Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

TRMT2A


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
27037 tRNA methyltransferase 2 homolog A (S. cerevisiae) chr22 -20104318 - 20109818 20104818

Transcription Factor Binding Sites

 
Download all TFBS in the TRMT2A promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Sox17_MA0078.1 JASPAR - 20104939 20104947 7.0E-06 CTCATTGTC 9
SOX21_HMG_DBD_dimeric_15_1 SELEX + 20104939 20104953 7.0E-06 GACAATGAGAGTGTC 15
Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 20105012 20105025 3.0E-06 GGGGTCAGGGGTCG 14
SRY_HMG_DBD_dimeric_15_1 SELEX - 20104939 20104953 6.0E-06 GACACTCTCATTGTC 15
Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 20106818 20106830 3.0E-06 GGAACGGGTTAAA 13
SOX2_HMG_full_dimeric_17_1 SELEX - 20104938 20104954 9.0E-06 GGACACTCTCATTGTCC 17
E2F7_E2F_DBD_dimeric_14_1 SELEX - 20104912 20104925 0.0E+00 GCTTCCCGCCAAAA 14
E2F8_E2F_DBD_dimeric_12_1 SELEX - 20104913 20104924 1.0E-06 CTTCCCGCCAAA 12
NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 20105012 20105026 4.0E-06 GGGGTCAGGGGTCGA 15
SOX18_HMG_full_dimeric_15_1 SELEX - 20104939 20104953 5.0E-06 GACACTCTCATTGTC 15
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 20105012 20105025 8.0E-06 GGGGTCAGGGGTCG 14
SOX14_HMG_DBD_dimeric_12_1 SELEX - 20104941 20104952 5.0E-06 ACACTCTCATTG 12
Mycn_MA0104.2 JASPAR - 20105247 20105256 8.0E-06 CCCACGTGGC 10
TBX15_TBX_DBD_dimeric_19_1 SELEX - 20106809 20106827 5.0E-06 ACGGGTTAAATTTCCACAT 19
Myf_MA0055.1 JASPAR - 20103590 20103601 2.0E-06 AAGCAGCTGGAG 12
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 20105735 20105745 7.0E-06 GTTCCCCACAG 11
EGR2_C2H2_DBD_monomeric_11_1 SELEX + 20105563 20105573 3.0E-06 TCGCCCACGCA 11
FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 20105732 20105745 1.0E-05 GTTCCCCACAGCAC 14
Sox1_HMG_DBD_dimeric_15_1 SELEX + 20104939 20104953 6.0E-06 GACAATGAGAGTGTC 15
Sox1_HMG_DBD_dimeric_15_1 SELEX - 20104939 20104953 7.0E-06 GACACTCTCATTGTC 15
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 20105012 20105025 9.0E-06 GGGGTCAGGGGTCG 14
V_NFAT_Q4_01_M00935 TRANSFAC + 20106811 20106820 3.0E-06 GTGGAAATTT 10
V_HSF1_Q6_M01023 TRANSFAC + 20104758 20104774 5.0E-06 CTTCTGGCAACGTCATC 17
V_MMEF2_Q6_M00405 TRANSFAC - 20106811 20106826 9.0E-06 CGGGTTAAATTTCCAC 16
V_AP2_Q6_01_M00915 TRANSFAC - 20105400 20105412 0.0E+00 CAGCCCCCAGGCC 13
V_MAF_Q6_M00648 TRANSFAC + 20104501 20104516 5.0E-06 ACAAGGGAAGTGGCCT 16
