Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TJP3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27134 tight junction protein 3 chr19 + 3703334 - 3708834 3708334 Transcription Factor Binding Sites   Download all TFBS in the TJP3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 3706235 3706253 0.0E+00 TGGCCACCAGGCGGCGCCA 19 SPIC_ETS_full_monomeric_14_1 SELEX - 3710566 3710579 1.0E-06 CTAAAGAGGAAGAA 14 FOXA1_MA0148.1 JASPAR + 3710605 3710615 2.0E-06 TGTTTGCTCAG 11 ESR2_MA0258.1 JASPAR + 3708799 3708816 6.0E-06 AAGGGTCATTGTTACCTA 18 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 3710463 3710473 4.0E-06 TGCCTCAGGCT 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 3710463 3710473 1.0E-06 AGCCTGAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 3710463 3710473 2.0E-06 TGCCTCAGGCT 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 3710463 3710473 3.0E-06 AGCCTGAGGCA 11 RHOXF1_homeodomain_full_dimeric_9_1 SELEX - 3708735 3708743 8.0E-06 AGATAATCC 9 SPIB_ETS_DBD_monomeric_14_1 SELEX - 3710566 3710579 8.0E-06 CTAAAGAGGAAGAA 14 TCF7L1_HMG_full_monomeric_12_1 SELEX + 3708791 3708802 1.0E-05 AAACTTAAAAGG 12 SP1_MA0079.2 JASPAR - 3710669 3710678 3.0E-06 CCCCTCCCCC 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 3708577 3708590 1.0E-06 GTGGAAAAGCACAG 14 CTCF_C2H2_full_monomeric_17_1 SELEX + 3706236 3706252 5.0E-06 GGCGCCGCCTGGTGGCC 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 3708800 3708816 1.0E-06 TAGGTAACAATGACCCT 17 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 3710463 3710473 2.0E-06 TGCCTCAGGCT 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 3710463 3710473 1.0E-06 AGCCTGAGGCA 11 PPARG_MA0066.1 JASPAR - 3708798 3708817 0.0E+00 CTAGGTAACAATGACCCTTT 20 PPARG_MA0066.1 JASPAR + 3708799 3708818 8.0E-06 AAGGGTCATTGTTACCTAGG 20 Tp53_p53l_DBD_dimeric_17_1 SELEX + 3706309 3706325 7.0E-06 TCATTCCAAAAACATGT 17 EGR2_C2H2_DBD_monomeric_11_1 SELEX - 3708707 3708717 6.0E-06 ATGCCCACGCA 11 SPI1_ETS_full_monomeric_14_1 SELEX - 3710566 3710579 1.0E-05 CTAAAGAGGAAGAA 14 DPRX_homeodomain_DBD_monomeric_11_1 SELEX - 3708734 3708744 3.0E-06 CAGATAATCCC 11 DPRX_homeodomain_DBD_monomeric_10_1 SELEX + 3708733 3708742 2.0E-06 AGGGATTATC 10 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 3710463 3710473 3.0E-06 TGCCTCAGGCT 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 3710463 3710473 2.0E-06 AGCCTGAGGCA 11 V_AREB6_01_M00412 TRANSFAC - 3708554 3708566 1.0E-06 GACTTACCTGTCT 13 V_KLF15_Q2_M01714 TRANSFAC + 3708878 3708891 4.0E-06 GAGGAGGGGAGGGG 14 V_FXR_Q3_M00631 TRANSFAC - 3708751 3708764 3.0E-06 CAGGTGCAGTAACT 14 V_OBOX5_05_M03066 TRANSFAC + 3708730 3708746 4.0E-06 CGTAGGGATTATCTGAC 17 V_RORA1_01_M00156 TRANSFAC + 3708795 3708807 8.0E-06 TTAAAAGGGTCAT 13 V_HNF4_Q6_M00967 TRANSFAC + 3710536 3710544 1.0E-05 AAAGTCCAG 9 V_SP1_03_M02281 TRANSFAC - 3710669 3710678 3.0E-06 CCCCTCCCCC 10 V_PU1_Q4_M01172 TRANSFAC + 3710560 3710578 0.0E+00 TACTTGTTCTTCCTCTTTA 19 V_ZNF219_01_M01122 TRANSFAC - 3710664 3710675 7.0E-06 CTCCCCCCAGCC 12 V_SOX7_03_M02807 TRANSFAC - 3708797 3708818 9.0E-06 CCTAGGTAACAATGACCCTTTT 22 V_OBOX5_02_M01480 TRANSFAC + 3708730 3708746 4.0E-06 CGTAGGGATTATCTGAC 17 