Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CERS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 2657 growth differentiation factor 1 chr19 - 19006453 - 19011953 19006953 Transcription Factor Binding Sites   Download all TFBS in the CERS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX + 19006007 19006026 8.0E-06 CTGACCCCAGATAGGCACAA 20 SP3_C2H2_DBD_monomeric_11_1 SELEX + 19006380 19006390 7.0E-06 GCCACACCCCC 11 RFX4_RFX_DBD_dimeric_16_1 SELEX + 19005170 19005185 5.0E-06 AGTTGTCATGGAGACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 19005170 19005185 1.0E-06 TGTCTCCATGACAACT 16 EBF1_EBF_full_dimeric_14_1 SELEX + 19004782 19004795 7.0E-06 AGCCCCATGGGACC 14 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 19006381 19006396 8.0E-06 CCACACCCCCGCATCT 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 19005170 19005185 3.0E-06 AGTTGTCATGGAGACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 19005170 19005185 7.0E-06 TGTCTCCATGACAACT 16 SP1_C2H2_DBD_monomeric_11_1 SELEX + 19006380 19006390 8.0E-06 GCCACACCCCC 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 19005170 19005185 2.0E-06 AGTTGTCATGGAGACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 19005170 19005185 2.0E-06 TGTCTCCATGACAACT 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 19005170 19005185 7.0E-06 TGTCTCCATGACAACT 16 INSM1_MA0155.1 JASPAR - 19005203 19005214 8.0E-06 TGCCAGGGGTTA 12 Myf_MA0055.1 JASPAR + 19005181 19005192 1.0E-05 AGACAGCTGGAG 12 Myf_MA0055.1 JASPAR + 19006693 19006704 4.0E-06 CAGCAGCAGCAG 12 RREB1_MA0073.1 JASPAR - 19005051 19005070 1.0E-06 CACCCACCCACCCACCGCAC 20 RREB1_MA0073.1 JASPAR - 19005055 19005074 3.0E-06 CCGCCACCCACCCACCCACC 20 V_AP2ALPHA_Q6_M01857 TRANSFAC - 19006969 19006979 6.0E-06 CGCCCCCGGCC 11 V_ZNF219_01_M01122 TRANSFAC - 19007044 19007055 6.0E-06 CGCCCCCCAGCC 12 V_GC_01_M00255 TRANSFAC - 19005100 19005113 7.0E-06 CAGGGGTGGGGCTT 14 V_EGR1_01_M00243 TRANSFAC - 19006383 19006394 6.0E-06 ATGCGGGGGTGT 12 V_MYF_01_M01302 TRANSFAC + 19005181 19005192 1.0E-05 AGACAGCTGGAG 12 V_MYF_01_M01302 TRANSFAC + 19006693 19006704 4.0E-06 CAGCAGCAGCAG 12 V_NGFIC_01_M00244 TRANSFAC - 19006383 19006394 8.0E-06 ATGCGGGGGTGT 12 V_MAZ_Q6_01_M02023 TRANSFAC + 19006999 19007012 1.0E-05 GGCGGAGGGGCGGG 14 V_RREB1_01_M00257 TRANSFAC - 19005056 19005069 8.0E-06 ACCCACCCACCCAC 14 V_SMAD4_Q6_M00733 TRANSFAC + 19005174 19005188 1.0E-06 GTCATGGAGACAGCT 15 V_INSM1_01_M02268 TRANSFAC - 19005203 19005214 8.0E-06 TGCCAGGGGTTA 12 V_NEUROD_02_M01288 TRANSFAC - 19005181 19005192 4.0E-06 CTCCAGCTGTCT 12 V_MYOD_Q6_02_M02100 TRANSFAC - 19005181 19005189 8.0E-06 CAGCTGTCT 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.