Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

GC


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
2638 group-specific component (vitamin D binding protein) chr4 -72669258 - 72676237 72669758 V_GC_01_M00255

Transcription Factor Binding Sites

 
Download all TFBS in the GC promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Foxa2_MA0047.2 JASPAR - 72671386 72671397 1.0E-06 TGTTTACTTATG 12
FOXA1_MA0148.1 JASPAR - 72671387 72671397 1.0E-06 TGTTTACTTAT 11
FOXF2_MA0030.1 JASPAR + 72671386 72671399 1.0E-06 CATAAGTAAACAAA 14
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 72671363 72671373 5.0E-06 ATCAAAGGTCA 11
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 72671381 72671397 0.0E+00 GTCAACATAAGTAAACA 17
FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 72671388 72671399 0.0E+00 TAAGTAAACAAA 12
FOXL1_forkhead_full_dimeric_13_1 SELEX + 72671386 72671398 3.0E-06 CATAAGTAAACAA 13
NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 72671360 72671373 3.0E-06 ATGATCAAAGGTCA 14
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 72671388 72671398 1.0E-06 TAAGTAAACAA 11
NR2F1_MA0017.1 JASPAR - 72671360 72671373 0.0E+00 TGACCTTTGATCAT 14
RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 72671367 72671384 6.0E-06 AAGGTCAGCTCCTGGTCA 18
LEF1_HMG_DBD_monomeric_15_1 SELEX + 72671359 72671373 9.0E-06 GATGATCAAAGGTCA 15
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 72671387 72671397 5.0E-06 ATAAGTAAACA 11
NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 72671360 72671374 7.0E-06 ATGATCAAAGGTCAG 15
Tcf7_HMG_DBD_monomeric_12_1 SELEX + 72671359 72671370 4.0E-06 GATGATCAAAGG 12
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 72671387 72671397 2.0E-06 ATAAGTAAACA 11
Foxd3_MA0041.1 JASPAR - 72671389 72671400 3.0E-06 GTTTGTTTACTT 12
HNF4A_MA0114.1 JASPAR + 72671361 72671373 4.0E-06 TGATCAAAGGTCA 13
RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 72671365 72671384 0.0E+00 CAAAGGTCAGCTCCTGGTCA 20
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 72671360 72671373 3.0E-06 ATGATCAAAGGTCA 14
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 72671385 72671397 2.0E-06 ACATAAGTAAACA 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 72671389 72671401 1.0E-06 AAGTAAACAAACC 13
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 72671360 72671373 9.0E-06 ATGATCAAAGGTCA 14
FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 72671388 72671398 2.0E-06 TAAGTAAACAA 11
V_LEF1_04_M02774 TRANSFAC - 72671358 72671374 9.0E-06 CTGACCTTTGATCATCC 17
V_FOXA2_04_M02749 TRANSFAC + 72671386 72671402 0.0E+00 CATAAGTAAACAAACCT 17
V_FOXD3_01_M00130 TRANSFAC - 72671389 72671400 4.0E-06 GTTTGTTTACTT 12
V_FOXO4_02_M00476 TRANSFAC - 72671388 72671401 3.0E-06 GGTTTGTTTACTTA 14
V_NR2F2_03_M02783 TRANSFAC + 72671362 72671377 7.0E-06 GATCAAAGGTCAGCTC 16
