Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GPR110 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 266977 G protein-coupled receptor 110 chr6 - 47009582 - 47015082 47010082 Transcription Factor Binding Sites   Download all TFBS in the GPR110 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 47012278 47012288 3.0E-06 GATGACTCACC 11 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 47011857 47011874 4.0E-06 TTAATAATCTACTAATCA 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 47012187 47012204 2.0E-06 GGAATTAAAAGACTATTA 18 SOX10_HMG_full_dimeric_15_3 SELEX - 47012176 47012190 3.0E-06 ATTAAATGCATTCAT 15 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 47012187 47012203 1.0E-06 GAATTAAAAGACTATTA 17 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 47010124 47010134 7.0E-06 GACACACCCCC 11 POU3F3_POU_DBD_monomeric_12_1 SELEX + 47012249 47012260 3.0E-06 TTTCATAAATAA 12 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 47011848 47011860 5.0E-06 AAAATGGAATTAA 13 ELF4_ETS_full_monomeric_12_1 SELEX - 47012362 47012373 9.0E-06 CACCAGGAAGTA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 47010504 47010516 5.0E-06 CTTAAATAAAAAA 13 SOX9_HMG_full_dimeric_17_3 SELEX - 47012175 47012191 5.0E-06 TATTAAATGCATTCATC 17 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 47012273 47012284 6.0E-06 AAACTGATGACT 12 SOX7_HMG_full_dimeric_17_2 SELEX - 47012175 47012191 8.0E-06 TATTAAATGCATTCATC 17 Pax4_MA0068.1 JASPAR + 47010145 47010174 7.0E-06 AAACAAAATACTTTTCTCCTAACTCCCCCT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 47011191 47011204 3.0E-06 GAAAAGGGGAAGCT 14 POU6F2_POU_DBD_dimeric_16_1 SELEX + 47011857 47011872 7.0E-06 TTAATAATCTACTAAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 47011857 47011872 2.0E-06 ATTAGTAGATTATTAA 16 Sox17_HMG_DBD_dimeric_15_2 SELEX - 47012176 47012190 9.0E-06 ATTAAATGCATTCAT 15 ELF3_ETS_full_monomeric_13_1 SELEX - 47012361 47012373 5.0E-06 CACCAGGAAGTAC 13 ALX3_homeodomain_full_dimeric_13_1 SELEX + 47011848 47011860 1.0E-05 AAAATGGAATTAA 13 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 47011855 47011869 2.0E-06 AATTAATAATCTACT 15 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 47011848 47011860 9.0E-06 AAAATGGAATTAA 13 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 47011848 47011860 5.0E-06 AAAATGGAATTAA 13 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 47010078 47010094 1.0E-06 TGCGTGCCAGGAATTGC 17 SOX14_HMG_DBD_dimeric_15_1 SELEX - 47012176 47012190 