Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NBEA


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
26960 neurobeachin chr13 +35511423 - 35516923 35516423

Transcription Factor Binding Sites

 
Download all TFBS in the NBEA promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HES5_bHLH_DBD_dimeric_12_1 SELEX - 35516039 35516050 7.0E-06 TGCCACGTGCCT 12
GRHL1_CP2_full_dimeric_12_1 SELEX + 35519029 35519040 6.0E-06 ATAACCAGTTTG 12
GRHL1_CP2_full_dimeric_12_1 SELEX - 35519029 35519040 1.0E-05 CAAACTGGTTAT 12
EWSR1-FLI1_MA0149.1 JASPAR + 35516336 35516353 6.0E-06 GAAGAGAAGGAGGGCAGG 18
Sox1_HMG_DBD_dimeric_13_1 SELEX + 35516511 35516523 6.0E-06 TCAATAGCATCGG 13
HES7_bHLH_DBD_dimeric_12_1 SELEX - 35516039 35516050 8.0E-06 TGCCACGTGCCT 12
SP1_MA0079.2 JASPAR - 35516877 35516886 7.0E-06 CCCCGCCCCC 10
ZIC3_C2H2_full_monomeric_15_1 SELEX - 35516602 35516616 1.0E-05 CGCCCCCCGCGGAGA 15
YY2_C2H2_full_monomeric_11_1 SELEX - 35516438 35516448 4.0E-06 TCCGCCATGTT 11
TBX2_TBX_full_dimeric_18_1 SELEX - 35517476 35517493 7.0E-06 GGTGTTAAGTTGGGCACT 18
RUNX1_MA0002.2 JASPAR - 35516196 35516206 4.0E-06 CCTTGTGGTTT 11
NRF1_NRF_full_dimeric_12_1 SELEX + 35516398 35516409 5.0E-06 TGCGCAGGCGCA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 35516398 35516409 5.0E-06 TGCGCCTGCGCA 12
RREB1_MA0073.1 JASPAR - 35516285 35516304 3.0E-06 CCCCCAACCACCCCGAACGG 20
RREB1_MA0073.1 JASPAR - 35516315 35516334 7.0E-06 CACCCACCCACCCCGACACC 20
GLIS2_C2H2_DBD_monomeric_14_1 SELEX - 35516603 35516616 1.0E-05 CGCCCCCCGCGGAG 14
V_EBF_Q6_M00977 TRANSFAC - 35516185 35516195 8.0E-06 TTCCCTTGAGG 11
V_ATF5_01_M01295 TRANSFAC - 35516170 35516180 4.0E-06 ATTCTCCCTTT 11
V_AML3_Q6_M01856 TRANSFAC + 35516197 35516204 1.0E-05 AACCACAA 8
V_IRF_Q6_01_M00972 TRANSFAC + 35519119 35519129 5.0E-06 GGAAGTGAAAT 11
V_MAF_Q6_M00648 TRANSFAC - 35517425 35517440 8.0E-06 AGGAGGGAGGTGGCGT 16
V_SP1_03_M02281 TRANSFAC - 35516877 35516886 7.0E-06 CCCCGCCCCC 10
V_SP1_02_M01303 TRANSFAC + 35516878 35516888 8.0E-06 GGGGCGGGGGC 11
V_PU1_Q4_M01172 TRANSFAC - 35519113 35519131 0.0E+00 ACATTTCACTTCCTTTCTT 19
V_CMYC_02_M01154 TRANSFAC - 35516039 35516050 7.0E-06 TGCCACGTGCCT 12
V_TAL1_Q6_M00993 TRANSFAC - 35516062 35516071 3.0E-06 TCCAGCTGCT 10
V_RUNX1_01_M02257 TRANSFAC - 35516196 35516206 4.0E-06 CCTTGTGGTTT 11
V_AML2_01_M01759 TRANSFAC + 35516197 35516204 1.0E-05 AACCACAA 8
V_ZBP89_Q4_M01816 TRANSFAC - 35516299 35516308 4.0E-06 CCCTCCCCCA 10
V_SP1_Q6_M00196 TRANSFAC - 35516376 35516388 4.0E-06 GGGGGGCGGAGCC 13
V_SP1_Q6_M00196 TRANSFAC + 35516876 35516888 4.0E-06 GGGGGGCGGGGGC 13
V_SP1SP3_Q4_M01219 TRANSFAC - 35516426 35516436 8.0E-06 CCGCCCCCTGC 11
V_GR_Q6_M00192 TRANSFAC + 35516148 35516166 6.0E-06 CATGCACACTGTGTCCTTC 19
V_GRE_C_M00205 TRANSFAC + 35516150 35516165 1.0E-06 TGCACACTGTGTCCTT 16
V_RREB1_01_M00257 TRANSFAC - 35516290 35516303 4.0E-06 CCCCAACCACCCCG 14
V_SRF_03_M01304 TRANSFAC - 35518022 35518034 6.0E-06 TACCATGAAAGGA 13
V_SRF_03_M01304 TRANSFAC + 35519109 35519121 1.0E-05 GACTAAGAAAGGA 13
V_HNF4A_02_M02868 TRANSFAC - 35519035 35519050 9.0E-06 CTGCAGAGTCCAAACT 16
V_SP4_Q5_M01273 TRANSFAC - 35516877 35516887 5.0E-06 CCCCCGCCCCC 11
V_PTF1BETA_Q6_M00657 TRANSFAC + 35516192 35516205 4.0E-06 GGAAAAACCACAAG 14
V_YY1_03_M02044 TRANSFAC - 35516437 35516448 3.0E-06 TCCGCCATGTTG 12
V_ZIC2_05_M02940 TRANSFAC - 35516687 35516701 6.0E-06 CCGCCCAGCAGGTGT 15
V_TAL1_01_M01591 TRANSFAC - 35516336 35516348 4.0E-06 CCTCCTTCTCTTC 13
V_OCT1_Q6_M00195 TRANSFAC - 35519016 35519030 3.0E-06 ATACATTCAAATCAG 15
V_PLAG1_01_M01778 TRANSFAC + 35516351 35516366 7.0E-06 AGGGCAAAAGAGGGGG 16
V_MAX_04_M02881 TRANSFAC - 35516038 35516051 7.0E-06 GTGCCACGTGCCTT 14
V_ZFP206_01_M01742 TRANSFAC + 35516398 35516408 1.0E-06 TGCGCAGGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 35516399 35516409 8.0E-06 TGCGCCTGCGC 11
V_E47_01_M00002 TRANSFAC - 35516683 35516697 1.0E-06 CCAGCAGGTGTGCCG 15
V_PLZF_02_M01075 TRANSFAC + 35519131 35519159 3.0E-06 TTTCTCTTGAGATAAAAAAGAAATTTAAC 29
V_ZFP281_01_M01597 TRANSFAC + 35516299 35516309 9.0E-06 TGGGGGAGGGA 11
V_EWSR1FLI1_01_M02252 TRANSFAC + 35516336 35516353 6.0E-06 GAAGAGAAGGAGGGCAGG 18
V_VMAF_01_M00035 TRANSFAC - 35519061 35519079 8.0E-06 AAGAACTGATTCAGCACAC 19
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 35516196 35516203 1.0E-05 TGTGGTTT 8
V_DR3_Q4_M00966 TRANSFAC + 35516262 35516282 1.0E-06 CATGCACCTGCTCACCTGTCT 21
V_PIT1_Q6_M00802 TRANSFAC - 35519137 35519154 3.0E-06 ATTTCTTTTTTATCTCAA 18
V_SP1_Q2_01_M00933 TRANSFAC - 35516877 35516886 4.0E-06 CCCCGCCCCC 10
V_UF1H3BETA_Q6_M01068 TRANSFAC + 35516297 35516310 4.0E-06 GTTGGGGGAGGGAC 14
V_SP1_Q4_01_M00932 TRANSFAC - 35516376 35516388 6.0E-06 GGGGGGCGGAGCC 13
V_SP1_Q4_01_M00932 TRANSFAC + 35516876 35516888 8.0E-06 GGGGGGCGGGGGC 13
V_NANOG_02_M01247 TRANSFAC + 35519106 35519125 6.0E-06 GTAGACTAAGAAAGGAAGTG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL