Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GFRA3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
2676 GDNF family receptor alpha 3 chr5 -137609753 - 137615253 137610253

Transcription Factor Binding Sites

 
Download all TFBS in the GFRA3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NFIA_NFI_full_dimeric_15_1 SELEX + 137611194 137611208 7.0E-06 CTGGCAGAGGGCCAG 15
NFIA_NFI_full_dimeric_15_1 SELEX - 137611194 137611208 8.0E-06 CTGGCCCTCTGCCAG 15
BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 137611468 137611484 6.0E-06 CCATTTAAAGTGCATTA 17
NFIX_NFI_full_dimeric_15_2 SELEX - 137611194 137611208 9.0E-06 CTGGCCCTCTGCCAG 15
ZNF238_C2H2_full_monomeric_13_1 SELEX - 137611546 137611558 0.0E+00 TAGCCAGATGTTC 13
TBX1_TBX_DBD_dimeric_19_1 SELEX + 137611341 137611359 9.0E-06 GGGGGTGTAAATCACCCTT 19
TBX1_TBX_DBD_dimeric_19_1 SELEX - 137611341 137611359 9.0E-06 AAGGGTGATTTACACCCCC 19
SP1_MA0079.2 JASPAR - 137610327 137610336 7.0E-06 CCCCGCCCCC 10
NFIB_NFI_full_dimeric_15_1 SELEX + 137611194 137611208 8.0E-06 CTGGCAGAGGGCCAG 15
NFIB_NFI_full_dimeric_15_1 SELEX - 137611194 137611208 1.0E-05 CTGGCCCTCTGCCAG 15
DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 137611304 137611316 8.0E-06 CCGATGTAATCAG 13
Myf_MA0055.1 JASPAR - 137610401 137610412 1.0E-05 AGACAGCAGGTG 12
Mafb_bZIP_DBD_dimeric_18_1 SELEX + 137611300 137611317 8.0E-06 TTTGCCGATGTAATCAGC 18
HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 137611244 137611253 9.0E-06 CCAATAAATC 10
V_FXR_Q3_M00631 TRANSFAC - 137611328 137611341 5.0E-06 CAGCTGGAATGACT 14
V_NF1A_Q6_M02103 TRANSFAC - 137611193 137611208 9.0E-06 CTGGCCCTCTGCCAGG 16
V_EGR_Q6_M00807 TRANSFAC + 137610325 137610335 6.0E-06 GTGGGGGCGGG 11
V_RP58_01_M00532 TRANSFAC + 137611545 137611556 1.0E-06 TGAACATCTGGC 12
V_SP1_03_M02281 TRANSFAC - 137610327 137610336 7.0E-06 CCCCGCCCCC 10
V_ZNF219_01_M01122 TRANSFAC - 137610322 137610333 8.0E-06 CGCCCCCACCCC 12
V_MYF_01_M01302 TRANSFAC - 137610401 137610412 1.0E-05 AGACAGCAGGTG 12
V_GFI1_01_M00250 TRANSFAC - 137611232 137611255 7.0E-06 AGCCAATAAATCTCAGAGGTTTAT 24
V_GATA3_05_M02859 TRANSFAC + 137611299 137611320 6.0E-06 ATTTGCCGATGTAATCAGCCCA 22
V_GATA3_05_M02859 TRANSFAC - 137611300 137611321 7.0E-06 CTGGGCTGATTACATCGGCAAA 22
V_MRF2_01_M00454 TRANSFAC + 137611223 137611236 8.0E-06 AATCGCAATATAAA 14
V_KROX_Q6_M00982 TRANSFAC - 137610322 137610335 0.0E+00 CCCGCCCCCACCCC 14
V_KROX_Q6_M00982 TRANSFAC - 137610328 137610341 4.0E-06 CCCTCCCCCGCCCC 14
V_MAZ_Q6_01_M02023 TRANSFAC - 137611422 137611435 2.0E-06 AAGGGAGGGAAGGG 14
V_TAL1BETAE47_01_M00065 TRANSFAC - 137611544 137611559 9.0E-06 GTAGCCAGATGTTCAC 16
V_MUSCLE_INI_B_M00321 TRANSFAC - 137610316 137610336 9.0E-06 CCCCGCCCCCACCCCCGCGGT 21
V_TAL1BETAITF2_01_M00070 TRANSFAC - 137611544 137611559 7.0E-06 GTAGCCAGATGTTCAC 16
V_NEUROD_02_M01288 TRANSFAC + 137610401 137610412 9.0E-06 CACCTGCTGTCT 12
V_SP4_Q5_M01273 TRANSFAC - 137610327 137610337 5.0E-06 CCCCCGCCCCC 11
V_TAL1_01_M01591 TRANSFAC - 137611388 137611400 6.0E-06 CTTCCTTATCTAG 13
V_TAL1ALPHAE47_01_M00066 TRANSFAC - 137611544 137611559 4.0E-06 GTAGCCAGATGTTCAC 16
V_E47_01_M00002 TRANSFAC - 137610396 137610410 4.0E-06 ACAGCAGGTGGGCCG 15
V_SMAD_Q6_01_M00974 TRANSFAC - 137610407 137610417 4.0E-06 TTGTCAGACAG 11
V_ZFP281_01_M01597 TRANSFAC + 137610326 137610336 6.0E-06 TGGGGGCGGGG 11
V_ZFP281_04_M02831 TRANSFAC - 137610324 137610338 7.0E-06 TCCCCCGCCCCCACC 15
V_YY1_01_M00059 TRANSFAC - 137611473 137611489 6.0E-06 AAACTCCATTTAAAGTG 17
V_CTF1_01_M01196 TRANSFAC + 137611195 137611208 5.0E-06 TGGCAGAGGGCCAG 14
V_SP1_Q2_01_M00933 TRANSFAC - 137610327 137610336 4.0E-06 CCCCGCCCCC 10
V_UF1H3BETA_Q6_M01068 TRANSFAC + 137610330 137610343 2.0E-06 GGCGGGGGAGGGCC 14
TLX1_NFIC_MA0119.1 JASPAR + 137611195 137611208 5.0E-06 TGGCAGAGGGCCAG 14
V_GATA1_06_M00347 TRANSFAC + 137611388 137611397 6.0E-06 CTAGATAAGG 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL