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SMC1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 27127 structural maintenance of chromosomes 1B chr22 - 45809000 - 45814500 45809500 Transcription Factor Binding Sites   Download all TFBS in the SMC1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 45809576 45809587 1.0E-05 TGTTGACATTTC 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 45809574 45809585 8.0E-06 AATGTCAACAAC 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 45809575 45809585 6.0E-06 AATGTCAACAA 11 SPIB_ETS_DBD_monomeric_14_1 SELEX - 45809703 45809716 8.0E-06 AAAATAAGGAAGCT 14 RFX2_RFX_DBD_dimeric_15_1 SELEX + 45809558 45809572 4.0E-06 CGTTCCTTAGCAACG 15 RFX2_RFX_DBD_dimeric_15_1 SELEX - 45809558 45809572 0.0E+00 CGTTGCTAAGGAACG 15 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 45809411 45809424 1.0E-06 GTGGAAAATTTCAA 14 RFX3_RFX_DBD_dimeric_15_1 SELEX - 45809558 45809572 0.0E+00 CGTTGCTAAGGAACG 15 RFX4_RFX_DBD_dimeric_15_1 SELEX - 45809558 45809572 3.0E-06 CGTTGCTAAGGAACG 15 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 45809575 45809585 6.0E-06 AATGTCAACAA 11 V_NFAT_Q4_01_M00935 TRANSFAC - 45809415 45809424 0.0E+00 GTGGAAAATT 10 V_ELF5_03_M02057 TRANSFAC + 45809488 45809497 7.0E-06 CGCGGAAAAA 10 V_FOXP1_01_M00987 TRANSFAC - 45810803 45810822 2.0E-06 ACATATGTGTTGTCTGGTAT 20 V_SPI1_01_M01203 TRANSFAC - 45809700 45809716 9.0E-06 AAAATAAGGAAGCTGTA 17 V_SMAD3_Q6_01_M01888 TRANSFAC + 45810851 45810863 7.0E-06 AGACAGACATGAT 13 V_NKX29_01_M01352 TRANSFAC - 45810875 45810891 1.0E-06 TTCAAGGTACTTGAATA 17 V_NFAT3_Q3_M01734 TRANSFAC + 45809414 45809423 7.0E-06 AAATTTTCCA 10 V_RFX4_03_M02789 TRANSFAC + 45809560 45809574 0.0E+00 TTCCTTAGCAACGAG 15 V_P53_DECAMER_Q2_M00761 TRANSFAC - 45809652 45809661 7.0E-06 AGACAAGCCT 10 V_NFAT2_01_M01748 TRANSFAC - 45809416 45809424 8.0E-06 GTGGAAAAT 9 V_RPC155_01_M01798 TRANSFAC + 45810766 45810781 1.0E-06 TCAAAAGTTTAAGACC 16 V_FOXO1_02_M00474 TRANSFAC + 45809572 45809585 2.0E-06 GAGTTGTTGACATT 14 V_GFI1_01_M00250 TRANSFAC + 45810859 45810882 2.0E-06 ATGATTCAAATCATAGTATTCAAG 24 V_NFAT_Q6_M00302 TRANSFAC - 45809415 45809426 7.0E-06 TTGTGGAAAATT 12 V_ZBED6_01_M01598 TRANSFAC + 45810043 45810054 2.0E-06 CGAGCTCGCCTG 12 V_BCL6_Q3_M01171 TRANSFAC + 45809973 45809982 8.0E-06 AGTTCTAGGA 10 V_RFXDC2_03_M02790 TRANSFAC + 45809560 45809574 1.0E-06 TTCCTTAGCAACGAG 15 V_MUSCLE_INI_B_M00321 TRANSFAC + 45809254 45809274 3.0E-06 AGACGCCCACACCCCACAGGC 21 V_SPIB_01_M01204 TRANSFAC - 45809700 45809716 2.0E-06 AAAATAAGGAAGCTGTA 17 V_SP4_04_M02914 TRANSFAC + 45809649 45809663 9.0E-06 TAAAGGCTTGTCTTT 15 V_FOXL1_04_M02753 TRANSFAC - 45809571 45809587 8.0E-06 GAAATGTCAACAACTCG 17 V_NKX3A_02_M01383 TRANSFAC - 45810875 45810891 2.0E-06 TTCAAGGTACTTGAATA 17 V_SMAD3_03_M02794 TRANSFAC + 45810801 45810817 1.0E-06 TTATACCAGACAACACA 17 V_FOXO3_01_M00477 TRANSFAC + 45809572 45809585 5.0E-06 GAGTTGTTGACATT 14 V_FOXA2_03_M02260 TRANSFAC + 45809576 45809587 1.0E-05 TGTTGACATTTC 12 V_PLZF_02_M01075 TRANSFAC + 45809637 45809665 8.0E-06 GGAAAACTGCGCTAAAGGCTTGTCTTTCC 29 V_VMAF_01_M00035 TRANSFAC + 45810837 45810855 5.0E-06 TCAAGCTGACTCAGAGACA 19 V_FOXO1_04_M01969 TRANSFAC + 45809563 45809582 8.0E-06 CTTAGCAACGAGTTGTTGAC 20 V_RFX3_04_M02788 TRANSFAC + 45809556 45809578 1.0E-06 GCCGTTCCTTAGCAACGAGTTGT 23 V_FREAC4_01_M00292 TRANSFAC - 45809572 45809587 7.0E-06 GAAATGTCAACAACTC 16 V_AP2ALPHA_02_M01045 TRANSFAC - 45809751 45809765 4.0E-06 AAAGCCTAAGGGGTT 15 V_MIF1_01_M00279 TRANSFAC - 45809556 45809573 2.0E-06 TCGTTGCTAAGGAACGGC 18 V_MIF1_01_M00279 TRANSFAC + 45809557 45809574 5.0E-06 CCGTTCCTTAGCAACGAG 18 V_FOXK1_03_M02752 TRANSFAC - 45809571 45809587 5.0E-06 GAAATGTCAACAACTCG 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.