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APEX2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27301 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 chrX + 55021755 - 55027255 55026755 Transcription Factor Binding Sites   Download all TFBS in the APEX2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 55022848 55022860 1.0E-06 GTAAACATAAAAG 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 55026063 55026075 7.0E-06 GATAACATATACA 13 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 55022854 55022870 5.0E-06 GGACAAAATTGTAAACA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 55022852 55022863 7.0E-06 ATTGTAAACATA 12 FOXO3_MA0157.1 JASPAR - 55022854 55022861 7.0E-06 TGTAAACA 8 FOXD1_MA0031.1 JASPAR - 55022853 55022860 7.0E-06 GTAAACAT 8 GATA5_GATA_DBD_monomeric_8_1 SELEX + 55022921 55022928 7.0E-06 AGATAAGA 8 GATA5_GATA_DBD_monomeric_8_1 SELEX - 55026292 55026299 7.0E-06 AGATAAGA 8 GATA4_GATA_DBD_monomeric_8_1 SELEX + 55022921 55022928 7.0E-06 AGATAAGA 8 GATA4_GATA_DBD_monomeric_8_1 SELEX - 55026292 55026299 7.0E-06 AGATAAGA 8 TCF7L1_HMG_full_monomeric_12_1 SELEX - 55022847 55022858 4.0E-06 AAACATAAAAGA 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 55022844 55022858 2.0E-06 AAACATAAAAGAGAT 15 LEF1_HMG_DBD_monomeric_15_1 SELEX + 55026876 55026890 5.0E-06 GAACATCAATGGGAT 15 SP4_C2H2_full_monomeric_17_1 SELEX - 55026437 55026453 8.0E-06 AAAGCCCCGCCCTCAGT 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 55022847 55022858 4.0E-06 AAACATAAAAGA 12 Gata1_MA0035.2 JASPAR + 55022919 55022929 2.0E-06 TGAGATAAGAA 11 GATA3_GATA_full_monomeric_8_1 SELEX + 55022921 55022928 7.0E-06 AGATAAGA 8 GATA3_GATA_full_monomeric_8_1 SELEX - 55026292 55026299 7.0E-06 AGATAAGA 8 FEV_MA0156.1 JASPAR + 55022910 55022917 1.0E-05 CAGGAAAT 8 FEV_MA0156.1 JASPAR - 55026122 55026129 1.0E-05 CAGGAAAT 8 FOXB1_forkhead_full_monomeric_9_1 SELEX - 55022853 55022861 3.0E-06 TGTAAACAT 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 55022848 55022860 2.0E-06 GTAAACATAAAAG 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 55022853 55022863 8.0E-06 ATTGTAAACAT 11 V_FOXP1_01_M00987 TRANSFAC + 55022847 55022866 2.0E-06 TCTTTTATGTTTACAATTTT 20 V_FREAC7_01_M00293 TRANSFAC - 55022850 55022865 9.0E-06 AAATTGTAAACATAAA 16 V_FXR_Q3_M00631 TRANSFAC - 55026619 55026632 5.0E-06 TAGGGGCAATGAAT 14 V_GATA1_Q6_M02004 TRANSFAC + 55022916 55022930 9.0E-06 ATCTGAGATAAGAAG 15 V_GATA1_Q6_M02004 TRANSFAC - 55026140 55026154 7.0E-06 TTCTCAGATAAGTGA 15 V_FOXO3_02_M02270 TRANSFAC - 55022854 55022861 7.0E-06 TGTAAACA 8 V_GATA2_02_M00348 TRANSFAC + 55022919 55022928 8.0E-06 TGAGATAAGA 10 