8.0E-06 ATTAAATGCATTCAT 15 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 47010505 47010515 3.0E-06 TTAAATAAAAA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 47012273 47012293 6.0E-06 AAACTGATGACTCACCAAAAA 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 47012273 47012293 5.0E-06 TTTTTGGTGAGTCATCAGTTT 21 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 47011857 47011874 7.0E-06 TTAATAATCTACTAATCA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 47012187 47012204 2.0E-06 GGAATTAAAAGACTATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX + 47010422 47010438 5.0E-06 TTCATGCATAATTCCAA 17 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 47011856 47011868 5.0E-06 GTAGATTATTAAT 13 POU3F1_POU_DBD_monomeric_12_2 SELEX + 47010425 47010436 8.0E-06 ATGCATAATTCC 12 POU3F1_POU_DBD_monomeric_12_2 SELEX + 47012249 47012260 1.0E-05 TTTCATAAATAA 12 FEV_MA0156.1 JASPAR - 47012315 47012322 1.0E-05 CAGGAAAT 8 MAFG_bZIP_full_dimeric_21_1 SELEX + 47012273 47012293 1.0E-06 AAACTGATGACTCACCAAAAA 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 47012273 47012293 5.0E-06 TTTTTGGTGAGTCATCAGTTT 21 EHF_ETS_full_monomeric_12_1 SELEX - 47012362 47012373 3.0E-06 CACCAGGAAGTA 12 JDP2_bZIP_full_dimeric_9_1 SELEX + 47012279 47012287 7.0E-06 ATGACTCAC 9 ELF5_ETS_full_monomeric_11_1 SELEX - 47012362 47012372 1.0E-06 ACCAGGAAGTA 11 SOX18_HMG_full_dimeric_15_3 SELEX - 47012176 47012190 5.0E-06 ATTAAATGCATTCAT 15 ELF3_ETS_DBD_monomeric_12_1 SELEX - 47012362 47012373 2.0E-06 CACCAGGAAGTA 12 CPEB1_RRM_full_monomeric_8_1 SELEX - 47010505 47010512 4.0E-06 AATAAAAA 8 SPI1_ETS_full_monomeric_14_1 SELEX + 47011191 47011204 1.0E-06 GAAAAGGGGAAGCT 14 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 47011855 47011869 2.0E-06 AATTAATAATCTACT 15 POU3F3_POU_DBD_dimeric_12_1 SELEX - 47010504 47010515 7.0E-06 TTAAATAAAAAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX + 47011856 47011867 9.0E-06 ATTAATAATCTA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 47011857 47011874 7.0E-06 TTAATAATCTACTAATCA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 47012187 47012204 2.0E-06 GGAATTAAAAGACTATTA 18 HNF1A_MA0046.1 JASPAR + 47011855 47011868 6.0E-06 AATTAATAATCTAC 14 V_ELF5_02_M01980 TRANSFAC - 47012362 47012371 5.0E-06 CCAGGAAGTA 10 V_DMRT4_01_M01149 TRANSFAC + 47010016 47010028 4.0E-06 AAAGTATCAGTAT 13 V_ELF5_03_M02057 TRANSFAC - 47012362 47012371 8.0E-06 CCAGGAAGTA 10 V_CEBPG_Q6_M00622 TRANSFAC + 47010333 47010345 2.0E-06 TTTACTACAAAAT 13 V_CEBPG_Q6_M00622 TRANSFAC - 47012249 47012261 2.0E-06 CTTATTTATGAAA 13 V_TST1_02_M01316 TRANSFAC + 47011851 47011867 9.0E-06 ATGGAATTAATAATCTA 17 V_DBX1_01_M01483 TRANSFAC + 47010505 47010521 7.0E-06 TTTTTATTTAAGACTAA 17 V_DBX1_01_M01483 TRANSFAC - 47011854 47011870 1.0E-06 TAGTAGATTATTAATTC 17 V_FREAC7_01_M00293 TRANSFAC - 47011837 47011852 3.0E-06 ATTTTATAAACACATT 16 V_FREAC7_01_M00293 TRANSFAC + 47012248 47012263 4.0E-06 GTTTCATAAATAAGGT 16 V_CDX2_Q5_01_M01659 TRANSFAC + 47012250 47012260 0.0E+00 TTCATAAATAA 11 V_APOLYA_B_M00310 TRANSFAC - 47012289 47012303 2.0E-06 AGTAAACTGCTTTTT 15 V_FLI1_Q6_M01208 TRANSFAC + 47012216 47012226 7.0E-06 AAGGAAGTCAT 11 V_BACH2_01_M00490 TRANSFAC - 47012278 47012288 1.0E-06 GGTGAGTCATC 11 V_XFD1_01_M00267 TRANSFAC - 47011837 47011850 7.0E-06 TTTATAAACACATT 14 V_XFD1_01_M00267 TRANSFAC + 47012250 47012263 5.0E-06 TTCATAAATAAGGT 14 V_MAFK_03_M02776 TRANSFAC + 47012271 47012285 5.0E-06 TGAAACTGATGACTC 15 V_AHRARNT_01_M00235 TRANSFAC - 47012337 47012352 0.0E+00 TTAGTGTTGCGTGCAC 16 V_FOXD3_01_M00130 TRANSFAC - 47011854 47011865 7.0E-06 GATTATTAATTC 12 V_ESE1_01_M01977 TRANSFAC - 47012362 47012371 8.0E-06 CCAGGAAGTA 10 V_HOXA13_02_M01297 TRANSFAC - 47010505 47010513 4.0E-06 AAATAAAAA 9 V_SATB1_Q3_M01723 TRANSFAC + 47010468 47010483 9.0E-06 AGAAATAAGGGTAGAT 16 V_PROP1_01_M01294 TRANSFAC - 47011849 47011859 6.0E-06 TAATTCCATTT 11 V_IRF2_Q6_M01882 TRANSFAC - 47010486 47010501 1.0E-05 TGGAAAAGGAAAAACA 16 V_NFAT3_Q3_M01734 TRANSFAC + 47010486 47010495 6.0E-06 TGTTTTTCCT 10 V_CEBP_01_M00159 TRANSFAC + 47010005 47010017 7.0E-06 TGTTTGGAAAGAA 13 V_POU1F1_Q6_M00744 TRANSFAC + 47010425 47010434 3.0E-06 ATGCATAATT 10 V_P53_DECAMER_Q2_M00761 TRANSFAC + 47010112 47010121 7.0E-06 AGACAAGCCT 10 V_FOXJ1_03_M02750 TRANSFAC - 47007269 47007284 9.0E-06 ATAGTACACAAAACCA 16 V_FOXJ1_03_M02750 TRANSFAC - 47011835 47011850 3.0E-06 TTTATAAACACATTCT 16 V_PU1_Q4_M01172 TRANSFAC - 47011192 47011210 5.0E-06 CTGACTAGCTTCCCCTTTT 19 V_PU1_Q4_M01172 TRANSFAC - 47012212 47012230 9.0E-06 TACTATGACTTCCTTCTAT 19 V_CDX_Q5_M00991 TRANSFAC - 47012185 47012202 0.0E+00 AATTAAAAGACTATTAAA 18 V_LDSPOLYA_B_M00317 TRANSFAC + 47010482 47010497 1.0E-06 ATACTGTTTTTCCTTT 16 V_TAL1_GATA1_01_M02243 TRANSFAC - 47009934 47009951 0.0E+00 CTGGTGTGAAGAGATAAA 18 V_AP1_Q6_M00174 TRANSFAC + 47012278 47012288 1.0E-05 GATGACTCACC 11 V_ELF4_04_M02850 TRANSFAC - 47010501 47010517 2.0E-06 TCTTAAATAAAAAAGTT 17 V_BACH1_01_M00495 TRANSFAC - 47012276 47012290 7.0E-06 TTGGTGAGTCATCAG 