Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

RGS17 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 26575 regulator of G-protein signaling 17 chr6 - 153451889 - 153457389 153452389 Transcription Factor Binding Sites   Download all TFBS in the RGS17 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX + 153452883 153452893 9.0E-06 GAAGTGTGAAG 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 153452558 153452568 1.0E-05 GCCCCGCCCCC 11 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 153452557 153452570 9.0E-06 GGCCCCGCCCCCTC 14 EWSR1-FLI1_MA0149.1 JASPAR - 153452148 153452165 6.0E-06 GAGGTGAAGGAAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 153452152 153452169 6.0E-06 GGGGGAGGTGAAGGAAGG 18 EOMES_TBX_DBD_monomeric_13_1 SELEX + 153452883 153452895 9.0E-06 GAAGTGTGAAGTT 13 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 153452141 153452156 5.0E-06 CTCCGCCCCCTCCTTC 16 SP1_MA0079.2 JASPAR - 153452411 153452420 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 153452559 153452568 7.0E-06 CCCCGCCCCC 10 ZIC3_C2H2_full_monomeric_15_1 SELEX + 153448348 153448362 2.0E-06 CACCTCCTGCTGTGC 15 SP4_C2H2_full_monomeric_17_1 SELEX + 153452555 153452571 3.0E-06 CCGGCCCCGCCCCCTCC 17 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 153452813 153452829 8.0E-06 CTGTGCCTGGCAGGCCG 17 Tp53_p53l_DBD_dimeric_17_1 SELEX + 153448376 153448392 1.0E-05 ACAAGTCATGGGCTGGT 17 TBX20_TBX_DBD_monomeric_15_1 SELEX + 153452880 153452894 6.0E-06 AAGGAAGTGTGAAGT 15 ETS1_ETS_full_dimeric_18_1 SELEX - 153452852 153452869 7.0E-06 GCAGGGAATGCTTCCTCC 18 NRF1_NRF_full_dimeric_12_1 SELEX + 153452466 153452477 2.0E-06 CGCGCATGCGCC 12 FOXL1_MA0033.1 JASPAR + 153451602 153451609 5.0E-06 TATACATA 8 TBX1_TBX_DBD_dimeric_20_1 SELEX + 153452872 153452891 9.0E-06 GGGGGTTCAAGGAAGTGTGA 20 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 153451191 153451201 1.0E-05 AGCCCGAGGCT 11 ZIC1_C2H2_full_monomeric_14_1 SELEX + 153448348 153448361 4.0E-06 CACCTCCTGCTGTG 14 V_FOXP1_01_M00987 TRANSFAC - 153451603 153451622 8.0E-06 GTGTATGTGTATGTATGTAT 20 V_ZFP410_04_M02936 TRANSFAC - 153451561 153451577 5.0E-06 CTTCCCCTCCCCTTAGT 17 V_SP1_Q6_01_M00931 TRANSFAC - 153452558 153452567 4.0E-06 GGGGCGGGGC 10 V_TBR2_01_M01774 TRANSFAC + 153452884 153452892 1.0E-05 AAGTGTGAA 9 V_SP1_03_M02281 TRANSFAC - 153452411 153452420 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 153452559 153452568 7.0E-06 CCCCGCCCCC 10 V_SP1_02_M01303 TRANSFAC - 153451590 153451600 5.0E-06 GGGGTGGGGGG 11 V_TCFAP2E_04_M02926 TRANSFAC + 153452172 153452185 1.0E-06 ACCTTGAAAAAAAT 14 V_WT1_Q6_01_M02036 TRANSFAC + 153452111 153452120 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC - 153452556 153452569 0.0E+00 AGGGGGCGGGGCCG 14 V_CEBPE_Q6_M01868 TRANSFAC - 153452893 153452906 0.0E+00 AAAACTTGCTTAAC 14 V_SP4_03_M02810 TRANSFAC + 153452139 153452155 5.0E-06 CTCTCCGCCCCCTCCTT 17 V_SP4_03_M02810 TRANSFAC + 153452557 153452573 1.0E-06 GGCCCCGCCCCCTCCCC 17 V_KROX_Q6_M00982 TRANSFAC + 153452560 153452573 0.0E+00 CCCGCCCCCTCCCC 14 V_SP1_Q6_M00196 TRANSFAC - 153452557 153452569 0.0E+00 AGGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 153452433 153452446 3.0E-06 GTGGGCGGGGAGGG 14 V_EGR1_Q6_M01873 TRANSFAC - 153452110 153452119 4.0E-06 GCGGGGGCGG 10 V_SP1SP3_Q4_M01219 TRANSFAC + 153452143 153452153 1.0E-06 CCGCCCCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 153452561 153452571 1.0E-06 CCGCCCCCTCC 11 V_SOX12_04_M02900 TRANSFAC - 153451552 153451567 1.0E-05 CCTTAGTCAAAGGAAA 16 V_ZIC3_05_M02941 TRANSFAC - 153448350 153448364 2.0E-06 CAGCACAGCAGGAGG 15 V_NEUROD_02_M01288 TRANSFAC + 153448351 153448362 2.0E-06 CTCCTGCTGTGC 12 V_ZNF515_01_M01231 TRANSFAC - 153451588 153451597 4.0E-06 GTGGGGGGTC 10 V_SP4_Q5_M01273 TRANSFAC + 153452558 153452568 1.0E-06 GCCCCGCCCCC 11 V_ZIC2_05_M02940 TRANSFAC - 153448350 153448364 2.0E-06 CAGCACAGCAGGAGG 15 V_CNOT3_01_M01253 TRANSFAC - 153452503 153452512 4.0E-06 GGCCGCGCCG 10 V_ZFP206_01_M01742 TRANSFAC + 153452466 153452476 2.0E-06 CGCGCATGCGC 11 V_FPM315_01_M01587 TRANSFAC + 153452417 153452428 1.0E-06 GGGGGAGGAGGG 12 V_NRF1_Q6_M00652 TRANSFAC - 153452466 153452475 4.0E-06 CGCATGCGCG 10 V_ZFP281_01_M01597 TRANSFAC - 153451592 153451602 5.0E-06 AGGGGGTGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 153452410 153452420 3.0E-06 AGGGGGAGGGG 11 V_EGR1_06_M02744 TRANSFAC + 153452142 153452155 7.0E-06 TCCGCCCCCTCCTT 14 V_ZFP281_04_M02831 TRANSFAC + 153452158 153452172 9.0E-06 TTCACCTCCCCCCTA 15 V_ZFP281_04_M02831 TRANSFAC + 153452159 153452173 7.0E-06 TCACCTCCCCCCTAC 15 V_ZFP281_04_M02831 TRANSFAC - 153452408 153452422 0.0E+00 TCCCCCTCCCCCTCC 15 V_SRF_06_M02916 TRANSFAC + 153452173 153452189 6.0E-06 CCTTGAAAAAAATCCAT 17 V_SRF_06_M02916 TRANSFAC + 153452174 153452190 5.0E-06 CTTGAAAAAAATCCATC 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 153452148 153452165 6.0E-06 GAGGTGAAGGAAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 153452152 153452169 6.0E-06 GGGGGAGGTGAAGGAAGG 18 V_SOX15_04_M02903 TRANSFAC - 153452211 153452225 7.0E-06 GTAAATGACATCAAA 15 V_SP1_Q2_01_M00933 TRANSFAC + 153452559 153452568 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 153452557 153452569 0.0E+00 AGGGGGCGGGGCC 13 V_ZIC1_05_M02939 TRANSFAC - 153448350 153448364 1.0E-06 CAGCACAGCAGGAGG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.