Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

POLL Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27343 polymerase (DNA directed), lambda chr10 - 103347527 - 103353027 103348027 Transcription Factor Binding Sites   Download all TFBS in the POLL promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 103348902 103348912 8.0E-06 GGTGACTCATG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 103348902 103348912 6.0E-06 CATGAGTCACC 11 GABPA_MA0062.2 JASPAR + 103348029 103348039 1.0E-06 CCGGAAGTGAC 11 SOX10_HMG_full_dimeric_15_3 SELEX - 103348321 103348335 1.0E-06 ATGTGTTCCAGTCAT 15 NHLH1_MA0048.1 JASPAR + 103347682 103347693 3.0E-06 CCGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR - 103347682 103347693 3.0E-06 CCGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR + 103347749 103347760 2.0E-06 TCGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR - 103347749 103347760 6.0E-06 CCGCAGCTGCGA 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 103348953 103348970 7.0E-06 GAAATTAAAATCATTTAC 18 ELF4_ETS_full_monomeric_12_1 SELEX + 103348026 103348037 9.0E-06 CAGCCGGAAGTG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 103348050 103348065 2.0E-06 GGTTGCCATGGCAGCG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 103348050 103348065 2.0E-06 CGCTGCCATGGCAACC 16 SOX9_HMG_full_dimeric_17_3 SELEX - 103348320 103348336 2.0E-06 CATGTGTTCCAGTCATG 17 EWSR1-FLI1_MA0149.1 JASPAR + 103347983 103348000 1.0E-06 CGAAGGGGGGAAGGAGGG 18 SOX7_HMG_full_dimeric_17_2 SELEX - 103348320 103348336 1.0E-06 CATGTGTTCCAGTCATG 17 NFYA_MA0060.1 JASPAR + 103347964 103347979 4.0E-06 CAGAGCCAATGAGAGC 16 NFYA_MA0060.1 JASPAR + 103348922 103348937 7.0E-06 AGGGGCCAATCAGGGA 16 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 103348958 103348971 3.0E-06 TAAAATCATTTACT 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 103348954 103348969 0.0E+00 TAAATGATTTTAATTT 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 103348954 103348969 1.0E-06 TAAATGATTTTAATTT 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 103348050 103348065 1.0E-06 GGTTGCCATGGCAGCG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 103348050 103348065 1.0E-06 CGCTGCCATGGCAACC 16 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 103348958 103348971 8.0E-06 TAAAATCATTTACT 14 Sox17_HMG_DBD_dimeric_15_2 SELEX - 103348321 103348335 4.0E-06 ATGTGTTCCAGTCAT 15 ELF3_ETS_full_monomeric_13_1 SELEX + 103348026 103348038 2.0E-06 CAGCCGGAAGTGA 13 YY2_C2H2_full_monomeric_11_1 SELEX - 103348091 103348101 1.0E-06 ACCGCCATCTT 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 103348050 103348065 1.0E-06 GGTTGCCATGGCAGCG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 103348050 103348065 1.0E-06 CGCTGCCATGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 103348050 103348065 1.0E-06 GGTTGCCATGGCAGCG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 103348050 103348065 0.0E+00 CGCTGCCATGGCAACC 16 EHF_ETS_full_monomeric_12_1 SELEX + 103348026 103348037 7.0E-06 CAGCCGGAAGTG 12 JDP2_bZIP_full_dimeric_9_1 SELEX - 103348903 103348911 1.0E-05 ATGAGTCAC 9 SOX18_HMG_full_dimeric_15_3 SELEX - 103348321 103348335 2.0E-06 ATGTGTTCCAGTCAT 15 GABPA_ETS_full_monomeric_10_1 SELEX + 103348028 103348037 9.0E-06 GCCGGAAGTG 10 ELF3_ETS_DBD_monomeric_12_1 SELEX + 103348026 103348037 7.0E-06 CAGCCGGAAGTG 