15 V_CRX_Q4_M00623 TRANSFAC - 47011851 47011863 1.0E-06 TTATTAATTCCAT 13 V_HELIOSA_02_M01004 TRANSFAC - 47010488 47010498 0.0E+00 AAAAGGAAAAA 11 V_POU3F2_01_M00463 TRANSFAC + 47012180 47012193 4.0E-06 ATGCATTTAATAGT 14 V_LMX1_01_M01409 TRANSFAC - 47010503 47010519 7.0E-06 AGTCTTAAATAAAAAAG 17 V_ZFP105_03_M02827 TRANSFAC - 47010501 47010515 9.0E-06 TTAAATAAAAAAGTT 15 V_ZFP105_03_M02827 TRANSFAC - 47010502 47010516 6.0E-06 CTTAAATAAAAAAGT 15 V_HNF1_Q6_M00790 TRANSFAC + 47011854 47011871 3.0E-06 GAATTAATAATCTACTAA 18 V_NFAT_Q6_M00302 TRANSFAC - 47010487 47010498 4.0E-06 AAAAGGAAAAAC 12 V_GMEB1_03_M02761 TRANSFAC - 47012223 47012239 1.0E-06 TATTGGACGTACTATGA 17 V_GMEB1_03_M02761 TRANSFAC + 47012224 47012240 9.0E-06 CATAGTACGTCCAATAT 17 V_IRF3_Q3_M01279 TRANSFAC + 47010485 47010497 4.0E-06 CTGTTTTTCCTTT 13 V_HNF1_Q6_01_M01011 TRANSFAC + 47011852 47011872 6.0E-06 TGGAATTAATAATCTACTAAT 21 V_HNF1_Q6_01_M01011 TRANSFAC - 47011852 47011872 5.0E-06 ATTAGTAGATTATTAATTCCA 21 V_EHF_02_M01974 TRANSFAC - 47012362 47012371 3.0E-06 CCAGGAAGTA 10 V_JUNDM2_04_M02876 TRANSFAC + 47012275 47012290 0.0E+00 ACTGATGACTCACCAA 16 V_JUNDM2_04_M02876 TRANSFAC - 47012276 47012291 1.0E-06 TTTGGTGAGTCATCAG 16 Tal1_Gata1_MA0140.1 JASPAR - 47009934 47009951 0.0E+00 CTGGTGTGAAGAGATAAA 18 V_PIT1_01_M01465 TRANSFAC - 47011850 47011866 1.0E-05 AGATTATTAATTCCATT 17 V_PIT1_01_M01465 TRANSFAC + 47011851 47011867 7.0E-06 ATGGAATTAATAATCTA 17 V_SPIB_01_M01204 TRANSFAC + 47011191 47011207 1.0E-06 GAAAAGGGGAAGCTAGT 17 V_NCX_02_M01420 TRANSFAC - 47011851 47011867 4.0E-06 TAGATTATTAATTCCAT 17 V_ARID3A_04_M02735 TRANSFAC - 47010503 47010519 4.0E-06 AGTCTTAAATAAAAAAG 17 V_AP1_01_M00517 TRANSFAC - 47012277 47012289 5.0E-06 TGGTGAGTCATCA 13 V_LHX3b_01_M01971 TRANSFAC + 47011855 47011864 1.0E-05 AATTAATAAT 10 V_BLIMP1_Q6_M01066 TRANSFAC + 47010271 47010286 5.0E-06 ACAGAAGGGAAATGGG 16 V_ISGF4G_04_M02875 TRANSFAC - 47010480 47010493 6.0E-06 GAAAAACAGTATCT 14 V_LIM1_01_M01418 TRANSFAC - 47010503 47010519 3.0E-06 AGTCTTAAATAAAAAAG 17 V_MAF_Q6_01_M00983 TRANSFAC - 47012279 47012289 8.0E-06 TGGTGAGTCAT 11 V_KAISO_01_M01119 TRANSFAC + 47012317 47012326 1.0E-06 TTCCTGCTAA 10 V_IRF7_01_M00453 TRANSFAC - 47010485 47010502 9.0E-06 TTGGAAAAGGAAAAACAG 18 V_EHF_03_M02052 TRANSFAC - 47012362 47012371 5.0E-06 CCAGGAAGTA 10 V_HFH8_01_M00294 TRANSFAC + 47011838 47011850 4.0E-06 ATGTGTTTATAAA 13 V_AP1_Q4_01_M00926 TRANSFAC - 47012279 47012286 1.0E-05 TGAGTCAT 8 V_EHF_06_M02745 TRANSFAC - 47012361 47012375 7.0E-06 CTCACCAGGAAGTAC 15 V_BRN4_01_M01473 TRANSFAC - 47011850 47011866 9.0E-06 AGATTATTAATTCCATT 17 V_BRN4_01_M01473 TRANSFAC + 47011851 47011867 7.0E-06 ATGGAATTAATAATCTA 17 V_FOXL1_02_M02857 TRANSFAC - 47010504 47010519 7.0E-06 AGTCTTAAATAAAAAA 16 V_FOXL1_04_M02753 TRANSFAC - 47011836 47011852 6.0E-06 ATTTTATAAACACATTC 17 V_CBF_01_M01079 TRANSFAC + 47007262 47007277 6.0E-06 TTCTTAGTGGTTTTGT 16 V_PLAG1_01_M01778 TRANSFAC + 47010463 47010478 3.0E-06 GGGGCAGAAATAAGGG 16 V_MYOGNF1_01_M00056 TRANSFAC - 47010422 47010450 8.0E-06 CACCTCTCCTCATTGGAATTATGCATGAA 29 V_GFI1B_01_M01058 TRANSFAC + 47009988 47009999 7.0E-06 TCAATCACTTCT 12 V_HDX_01_M01333 TRANSFAC + 47010260 47010276 5.0E-06 TGTCTGAAATCACAGAA 17 V_TCF7_04_M02921 TRANSFAC - 47011840 47011854 5.0E-06 CCATTTTATAAACAC 15 V_LMX1B_01_M01363 TRANSFAC + 47010503 47010519 7.0E-06 CTTTTTTATTTAAGACT 17 V_FRA1_Q5_M01267 TRANSFAC - 47012279 47012286 1.0E-05 TGAGTCAT 8 V_DOBOX5_01_M01463 TRANSFAC + 47011849 47011865 7.0E-06 AAATGGAATTAATAATC 17 V_ESE1_02_M02055 TRANSFAC - 47012362 47012371 3.0E-06 CCAGGAAGTA 10 V_ETS1_B_M00339 TRANSFAC - 47012357 47012371 1.0E-05 CCAGGAAGTACTGAG 15 V_DMRT2_01_M01147 TRANSFAC - 47012243 47012258 9.0E-06 ATTTATGAAACAATCT 16 V_SRF_06_M02916 TRANSFAC - 47010500 47010516 4.0E-06 CTTAAATAAAAAAGTTG 17 V_SRF_06_M02916 TRANSFAC - 47010501 47010517 4.0E-06 TCTTAAATAAAAAAGTT 17 V_HOXD8_01_M01432 TRANSFAC - 47011851 47011867 5.0E-06 TAGATTATTAATTCCAT 17 V_YY1_01_M00059 TRANSFAC - 47011843 47011859 1.0E-06 TAATTCCATTTTATAAA 17 V_NFE2_01_M00037 TRANSFAC + 47012277 47012287 8.0E-06 TGATGACTCAC 11 V_PIT1_Q6_M00802 TRANSFAC + 47010420 47010437 2.0E-06 CCTTCATGCATAATTCCA 18 V_PIT1_Q6_M00802 TRANSFAC - 47011841 47011858 3.0E-06 AATTCCATTTTATAAACA 18 V_BRN3C_01_M01408 TRANSFAC + 47011852 47011867 8.0E-06 TGGAATTAATAATCTA 16 V_GFI1_Q6_01_M02010 TRANSFAC - 47010265 47010274 1.0E-06 CTGTGATTTC 10 V_HNF1A_01_M02162 TRANSFAC + 47011855 47011868 6.0E-06 AATTAATAATCTAC 14 V_SOX5_04_M02910 TRANSFAC + 47012249 47012263 1.0E-06 TTTCATAAATAAGGT 15 V_ZID_01_M00085 TRANSFAC + 47009984 47009996 1.0E-05 TGGCTCAATCACT 13 V_TCF3_05_M02920 TRANSFAC - 47010505 47010519 4.0E-06 AGTCTTAAATAAAAA 15 V_FEV_01_M02269 TRANSFAC - 47012315 47012322 1.0E-05 CAGGAAAT 8 V_GLIS2_04_M02863 TRANSFAC + 47010504 47010517 4.0E-06 TTTTTTATTTAAGA 14 V_GLIS2_04_M02863 TRANSFAC + 47010511 47010524 1.0E-05 TTTAAGACTAAAGA 14 V_ESE1_Q3_M01214 TRANSFAC - 47012362 47012371 3.0E-06 CCAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.