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EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
27065 neuron specific gene family member 1 chr4 +4382982 - 4388482 4387982

Transcription Factor Binding Sites

 
Download all TFBS in the promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR + 4390359 4390369 4.0E-06 CCGGAAGTGCT 11
ZNF713_C2H2_full_monomeric_17_1 SELEX + 4390336 4390352 4.0E-06 ACCACCACAGCCACGAA 17
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 4390372 4390383 9.0E-06 AAAATAAATAGA 12
Zfp423_MA0116.1 JASPAR + 4388416 4388430 4.0E-06 GCACCCCTGGGGGTC 15
Zfp423_MA0116.1 JASPAR - 4388550 4388564 8.0E-06 CGCCCCCAGGGGGTC 15
ELF4_ETS_full_monomeric_12_1 SELEX + 4390356 4390367 2.0E-06 TTCCCGGAAGTG 12
KLF14_C2H2_DBD_monomeric_14_1 SELEX + 4388221 4388234 7.0E-06 GGCCGCGCCCCCTT 14
FOXL1_forkhead_full_dimeric_13_1 SELEX - 4390373 4390385 2.0E-06 AGAAAATAAATAG 13
TBX20_TBX_DBD_dimeric_19_1 SELEX + 4390268 4390286 8.0E-06 TACTGTAAAATTCACATCT 19
EWSR1-FLI1_MA0149.1 JASPAR + 4388731 4388748 6.0E-06 GAGAGGCAGGAAGGGAGG 18
EWSR1-FLI1_MA0149.1 JASPAR + 4388735 4388752 4.0E-06 GGCAGGAAGGGAGGCGGC 18
STAT1_MA0137.2 JASPAR + 4390353 4390367 5.0E-06 TAATTCCCGGAAGTG 15
STAT1_MA0137.2 JASPAR - 4390353 4390367 1.0E-05 CACTTCCGGGAATTA 15
TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 4388108 4388118 8.0E-06 TGCCCCAGGCA 11
KLF13_C2H2_full_monomeric_18_1 SELEX + 4388220 4388237 7.0E-06 GGGCCGCGCCCCCTTTAT 18
TBX1_TBX_DBD_dimeric_19_1 SELEX + 4390268 4390286 9.0E-06 TACTGTAAAATTCACATCT 19
TBX1_TBX_DBD_dimeric_19_1 SELEX - 4390268 4390286 8.0E-06 AGATGTGAATTTTACAGTA 19
POU6F2_POU_DBD_dimeric_16_1 SELEX + 4390376 4390391 1.0E-05 TTTATTTTCTCATTTA 16
Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 4390374 4390384 2.0E-06 GAAAATAAATA 11
ELF3_ETS_full_monomeric_13_1 SELEX + 4390356 4390368 7.0E-06 TTCCCGGAAGTGC 13
SP1_MA0079.2 JASPAR - 4389669 4389678 3.0E-06 CCCCTCCCCC 10
FOXI1_MA0042.1 JASPAR + 4390371 4390382 3.0E-06 TTCTATTTATTT 12
CTCF_C2H2_full_monomeric_17_1 SELEX + 4388245 4388261 4.0E-06 CGCGCCCTCTTTTGGTC 17
FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 4390374 4390384 2.0E-06 GAAAATAAATA 11
POU1F1_POU_DBD_monomeric_17_1 SELEX + 4386753 4386769 4.0E-06 CTCATGCATTTTGCATT 17
TBX15_TBX_DBD_dimeric_19_1 SELEX + 4390268 4390286 9.0E-06 TACTGTAAAATTCACATCT 19