12 NHLH1_bHLH_full_dimeric_10_1 SELEX + 103347683 103347692 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 103347683 103347692 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX + 103347750 103347759 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 103347750 103347759 2.0E-06 CGCAGCTGCG 10 V_HOXA9_01_M01351 TRANSFAC + 103348950 103348966 1.0E-05 GTGGAAATTAAAATCAT 17 RXR_RAR_DR5_MA0159.1 JASPAR + 103348305 103348321 4.0E-06 GGTTCACAGAGATGACA 17 V_FLI1_Q6_M01208 TRANSFAC + 103348029 103348039 1.0E-06 CCGGAAGTGAC 11 V_BACH2_01_M00490 TRANSFAC - 103348902 103348912 2.0E-06 CATGAGTCACC 11 V_BCL6_01_M01183 TRANSFAC + 103348983 103348998 8.0E-06 CATTTAGGAAGACTTT 16 V_AR_Q6_01_M01996 TRANSFAC - 103349021 103349035 2.0E-06 TTTCTTTCTGTTCTA 15 V_RFX4_03_M02789 TRANSFAC - 103348048 103348062 3.0E-06 TGCCATGGCAACCGT 15 V_YY1_Q6_M00793 TRANSFAC - 103348090 103348098 7.0E-06 GCCATCTTT 9 V_GABPA_04_M02858 TRANSFAC - 103348082 103348097 2.0E-06 CCATCTTTCCCCTGCT 16 V_BACH1_01_M00495 TRANSFAC - 103348900 103348914 4.0E-06 AACATGAGTCACCAG 15 V_POLY_C_M00212 TRANSFAC + 103348955 103348972 1.0E-06 AATTAAAATCATTTACTC 18 V_ER81_02_M02065 TRANSFAC + 103348028 103348037 1.0E-05 GCCGGAAGTG 10 V_GADP_01_M01258 TRANSFAC - 103348026 103348037 1.0E-06 CACTTCCGGCTG 12 V_GR_01_M00955 TRANSFAC - 103349016 103349042 2.0E-06 ATATCTTTTTCTTTCTGTTCTAGTTTA 27 V_GR_Q6_M00192 TRANSFAC - 103349020 103349038 1.0E-05 CTTTTTCTTTCTGTTCTAG 19 V_TEL2_Q6_M00678 TRANSFAC - 103348029 103348038 9.0E-06 TCACTTCCGG 10 V_ELK1_02_M00025 TRANSFAC + 103348025 103348038 0.0E+00 TCAGCCGGAAGTGA 14 V_AP1_Q2_01_M00924 TRANSFAC + 103348904 103348915 9.0E-06 TGACTCATGTTC 12 V_GR_Q6_02_M01836 TRANSFAC - 103349020 103349032 6.0E-06 CTTTCTGTTCTAG 13 V_ZFP105_04_M02931 TRANSFAC - 103348958 103348974 2.0E-06 ACGAGTAAATGATTTTA 17 V_ALPHACP1_01_M00687 TRANSFAC + 103347966 103347976 7.0E-06 GAGCCAATGAG 11 V_NFYC_Q5_M02107 TRANSFAC + 103347966 103347979 1.0E-06 GAGCCAATGAGAGC 14 V_EHF_06_M02745 TRANSFAC + 103348024 103348038 4.0E-06 GTCAGCCGGAAGTGA 15 V_IPF1_05_M01255 TRANSFAC + 103348952 103348963 5.0E-06 GGAAATTAAAAT 12 V_HNF1_01_M00132 TRANSFAC - 103348957 103348971 7.0E-06 AGTAAATGATTTTAA 15 V_NCX_01_M00484 TRANSFAC - 103347953 103347962 5.0E-06 TGGTAAGTGG 10 V_HDX_01_M01333 TRANSFAC + 103348954 103348970 1.0E-05 AAATTAAAATCATTTAC 17 V_NFY_01_M00287 TRANSFAC + 103347964 103347979 3.0E-06 CAGAGCCAATGAGAGC 16 V_NFY_01_M00287 TRANSFAC + 103348922 103348937 5.0E-06 AGGGGCCAATCAGGGA 16 V_VDR_Q6_M00961 TRANSFAC - 103348304 103348315 1.0E-06 CTCTGTGAACCT 12 V_RXR_RAR_01_M02272 TRANSFAC + 103348305 103348321 4.0E-06 GGTTCACAGAGATGACA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 103347983 103348000 1.0E-06 CGAAGGGGGGAAGGAGGG 18 V_PR_02_M00957 TRANSFAC - 103349016 103349042 3.0E-06 ATATCTTTTTCTTTCTGTTCTAGTTTA 27 V_HOXA10_01_M01464 TRANSFAC + 103348950 103348965 3.0E-06 GTGGAAATTAAAATCA 16 V_GATA6_04_M02757 TRANSFAC + 103348886 103348902 4.0E-06 TTTCAAGATAACAACTG 17 V_NFYA_Q5_M02106 TRANSFAC + 103347966 103347979 1.0E-06 GAGCCAATGAGAGC 14 V_NFYA_Q5_M02106 TRANSFAC + 103348924 103348937 7.0E-06 GGGCCAATCAGGGA 14 V_TCF3_05_M02920 TRANSFAC + 103348949 103348963 9.0E-06 TGTGGAAATTAAAAT 15 V_NF1_Q6_M00193 TRANSFAC - 103348996 103349013 1.0E-05 GCTTGGCACATAGTAAAA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.