V_MTERF_01_M01245 TRANSFAC + 3708847 3708860 3.0E-06 GGGCACAGGTTGGT 14 V_IRX4_01_M01410 TRANSFAC - 3706314 3706330 9.0E-06 TCAATACATGTTTTTGG 17 V_SP1_Q6_M00196 TRANSFAC + 3710668 3710680 8.0E-06 GGGGGGAGGGGTC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 3708877 3708890 1.0E-06 TGAGGAGGGGAGGG 14 V_HNF3_Q6_M00791 TRANSFAC - 3710603 3710615 8.0E-06 CTGAGCAAACACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 3710605 3710615 1.0E-05 TGTTTGCTCAG 11 V_OBOX2_01_M01364 TRANSFAC + 3708729 3708745 9.0E-06 TCGTAGGGATTATCTGA 17 V_PAX6_Q2_M00979 TRANSFAC + 3708782 3708795 1.0E-05 CTGAGCTGGAAACT 14 V_PITX3_01_M01343 TRANSFAC + 3708731 3708746 5.0E-06 GTAGGGATTATCTGAC 16 V_ERALPHA_01_M01801 TRANSFAC + 3708801 3708815 6.0E-06 GGGTCATTGTTACCT 15 V_ERALPHA_01_M01801 TRANSFAC - 3708801 3708815 7.0E-06 AGGTAACAATGACCC 15 V_RFX_Q6_M00975 TRANSFAC + 3708409 3708417 4.0E-06 CTGTTGCCA 9 V_LMO2COM_01_M00277 TRANSFAC - 3708756 3708767 0.0E+00 CGCCAGGTGCAG 12 V_CTCF_02_M01259 TRANSFAC - 3706237 3706256 7.0E-06 CTATGGCCACCAGGCGGCGC 20 V_IRX3_01_M01318 TRANSFAC - 3706314 3706330 9.0E-06 TCAATACATGTTTTTGG 17 V_CTCF_01_M01200 TRANSFAC - 3706235 3706254 1.0E-06 ATGGCCACCAGGCGGCGCCA 20 V_IRX5_01_M01472 TRANSFAC - 3706314 3706330 7.0E-06 TCAATACATGTTTTTGG 17 V_GLI3_01_M01596 TRANSFAC - 3708537 3708547 2.0E-06 CTGGGTGGCCT 11 V_IRX3_02_M01485 TRANSFAC - 3706314 3706330 8.0E-06 TCAATACATGTTTTTGG 17 V_MINI19_B_M00323 TRANSFAC - 3706218 3706238 8.0E-06 GCCAGAAACCACGCAACCGGC 21 V_ZFP187_04_M02934 TRANSFAC + 3706295 3706310 3.0E-06 GGACCCTAGTCCATTC 16 V_OBOX2_02_M03064 TRANSFAC + 3708729 3708745 9.0E-06 TCGTAGGGATTATCTGA 17 V_AIRE_01_M00999 TRANSFAC - 3706299 3706324 8.0E-06 CATGTTTTTGGAATGAATGGACTAGG 26 V_OTX2_01_M01387 TRANSFAC + 3708730 3708746 5.0E-06 CGTAGGGATTATCTGAC 17 V_TBP_04_M02918 TRANSFAC - 3708789 3708803 5.0E-06 CCCTTTTAAGTTTCC 15 V_ZFP281_01_M01597 TRANSFAC + 3710668 3710678 2.0E-06 GGGGGGAGGGG 11 V_IRX2_01_M01405 TRANSFAC - 3706314 3706330 6.0E-06 TCAATACATGTTTTTGG 17 V_TCFAP2B_04_M02924 TRANSFAC - 3710461 3710475 4.0E-06 TGAGCCTGAGGCATC 15 V_PPARG_02_M00515 TRANSFAC + 3708797 3708819 0.0E+00 AAAAGGGTCATTGTTACCTAGGT 23 V_PPARG_02_M00515 TRANSFAC - 3708797 3708819 1.0E-06 ACCTAGGTAACAATGACCCTTTT 23 V_RFX3_04_M02788 TRANSFAC + 3713196 3713218 8.0E-06 TTTGGATCTTGGCAACCCACAGA 23 V_CTF1_01_M01196 TRANSFAC - 3710582 3710595 8.0E-06 TGGCCCCTGGCCAG 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 3710421 3710434 4.0E-06 GGCGGGGGTGGTGC 14 V_TCFAP2E_03_M02822 TRANSFAC - 3710461 3710475 1.0E-05 TGAGCCTGAGGCATC 15 V_OBOX5_01_M01381 TRANSFAC + 3708730 3708746 3.0E-06 CGTAGGGATTATCTGAC 17 V_OBOX3_02_M03065 TRANSFAC + 3708729 3708745 5.0E-06 TCGTAGGGATTATCTGA 17 TLX1_NFIC_MA0119.1 JASPAR - 3710582 3710595 8.0E-06 TGGCCCCTGGCCAG 14 V_CDPCR3_01_M00105 TRANSFAC + 3706315 3706329 3.0E-06 CAAAAACATGTATTG 15 V_OTX1_01_M01366 TRANSFAC + 3708730 3708746 8.0E-06 CGTAGGGATTATCTGAC 17 V_OBOX6_06_M03067 TRANSFAC - 3708730 3708746 3.0E-06 GTCAGATAATCCCTACG 17 V_OBOX3_01_M01466 TRANSFAC + 3708729 3708745 5.0E-06 TCGTAGGGATTATCTGA 17 V_ESR2_01_M02377 TRANSFAC + 3708799 3708816 6.0E-06 AAGGGTCATTGTTACCTA 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.