q2_01_M00916 TRANSFAC + 39409056 39409069 7.0E-06 GTATACGTCAGCGT 14
V_OCT4_02_M01124 TRANSFAC + 39413787 39413801 0.0E+00 ATTGTCATGCAGAAA 15
V_ELK1_01_M00007 TRANSFAC - 39413801 39413816 4.0E-06 AAGAGAGGAAGCACCT 16
V_GLI3_01_M01596 TRANSFAC + 39410546 39410556 7.0E-06 CTGTGTGGTCC 11
V_ZIC2_05_M02940 TRANSFAC - 39410539 39410553 2.0E-06 CCACACAGCAGGGCA 15
V_TTF1_Q5_M02034 TRANSFAC + 39408658 39408671 2.0E-06 AACCCCTTGAGAGG 14
V_MAZR_01_M00491 TRANSFAC + 39410225 39410237 2.0E-06 TGGGGAGGGGCCA 13
V_AP1FJ_Q2_M00172 TRANSFAC - 39410856 39410866 6.0E-06 AGTGACTTATT 11
V_T3RBETA_Q6_01_M02119 TRANSFAC + 39411078 39411094 8.0E-06 GGGTCACTTGTGGTCAG 17
V_ETS1_B_M00339 TRANSFAC - 39410417 39410431 4.0E-06 GCAGGAAGTGGCAGG 15
V_ZFP281_01_M01597 TRANSFAC + 39410827 39410837 9.0E-06 TGGGGGAGGGA 11
V_IRF1_Q6_01_M01881 TRANSFAC + 39410038 39410051 2.0E-06 CTCTTTCTCTTTCT 14
V_SOX2_01_M02246 TRANSFAC + 39413785 39413799 0.0E+00 CCATTGTCATGCAGA 15
V_EKLF_Q5_M01874 TRANSFAC - 39410820 39410829 5.0E-06 CCACACCCTC 10
V_SOX2_Q6_M01272 TRANSFAC + 39413781 39413796 3.0E-06 AGACCCATTGTCATGC 16
V_UF1H3BETA_Q6_M01068 TRANSFAC - 39410470 39410483 3.0E-06 GGTGGGGCTGGGGC 14
V_UF1H3BETA_Q6_M01068 TRANSFAC + 39410825 39410838 8.0E-06 TGTGGGGGAGGGAA 14
V_PAX4_04_M00380 TRANSFAC - 39410731 39410760 4.0E-06 AACAAAATGCCTGATTGCTCAAATCATCCT 30
V_SMAD1_01_M01590 TRANSFAC - 39410032 39410043 8.0E-06 AAAGAGAAAGGC 12
V_ZIC1_05_M02939 TRANSFAC - 39410539 39410553 1.0E-06 CCACACAGCAGGGCA 15
V_OCT4_01_M01125 TRANSFAC + 39413786 39413800 0.0E+00 CATTGTCATGCAGAA 15
V_HSF1_Q6_01_M02017 TRANSFAC - 39410847 39410860 9.0E-06 TTATTTTCTGGTAC 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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