V_GATA2_02_M00348 TRANSFAC - 55026292 55026301 8.0E-06 TGAGATAAGA 10 V_FOXA2_04_M02749 TRANSFAC - 55022849 55022865 0.0E+00 AAATTGTAAACATAAAA 17 V_ETS_B_M00340 TRANSFAC + 55022908 55022921 1.0E-05 AGCAGGAAATCTGA 14 V_ETS_B_M00340 TRANSFAC + 55026793 55026806 2.0E-06 AACAGGAAGCAGTT 14 V_IRF_Q6_01_M00972 TRANSFAC - 55026137 55026147 8.0E-06 ATAAGTGAAAT 11 V_FOXO3A_Q1_M01137 TRANSFAC - 55022850 55022861 5.0E-06 TGTAAACATAAA 12 V_SOX11_04_M02899 TRANSFAC - 55022853 55022866 7.0E-06 AAAATTGTAAACAT 14 V_EAR2_Q2_M01728 TRANSFAC + 55026341 55026354 7.0E-06 TTCCCTTTGCCCAG 14 V_HNF3_Q6_01_M01012 TRANSFAC + 55022849 55022866 2.0E-06 TTTTATGTTTACAATTTT 18 V_FOXJ1_03_M02750 TRANSFAC - 55022848 55022863 0.0E+00 ATTGTAAACATAAAAG 16 V_GATA_C_M00203 TRANSFAC - 55026289 55026299 3.0E-06 AGATAAGACTT 11 V_NERF_Q2_M00531 TRANSFAC + 55026792 55026809 1.0E-06 GAACAGGAAGCAGTTCGC 18 V_SP100_04_M02913 TRANSFAC + 55026480 55026494 0.0E+00 TCCGTCGCTTAAAAA 15 V_TAL1_GATA1_01_M02243 TRANSFAC + 55022910 55022927 9.0E-06 CAGGAAATCTGAGATAAG 18 V_PPARGRXRA_01_M02262 TRANSFAC - 55026252 55026266 4.0E-06 TTGGGGCAGAGGGGA 15 V_ETS_Q4_M00771 TRANSFAC - 55026795 55026806 4.0E-06 AACTGCTTCCTG 12 V_GC_01_M00255 TRANSFAC + 55026439 55026452 1.0E-06 TGAGGGCGGGGCTT 14 V_TCF3_04_M02816 TRANSFAC - 55022843 55022859 7.0E-06 TAAACATAAAAGAGATG 17 V_SPI1_03_M02078 TRANSFAC + 55026690 55026699 6.0E-06 TGAGGAAGTT 10 V_FOXO1_02_M00474 TRANSFAC + 55022850 55022863 2.0E-06 TTTATGTTTACAAT 14 V_GATA3_05_M02859 TRANSFAC - 55026057 55026078 1.0E-05 TTCTGTATATGTTATCTCATTT 22 V_TEF_Q6_M00672 TRANSFAC - 55022851 55022862 2.0E-06 TTGTAAACATAA 12 V_NFAT_Q6_M00302 TRANSFAC + 55026546 55026557 3.0E-06 TAGAGGAAAAAC 12 V_XFD3_01_M00269 TRANSFAC - 55022850 55022863 0.0E+00 ATTGTAAACATAAA 14 V_IRF2_01_M00063 TRANSFAC - 55026136 55026148 4.0E-06 GATAAGTGAAATC 13 V_IRF_Q6_M00772 TRANSFAC + 55026133 55026147 9.0E-06 TTCGATTTCACTTAT 15 Tal1_Gata1_MA0140.1 JASPAR + 55022910 55022927 9.0E-06 CAGGAAATCTGAGATAAG 18 V_GATA1_09_M02254 TRANSFAC + 55022919 55022929 2.0E-06 TGAGATAAGAA 11 V_TCF7_03_M02817 TRANSFAC - 55022843 55022859 6.0E-06 TAAACATAAAAGAGATG 17 V_XFD2_01_M00268 TRANSFAC - 55022850 55022863 1.0E-06 ATTGTAAACATAAA 14 V_CDC5_01_M00478 TRANSFAC + 55026061 55026072 4.0E-06 GAGATAACATAT 12 V_STAT4_Q5_M02117 TRANSFAC + 55030395 55030404 4.0E-06 TTATGGGAAA 10 V_POU6F1_01_M00465 TRANSFAC - 55022897 55022907 5.0E-06 GCTAAAATTAT 11 V_CETS1P54_03_M01078 TRANSFAC + 55026791 55026806 9.0E-06 TGAACAGGAAGCAGTT 16 V_HOXD9_Q2_M01834 TRANSFAC - 55022849 55022858 2.0E-06 AAACATAAAA 10 V_FREAC2_01_M00290 TRANSFAC - 55022850 55022865 1.0E-05 AAATTGTAAACATAAA 16 V_ELF1_Q6_M00746 TRANSFAC + 55026544 55026555 2.0E-06 AGTAGAGGAAAA 12 V_ZIC2_05_M02940 TRANSFAC + 55022902 55022916 9.0E-06 TTTAGCAGCAGGAAA 15 V_ALPHACP1_01_M00687 TRANSFAC + 55026676 55026686 2.0E-06 CCGCCAATGAG 11 V_SIRT6_01_M01797 TRANSFAC + 55022921 55022928 7.0E-06 AGATAAGA 8 V_SIRT6_01_M01797 TRANSFAC - 55026292 55026299 7.0E-06 AGATAAGA 8 V_FOXL1_04_M02753 TRANSFAC - 55022849 55022865 0.0E+00 AAATTGTAAACATAAAA 17 V_GATA3_02_M00350 TRANSFAC + 55022919 55022928 5.0E-06 TGAGATAAGA 10 V_GATA3_02_M00350 TRANSFAC - 55026292 55026301 5.0E-06 TGAGATAAGA 10 V_DMRT7_01_M01151 TRANSFAC + 55022854 55022867 4.0E-06 TGTTTACAATTTTG 14 V_ZFP206_01_M01742 TRANSFAC - 55026748 55026758 4.0E-06 TGCGCAGGCGT 11 V_FPM315_01_M01587 TRANSFAC - 55026243 55026254 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 55026246 55026257 2.0E-06 AGGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 55026668 55026679 6.0E-06 GCGGGAGGAGGA 12 V_SPIC_02_M02077 TRANSFAC + 55026690 55026699 3.0E-06 TGAGGAAGTT 10 V_STAT6_02_M00500 TRANSFAC - 55022911 55022918 1.0E-05 GATTTCCT 8 V_ETS1_B_M00339 TRANSFAC + 55026794 55026808 5.0E-06 ACAGGAAGCAGTTCG 15 V_IRF1_Q6_01_M01881 TRANSFAC + 55026135 55026148 4.0E-06 CGATTTCACTTATC 14 V_GATA2_03_M00349 TRANSFAC + 55022919 55022928 3.0E-06 TGAGATAAGA 10 V_GATA2_03_M00349 TRANSFAC - 55026292 55026301 3.0E-06 TGAGATAAGA 10 V_MEF2_01_M00006 TRANSFAC - 55022893 55022908 4.0E-06 TGCTAAAATTATCCTT 16 V_HMEF2_Q6_M00406 TRANSFAC - 55022893 55022908 2.0E-06 TGCTAAAATTATCCTT 16 V_TFE_Q6_M01029 TRANSFAC - 55022834 55022841 1.0E-05 TCATGTGA 8 V_LPOLYA_B_M00318 TRANSFAC + 55026264 55026271 7.0E-06 CAATAAAG 8 V_GATA6_04_M02757 TRANSFAC + 55026057 55026073 1.0E-06 AAATGAGATAACATATA 17 V_NFYA_Q5_M02106 TRANSFAC + 55026676 55026689 3.0E-06 CCGCCAATGAGAGC 14 V_GFI1_Q6_01_M02010 TRANSFAC - 55022913 55022922 8.0E-06 CTCAGATTTC 10 V_TCF11MAFG_01_M00284 TRANSFAC + 55026054 55026075 8.0E-06 ATGAAATGAGATAACATATACA 22 V_FEV_01_M02269 TRANSFAC + 55022910 55022917 1.0E-05 CAGGAAAT 8 V_FEV_01_M02269 TRANSFAC - 55026122 55026129 1.0E-05 CAGGAAAT 8 V_STAT1_Q6_M01823 TRANSFAC + 55030395 55030404 4.0E-06 TTATGGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 55030392 55030413 8.0E-06 CCTTTATGGGAAAGCGGAGCTT 22 V_EVI1_03_M00080 TRANSFAC + 55026062 55026072 8.0E-06 AGATAACATAT 11 V_FOXK1_03_M02752 TRANSFAC - 55022849 55022865 0.0E+00 AAATTGTAAACATAAAA 17 V_SMAD1_01_M01590 TRANSFAC + 55026208 55026219 6.0E-06 CAAGACAAAAGC 12 PPARG_RXRA_MA0065.2 JASPAR - 55026252 55026266 4.0E-06 TTGGGGCAGAGGGGA 15 V_SPIB_03_M02076 TRANSFAC + 55026690 55026699 2.0E-06 TGAGGAAGTT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.