EHF_ETS_full_monomeric_12_1 SELEX + 4390356 4390367 5.0E-06 TTCCCGGAAGTG 12
ELF1_ETS_full_monomeric_12_1 SELEX + 4390356 4390367 4.0E-06 TTCCCGGAAGTG 12
ELF3_ETS_DBD_monomeric_12_1 SELEX + 4390356 4390367 3.0E-06 TTCCCGGAAGTG 12
Zfp740_C2H2_DBD_monomeric_10_1 SELEX + 4389490 4389499 1.0E-05 GCCCCCCCAC 10
RUNX1_MA0002.2 JASPAR - 4386814 4386824 2.0E-06 TCCTGTGGTTT 11
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 4390370 4390382 3.0E-06 AAATAAATAGAAA 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 4390374 4390386 1.0E-06 GAGAAAATAAATA 13
V_HNF3B_01_M00131 TRANSFAC + 4390369 4390383 2.0E-06 TTTTCTATTTATTTT 15
V_KLF15_Q2_M01714 TRANSFAC - 4389496 4389509 7.0E-06 GTGGAGGGGCGTGG 14
V_TEL1_02_M02070 TRANSFAC + 4390358 4390367 5.0E-06 CCCGGAAGTG 10
V_STAT3_01_M00225 TRANSFAC + 4390350 4390370 0.0E+00 GAATAATTCCCGGAAGTGCTT 21
V_STAT3_01_M00225 TRANSFAC - 4390350 4390370 2.0E-06 AAGCACTTCCGGGAATTATTC 21
V_DBX1_01_M01483 TRANSFAC - 4390370 4390386 9.0E-06 GAGAAAATAAATAGAAA 17
V_FREAC7_01_M00293 TRANSFAC - 4390370 4390385 8.0E-06 AGAAAATAAATAGAAA 16
V_FLI1_Q6_M01208 TRANSFAC + 4390359 4390369 9.0E-06 CCGGAAGTGCT 11
V_EVI1_04_M00081 TRANSFAC - 4390370 4390384 6.0E-06 GAAAATAAATAGAAA 15
V_NERF_01_M01976 TRANSFAC + 4390358 4390367 9.0E-06 CCCGGAAGTG 10
V_GABP_B_M00341 TRANSFAC + 4390358 4390369 4.0E-06 CCCGGAAGTGCT 12
V_FOXO3A_Q1_M01137 TRANSFAC - 4390374 4390385 4.0E-06 AGAAAATAAATA 12
V_HNF3_Q6_01_M01012 TRANSFAC + 4390369 4390386 0.0E+00 TTTTCTATTTATTTTCTC 18
V_HNF3_Q6_01_M01012 TRANSFAC + 4390373 4390390 2.0E-06 CTATTTATTTTCTCATTT 18
V_STAT5B_01_M00459 TRANSFAC + 4390353 4390367 2.0E-06 TAATTCCCGGAAGTG 15
V_SP1_03_M02281 TRANSFAC - 4389669 4389678 3.0E-06 CCCCTCCCCC 10
V_AREB6_04_M00415 TRANSFAC - 4386824 4386832 8.0E-06 CTGTTTCAT 9
V_BRN2_01_M00145 TRANSFAC - 4386756 4386771 7.0E-06 ACAATGCAAAATGCAT 16
V_NKX62_Q2_M00489 TRANSFAC - 4390372 4390383 4.0E-06 AAAATAAATAGA 12
V_ELF2_02_M02054 TRANSFAC + 4390358 4390367 8.0E-06 CCCGGAAGTG 10
V_RUNX1_01_M02257 TRANSFAC - 4386814 4386824 2.0E-06 TCCTGTGGTTT 11
V_GATA3_05_M02859 TRANSFAC - 4386787 4386808 4.0E-06 CTCTGCTGATTGTATCTGGGCC 22
V_STAT1_01_M00224 TRANSFAC + 4390350 4390370 4.0E-06 GAATAATTCCCGGAAGTGCTT 21
V_STAT1_01_M00224 TRANSFAC - 4390350 4390370 5.0E-06 AAGCACTTCCGGGAATTATTC 21