V_EAR2_Q2_M01728 TRANSFAC - 72671360 72671373 6.0E-06 TGACCTTTGATCAT 14
V_HNF3_Q6_01_M01012 TRANSFAC - 72671385 72671402 1.0E-06 AGGTTTGTTTACTTATGT 18
V_FOXJ1_03_M02750 TRANSFAC + 72671388 72671403 0.0E+00 TAAGTAAACAAACCTG 16
V_HNF4A_03_M02220 TRANSFAC + 72671361 72671373 4.0E-06 TGATCAAAGGTCA 13
V_HFH4_01_M00742 TRANSFAC - 72671388 72671400 5.0E-06 GTTTGTTTACTTA 13
V_PPAR_DR1_Q2_M00763 TRANSFAC - 72671361 72671373 1.0E-06 TGACCTTTGATCA 13
V_COUPTF_Q6_M01036 TRANSFAC - 72671356 72671378 3.0E-06 GGAGCTGACCTTTGATCATCCAT 23
V_PPARGRXRA_01_M02262 TRANSFAC + 72671359 72671373 8.0E-06 GATGATCAAAGGTCA 15
V_FREAC3_01_M00291 TRANSFAC + 72671386 72671401 1.0E-06 CATAAGTAAACAAACC 16
V_HNF4_01_B_M00411 TRANSFAC + 72671360 72671374 3.0E-06 ATGATCAAAGGTCAG 15
V_COUP_01_M00158 TRANSFAC - 72671360 72671373 0.0E+00 TGACCTTTGATCAT 14
V_XFD3_01_M00269 TRANSFAC + 72671388 72671401 7.0E-06 TAAGTAAACAAACC 14
V_HNF3A_01_M01261 TRANSFAC + 72671389 72671398 1.0E-06 AAGTAAACAA 10
V_HNF3_Q6_M00791 TRANSFAC + 72671387 72671399 1.0E-06 ATAAGTAAACAAA 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC - 72671387 72671397 4.0E-06 TGTTTACTTAT 11
V_PPARG_03_M00528 TRANSFAC + 72671357 72671373 7.0E-06 TGGATGATCAAAGGTCA 17
V_PNR_01_M01650 TRANSFAC + 72671360 72671373 6.0E-06 ATGATCAAAGGTCA 14
V_HNF4A_Q6_01_M02016 TRANSFAC + 72671362 72671376 1.0E-06 GATCAAAGGTCAGCT 15
V_HNF4_DR1_Q3_M00764 TRANSFAC - 72671361 72671373 3.0E-06 TGACCTTTGATCA 13
V_FREAC2_01_M00290 TRANSFAC + 72671386 72671401 1.0E-06 CATAAGTAAACAAACC 16
V_HFH8_01_M00294 TRANSFAC - 72671388 72671400 5.0E-06 GTTTGTTTACTTA 13
V_DR1_Q3_M00762 TRANSFAC + 72671361 72671373 2.0E-06 TGATCAAAGGTCA 13
V_FOXL1_04_M02753 TRANSFAC + 72671386 72671402 0.0E+00 CATAAGTAAACAAACCT 17
V_HNF4_Q6_01_M01031 TRANSFAC + 72671361 72671374 2.0E-06 TGATCAAAGGTCAG 14
V_FOXO3_01_M00477 TRANSFAC - 72671388 72671401 1.0E-06 GGTTTGTTTACTTA 14
V_FOXA2_03_M02260 TRANSFAC - 72671386 72671397 1.0E-06 TGTTTACTTATG 12
V_FOX_Q2_M00809 TRANSFAC - 72671388 72671400 0.0E+00 GTTTGTTTACTTA 13
V_LEF1TCF1_Q4_M00978 TRANSFAC - 72671360 72671370 3.0E-06 CCTTTGATCAT 11
V_RARA_03_M02787 TRANSFAC + 72671362 72671377 3.0E-06 GATCAAAGGTCAGCTC 16
V_NUR77_Q5_M01217 TRANSFAC - 72671365 72671374 7.0E-06 CTGACCTTTG 10
V_HFH3_01_M00289 TRANSFAC - 72671388 72671400 1.0E-06 GTTTGTTTACTTA 13
V_FOXJ2_01_M00422 TRANSFAC + 72671385 72671402 1.0E-06 ACATAAGTAAACAAACCT 18
V_FREAC4_01_M00292 TRANSFAC + 72671386 72671401 0.0E+00 CATAAGTAAACAAACC 16
V_RXRLXRB_01_M01198 TRANSFAC + 72671361 72671373 8.0E-06 TGATCAAAGGTCA 13
V_HNF4_01_M00134 TRANSFAC + 72671358 72671376 7.0E-06 GGATGATCAAAGGTCAGCT 19
V_FOXK1_03_M02752 TRANSFAC + 72671386 72671402 0.0E+00 CATAAGTAAACAAACCT 17
PPARG_RXRA_MA0065.2 JASPAR + 72671359 72671373 8.0E-06 GATGATCAAAGGTCA 15
V_TR4_03_M01782 TRANSFAC + 72671361 72671373 9.0E-06 TGATCAAAGGTCA 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL