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BBS9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27241 Bardet-Biedl syndrome 9 chr7 + 33164151 - 33169651 33169151 Transcription Factor Binding Sites   Download all TFBS in the BBS9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 33168898 33168909 2.0E-06 GCCACGCCCCCC 12 SP3_C2H2_DBD_monomeric_11_1 SELEX - 33168899 33168909 3.0E-06 GCCACGCCCCC 11 SOX10_HMG_full_dimeric_16_1 SELEX - 33168575 33168590 6.0E-06 AACAGTTTCCAGTTTT 16 SPIC_ETS_full_monomeric_14_1 SELEX + 33168565 33168578 5.0E-06 AAAAAAAGGAAAAA 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 33168899 33168909 1.0E-06 GCCACGCCCCC 11 EVX1_homeodomain_DBD_monomeric_10_1 SELEX + 33168981 33168990 6.0E-06 AGTAATTATC 10 SOX9_HMG_full_dimeric_16_1 SELEX - 33168575 33168590 3.0E-06 AACAGTTTCCAGTTTT 16 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 33168897 33168910 1.0E-06 GGCCACGCCCCCCC 14 SOX8_HMG_DBD_dimeric_16_1 SELEX - 33168575 33168590 1.0E-06 AACAGTTTCCAGTTTT 16 ZNF435_C2H2_full_dimeric_18_1 SELEX - 33169167 33169184 4.0E-06 CCTGTTGTCATAGCACTT 18 EWSR1-FLI1_MA0149.1 JASPAR - 33169268 33169285 5.0E-06 GGAAAGGATGGAGGAGGC 18 EWSR1-FLI1_MA0149.1 JASPAR - 33169271 33169288 4.0E-06 GGAGGAAAGGATGGAGGA 18 Klf4_MA0039.2 JASPAR - 33168854 33168863 5.0E-06 TGGGTGGGGC 10 Tcfcp2l1_MA0145.1 JASPAR + 33170089 33170102 6.0E-06 CCAGTCAAATCCTG 14 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 33168563 33168571 8.0E-06 GTAAAAAAA 9 SP1_MA0079.2 JASPAR + 33168839 33168848 7.0E-06 CCCCGCCCCC 10 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX + 33168981 33168990 2.0E-06 AGTAATTATC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 33168835 33168851 4.0E-06 GACGCCCCGCCCCCACT 17 SP4_C2H2_full_monomeric_17_1 SELEX - 33168896 33168912 1.0E-06 CAGGCCACGCCCCCCCG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 33168899 33168909 5.0E-06 GCCACGCCCCC 11 SOX7_HMG_full_dimeric_16_1 SELEX - 33168575 33168590 3.0E-06 AACAGTTTCCAGTTTT 16 MEOX1_homeodomain_full_monomeric_10_1 SELEX + 33168981 33168990 3.0E-06 AGTAATTATC 10 GLI2_C2H2_DBD_monomeric_12_1 SELEX + 33168709 33168720 6.0E-06 GCGACCACCCTC 12 PLAG1_MA0163.1 JASPAR - 33168845 33168858 4.0E-06 GGGGCCTAGTGGGG 14 V_AML_Q6_M00769 TRANSFAC - 33170038 33170052 8.0E-06 ACTGTTGTGGTCTCC 15 V_BCL6_01_M01183 TRANSFAC - 33168570 33168585 6.0E-06 TTTCCAGTTTTTCCTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 33168585 33168596 8.0E-06 ACTGTTCAAAAG 12 V_FOXJ2_02_M00423 TRANSFAC + 33170042 33170055 6.0E-06 ACCACAACAGTTTA 14 V_SP1_Q6_01_M00931 TRANSFAC - 33168838 33168847 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 33169029 33169038 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC - 33168840 33168850 6.0E-06 GTGGGGGCGGG 11 V_NFAT3_Q3_M01734 TRANSFAC - 33168571 33168580 6.0E-06 AGTTTTTCCT 10 V_NFAT3_Q3_M01734 TRANSFAC - 33168768 33168777 6.0E-06 TTTTTTTCCT 10 V_SP1_03_M02281 TRANSFAC + 33168839 33168848 7.0E-06 CCCCGCCCCC 10 V_AREB6_04_M00415 TRANSFAC + 33168551 33168559 8.0E-06 CTGTTTCAA 9 V_VAX2_01_M01327 TRANSFAC + 33168977 33168992 9.0E-06 TTGCAGTAATTATCAC 16 V_TCFAP2E_04_M02926 TRANSFAC + 33168558 33168571 6.0E-06 AAATAGTAAAAAAA 14 V_DLX5_01_M01388 TRANSFAC + 33168979 33168994 9.0E-06 GCAGTAATTATCACTC 16 V_NKX62_Q2_M00489 TRANSFAC - 33168981 33168992 4.0E-06 GTGATAATTACT 12 V_CDP_04_M01344 TRANSFAC - 33168980 33168994 1.0E-06 GAGTGATAATTACTG 15 V_GC_01_M00255 TRANSFAC - 33168836 33168849 2.0E-06 TGGGGGCGGGGCGT 14 V_HELIOSA_02_M01004 TRANSFAC + 33168568 33168578 0.0E+00 AAAAGGAAAAA 11 V_RFXDC2_04_M02894 TRANSFAC + 33170032 33170048 0.0E+00 TTACTTGGAGACCACAA 17 V_ZFP410_03_M02832 TRANSFAC - 33169250 33169266 1.0E-06 GTGAATGGGATGTAGCA 17 V_GATA3_05_M02859 TRANSFAC + 33170062 33170083 1.0E-06 CTGCGCTGATTTTATCAGCACC 22 V_NFAT_Q6_M00302 TRANSFAC + 33168568 33168579 4.0E-06 AAAAGGAAAAAC 12 V_HOXA3_02_M01337 TRANSFAC + 33168977 33168990 1.0E-05 TTGCAGTAATTATC 14 V_RFX1_01_M00280 TRANSFAC - 33170029 33170045 8.0E-06 TGGTCTCCAAGTAACAA 17 V_SP1_Q6_M00196 TRANSFAC - 33168837 33168849 1.0E-06 TGGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 33169278 33169291 9.0E-06 CGAGGAGGAAAGGA 14 V_CUX1_04_M02959 TRANSFAC - 33168980 33168994 1.0E-06 GAGTGATAATTACTG 15 V_NFE4_Q5_M02105 TRANSFAC + 33168714 33168725 2.0E-06 CACCCTCGCCAC 12 V_SP1SP3_Q4_M01219 TRANSFAC + 33169266 33169276 5.0E-06 CCGCCTCCTCC 11 V_MEF2_04_M00233 TRANSFAC + 33168556 33168577 6.0E-06 TCAAATAGTAAAAAAAGGAAAA 22 V_PEBP_Q6_M00984 TRANSFAC + 33170038 33170052 7.0E-06 GGAGACCACAACAGT 15 V_PBX1_05_M01967 TRANSFAC - 33170084 33170097 1.0E-05 TTTGACTGGCAGGA 14 V_OCAB_Q6_M02113 TRANSFAC - 33169305 33169315 6.0E-06 AAATGCAAGTC 11 V_SP4_Q5_M01273 TRANSFAC + 33168838 33168848 1.0E-06 GCCCCGCCCCC 11 V_HOXB7_01_M01396 TRANSFAC - 33168977 33168992 2.0E-06 GTGATAATTACTGCAA 16 V_GATA1_05_M00346 TRANSFAC - 33170071 33170080 6.0E-06 GCTGATAAAA 10 V_MTF1_06_M02882 TRANSFAC + 33168558 33168571 0.0E+00 AAATAGTAAAAAAA 14 V_GABPBETA_Q3_M01876 TRANSFAC - 33169223 33169233 7.0E-06 AGCGGAAGGGA 11 V_HOXB8_01_M01451 TRANSFAC + 33168978 33168993 1.0E-05 TGCAGTAATTATCACT 16 V_CPHX_01_M01478 TRANSFAC - 33170066 33170079 5.0E-06 CTGATAAAATCAGC 14 V_PADS_C_M00211 TRANSFAC - 33170039 33170047 4.0E-06 TGTGGTCTC 9 V_ZABC1_01_M01306 TRANSFAC + 33169051 33169058 1.0E-05 ATTCCAAC 8 V_ZFP281_01_M01597 TRANSFAC - 33168839 33168849 6.0E-06 TGGGGGCGGGG 11 V_LEF1TCF1_Q4_M00978 TRANSFAC - 33168536 33168546 1.0E-05 GCTTTGAAGTT 11 V_HB9_01_M01349 TRANSFAC - 33168977 33168992 6.0E-06 GTGATAATTACTGCAA 16 V_DLX3_02_M02051 TRANSFAC - 33168982 33168989 5.0E-06 ATAATTAC 8 V_EWSR1FLI1_01_M02252 TRANSFAC - 33169268 33169285 5.0E-06 GGAAAGGATGGAGGAGGC 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 33169271 33169288 4.0E-06 GGAGGAAAGGATGGAGGA 18 V_RFX3_05_M02892 TRANSFAC + 33170028 33170050 1.0E-06 CTTGTTACTTGGAGACCACAACA 23 V_HOXA7_03_M01394 TRANSFAC - 33168977 33168992 6.0E-06 GTGATAATTACTGCAA 16 V_SP1_Q2_01_M00933 TRANSFAC + 33168839 33168848 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 33168665 33168678 4.0E-06 GGCGGGGGTGGTGC 14 V_DLX1_01_M01439 TRANSFAC + 33168977 33168990 1.0E-06 TTGCAGTAATTATC 14 V_SP1_Q4_01_M00932 TRANSFAC - 33168837 33168849 3.0E-06 TGGGGGCGGGGCG 13 V_HOXC8_01_M01321 TRANSFAC + 33168977 33168992 5.0E-06 TTGCAGTAATTATCAC 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.