V_KROX_Q6_M00982 TRANSFAC + 4388130 4388143 8.0E-06 GGCGCCCACACCCC 14
V_KROX_Q6_M00982 TRANSFAC + 4388259 4388272 7.0E-06 GTCGCCCCCTCCCC 14
V_HNF3_Q6_M00791 TRANSFAC - 4390372 4390384 7.0E-06 GAAAATAAATAGA 13
V_STAT5A_02_M00460 TRANSFAC + 4390356 4390379 2.0E-06 TTCCCGGAAGTGCTTTTCTATTTA 24
V_STAT5A_02_M00460 TRANSFAC - 4390356 4390379 6.0E-06 TAAATAGAAAAGCACTTCCGGGAA 24
V_XFD2_01_M00268 TRANSFAC - 4390370 4390383 3.0E-06 AAAATAAATAGAAA 14
V_TEL1_01_M01993 TRANSFAC + 4390358 4390367 5.0E-06 CCCGGAAGTG 10
V_CTCF_02_M01259 TRANSFAC - 4388246 4388265 5.0E-06 GGGCGACCAAAAGAGGGCGC 20
V_ELF4_01_M01979 TRANSFAC + 4390358 4390367 4.0E-06 CCCGGAAGTG 10
V_ZFP187_04_M02934 TRANSFAC + 4386715 4386730 3.0E-06 TTGCCCTTGTCCGTAG 16
V_POU5F1_01_M01307 TRANSFAC - 4386760 4386769 1.0E-06 AATGCAAAAT 10
V_EHF_06_M02745 TRANSFAC + 4390354 4390368 8.0E-06 AATTCCCGGAAGTGC 15
V_CNOT3_01_M01253 TRANSFAC + 4388221 4388230 8.0E-06 GGCCGCGCCC 10
V_STAT_01_M00223 TRANSFAC + 4390356 4390364 7.0E-06 TTCCCGGAA 9
V_FOX_Q2_M00809 TRANSFAC + 4390371 4390383 1.0E-06 TTCTATTTATTTT 13
V_ZFP281_01_M01597 TRANSFAC + 4389668 4389678 7.0E-06 CGGGGGAGGGG 11
V_STAT5A_01_M00457 TRANSFAC + 4390353 4390367 2.0E-06 TAATTCCCGGAAGTG 15
V_STAT5A_01_M00457 TRANSFAC - 4390353 4390367 3.0E-06 CACTTCCGGGAATTA 15
V_HFH3_01_M00289 TRANSFAC + 4390371 4390383 3.0E-06 TTCTATTTATTTT 13
V_EWSR1FLI1_01_M02252 TRANSFAC + 4388731 4388748 6.0E-06 GAGAGGCAGGAAGGGAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC + 4388735 4388752 4.0E-06 GGCAGGAAGGGAGGCGGC 18
V_FOXJ2_01_M00422 TRANSFAC - 4390369 4390386 2.0E-06 GAGAAAATAAATAGAAAA 18
V_ZIC3_04_M02837 TRANSFAC + 4388550 4388564 8.0E-06 GACCCCCTGGGGGCG 15
V_ZIC1_04_M02835 TRANSFAC + 4388550 4388563 3.0E-06 GACCCCCTGGGGGC 14
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 4386814 4386821 1.0E-05 TGTGGTTT 8
V_ELF_02_M02053 TRANSFAC + 4390358 4390367 1.0E-05 CCCGGAAGTG 10
V_UF1H3BETA_Q6_M01068 TRANSFAC + 4389666 4389679 0.0E+00 GGCGGGGGAGGGGA 14
V_TAACC_B_M00331 TRANSFAC + 4386802 4386824 6.0E-06 AGCAGAGGAAGAAAACCACAGGA 23
V_TCF3_05_M02920 TRANSFAC - 4390374 4390388 2.0E-06 ATGAGAAAATAAATA 15
V_ZIC2_04_M02836 TRANSFAC + 4388550 4388564 7.0E-06 GACCCCCTGGGGGCG 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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