V_EGR1_02_M01972 TRANSFAC - 20105563 20105573 9.0E-06 TGCGTGGGCGA 11
V_CMYC_02_M01154 TRANSFAC - 20105246 20105257 9.0E-06 GCCCACGTGGCC 12
V_RPC155_01_M01798 TRANSFAC - 20104610 20104625 1.0E-06 TCGCAGGTTCGAGTCC 16
V_TAL1_Q6_M00993 TRANSFAC + 20103591 20103600 3.0E-06 TCCAGCTGCT 10
V_MYF_01_M01302 TRANSFAC - 20103590 20103601 2.0E-06 AAGCAGCTGGAG 12
V_FKLF_Q5_M01837 TRANSFAC - 20104360 20104369 2.0E-06 GGGGTGGGAG 10
V_RXRA_03_M02791 TRANSFAC - 20103634 20103650 7.0E-06 CGTGGTGACCCCTCTAT 17
V_SOX8_04_M02912 TRANSFAC - 20106829 20106842 1.0E-06 AGATTCATGAAAGG 14
V_PAX9_B_M00329 TRANSFAC - 20104861 20104884 1.0E-06 GTCAGCCAGAGGAGCGCGCACTCC 24
V_MAZ_Q6_01_M02023 TRANSFAC + 20105041 20105054 1.0E-05 GGCGGAGGGAAGAG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 20105083 20105096 4.0E-06 CGCGGAGGGAAGGA 14
V_AP2BETA_Q3_M01858 TRANSFAC + 20105395 20105410 3.0E-06 GCAGAGGCCTGGGGGC 16
V_IRF3_06_M02871 TRANSFAC + 20106777 20106790 5.0E-06 AAAGAAAGGGCCTA 14
V_TCF7_03_M02817 TRANSFAC - 20106825 20106841 9.0E-06 GATTCATGAAAGGAACG 17
V_RREB1_01_M00257 TRANSFAC - 20105338 20105351 3.0E-06 CCCCAAACCCCACG 14
V_MYCN_01_M02259 TRANSFAC - 20105247 20105256 8.0E-06 CCCACGTGGC 10
V_SOX17_04_M02904 TRANSFAC - 20106830 20106846 7.0E-06 GTGAAGATTCATGAAAG 17
V_PTF1BETA_Q6_M00657 TRANSFAC - 20104992 20105005 7.0E-06 GGGAAACGCGCCGC 14
V_E2F_03_M00516 TRANSFAC + 20104913 20104924 3.0E-06 TTTGGCGGGAAG 12
V_E2F_Q6_01_M00920 TRANSFAC - 20104912 20104923 2.0E-06 TTCCCGCCAAAA 12
V_CBF_01_M01079 TRANSFAC + 20106805 20106820 3.0E-06 TCCCATGTGGAAATTT 16
V_MYCMAX_B_M00322 TRANSFAC - 20104822 20104831 3.0E-06 GCCACGCGCG 10
V_SMAD3_03_M02794 TRANSFAC - 20105592 20105608 8.0E-06 CGGTTCCAGACGTAAGA 17
V_BDP1_01_M01796 TRANSFAC + 20104610 20104621 4.0E-06 GGACTCGAACCT 12
V_PLZF_02_M01075 TRANSFAC + 20104957 20104985 3.0E-06 CTCCTGAGCCAATAAAGCTGTACTGGTTT 29
V_E2F_Q4_01_M00919 TRANSFAC - 20104912 20104922 2.0E-06 TCCCGCCAAAA 11
V_PIT1_Q6_M00802 TRANSFAC + 20106830 20106847 9.0E-06 CTTTCATGAATCTTCACC 18
V_LPOLYA_B_M00318 TRANSFAC + 20104966 20104973 7.0E-06 CAATAAAG 8
V_ZID_01_M00085 TRANSFAC + 20104741 20104753 5.0E-06 CGTCTCTATGATC 13
V_BRF1_01_M01747 TRANSFAC - 20104609 20104621 1.0E-06 AGGTTCGAGTCCC 13
V_COUP_DR1_Q6_M00765 TRANSFAC - 20105646 20105658 1.0E-05 GGACCTGTGCCCC 13
V_EGR3_01_M00245 TRANSFAC - 20105563 20105574 1.0E-05 CTGCGTGGGCGA 12
V_PPARG_01_M00512 TRANSFAC + 20105009 20105029 1.0E-05 GCTGGGGTCAGGGGTCGAGGT 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL