Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GHSR Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2693 growth hormone secretagogue receptor chr3 - 172165746 - 172171246 172166246 Transcription Factor Binding Sites   Download all TFBS in the GHSR promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_14_1 SELEX + 172162736 172162749 6.0E-06 TGAATATGCAGAAA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX + 172162717 172162730 7.0E-06 AATGCAAAATCATA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 172162734 172162747 7.0E-06 TCTGCATATTCACT 14 SOX8_HMG_full_dimeric_17_1 SELEX + 172162724 172162740 3.0E-06 AATCATAGACAGTGAAT 17 SOX8_HMG_DBD_dimeric_14_1 SELEX + 172162736 172162749 5.0E-06 TGAATATGCAGAAA 14 ZNF238_C2H2_full_monomeric_13_1 SELEX + 172162823 172162835 3.0E-06 CTCCCAGATGTTT 13 POU6F2_POU_DBD_dimeric_16_1 SELEX + 172162852 172162867 7.0E-06 CTAATTCCAAAATTAA 16 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 172162734 172162747 2.0E-06 AGTGAATATGCAGA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 172162734 172162747 6.0E-06 TCTGCATATTCACT 14 SOX9_HMG_full_dimeric_16_3 SELEX + 172162735 172162750 4.0E-06 GTGAATATGCAGAAAT 16 SOX7_HMG_full_dimeric_16_1 SELEX - 172162761 172162776 3.0E-06 CACAATTATCAGTGCT 16 EN1_homeodomain_full_dimeric_14_1 SELEX - 172162769 172162782 7.0E-06 TGATCGCACAATTA 14 ELK1_MA0028.1 JASPAR - 172162903 172162912 5.0E-06 AAACCGGAAG 10 REST_MA0138.2 JASPAR + 172167659 172167679 0.0E+00 TTCAGCACTGTGGCCAGCGCC 21 NFE2L2_MA0150.1 JASPAR - 172162944 172162954 6.0E-06 ATGACCTAGCA 11 V_POU3F3_01_M03090 TRANSFAC - 172162735 172162751 8.0E-06 TATTTCTGCATATTCAC 17 V_CEBP_Q3_M00770 TRANSFAC - 172162855 172162866 8.0E-06 TAATTTTGGAAT 12 V_SIX6_02_M01398 TRANSFAC - 172162803 172162819 1.0E-06 AAAAAGATATCATTTGT 17 V_MAFB_03_M02879 TRANSFAC + 172162853 172162867 4.0E-06 TAATTCCAAAATTAA 15 V_OCTAMER_01_M01324 TRANSFAC - 172162735 172162751 8.0E-06 TATTTCTGCATATTCAC 17 V_RP58_01_M00532 TRANSFAC - 172162825 172162836 2.0E-06 GAAACATCTGGG 12 V_ZFP691_03_M02833 TRANSFAC - 172162755 172162771 9.0E-06 TTATCAGTGCTCTCATA 17 V_OCT2_02_M01761 TRANSFAC + 172162736 172162745 1.0E-06 TGAATATGCA 10 V_OCT2_02_M01761 TRANSFAC - 172162736 172162745 2.0E-06 TGCATATTCA 10 V_OCT1_02_M00136 TRANSFAC + 172162735 172162749 0.0E+00 GTGAATATGCAGAAA 15 V_SIX1_01_M01313 TRANSFAC - 172162803 172162819 0.0E+00 AAAAAGATATCATTTGT 17 V_SIX3_01_M01358 TRANSFAC - 172162803 172162819 1.0E-06 AAAAAGATATCATTTGT 17 V_PAX2_01_M00098 TRANSFAC + 172162946 172162964 5.0E-06 CTAGGTCATGTATTAATAC 19 V_REST_01_M01256 TRANSFAC - 172167662 172167683 1.0E-06 ATGTGGCGCTGGCCACAGTGCT 22 V_OCT1_04_M00138 TRANSFAC + 172162710 172162732 1.0E-06 GCAGCAGAATGCAAAATCATAGA 23 V_GATA5_04_M02860 TRANSFAC - 172162804 172162820 0.0E+00 AAAAAAGATATCATTTG 17 V_SIX2_01_M01433 TRANSFAC - 172162803 172162819 2.0E-06 AAAAAGATATCATTTGT 17 V_POU5F1_01_M01307 TRANSFAC + 172162717 172162726 1.0E-06 AATGCAAAAT 10 V_HDX_01_M01333 TRANSFAC + 172162717 172162733 1.0E-06 AATGCAAAATCATAGAC 17 V_NRF2_01_M00108 TRANSFAC - 172162901 172162910 3.0E-06 ACCGGAAGAC 10 V_NRSF_01_M00256 TRANSFAC + 172167659 172167679 0.0E+00 TTCAGCACTGTGGCCAGCGCC 21 V_REST_02_M02256 TRANSFAC + 172167659 172167679 0.0E+00 TTCAGCACTGTGGCCAGCGCC 21 V_SIX6_01_M01345 TRANSFAC - 172162803 172162819 1.0E-06 AAAAAGATATCATTTGT 17 V_PIT1_Q6_M00802 TRANSFAC + 172162717 172162734 3.0E-06 AATGCAAAATCATAGACA 18 V_MEF2_01_M00006 TRANSFAC + 172162856 172162871 2.0E-06 TTCCAAAATTAACCTT 16 V_NFE2L2_01_M02263 TRANSFAC - 172162944 172162954 6.0E-06 ATGACCTAGCA 11 V_HMEF2_Q6_M00406 TRANSFAC + 172162856 172162871 2.0E-06 TTCCAAAATTAACCTT 16 V_CEBPA_Q6_M01866 TRANSFAC - 172162854 172162866 4.0E-06 TAATTTTGGAATT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.