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GBX1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
2636 gastrulation brain homeobox 1 chr7 -150864367 - 150869867 150864867 GBX1_homeodomain_DBD_monomeric_10_1
V_GBX1_01_M01371

Transcription Factor Binding Sites

 
Download all TFBS in the GBX1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 150869782 150869800 0.0E+00 CTGCCACCAGAGGGCACCC 19
Pax6_MA0069.1 JASPAR + 150864881 150864894 3.0E-06 ATTACGCTTCATTT 14
Pax4_MA0068.1 JASPAR + 150869678 150869707 7.0E-06 GAAAAAAACAAAGTATTCAAGTCAAAGACC 30
RUNX3_RUNX_full_monomeric_10_1 SELEX + 150869703 150869712 6.0E-06 AGACCACAAA 10
CTCF_C2H2_full_monomeric_17_1 SELEX - 150865474 150865490 1.0E-05 CGCGCCCCCTGTCGGCC 17
CTCF_C2H2_full_monomeric_17_1 SELEX + 150869783 150869799 3.0E-06 GGTGCCCTCTGGTGGCA 17
CTCF_C2H2_full_monomeric_17_1 SELEX + 150869845 150869861 2.0E-06 AGCGCCCCCTGGCGACA 17
PLAG1_MA0163.1 JASPAR + 150865472 150865485 5.0E-06 GGGGCCGACAGGGG 14
Hic1_C2H2_DBD_dimeric_18_1 SELEX + 150869784 150869801 7.0E-06 GTGCCCTCTGGTGGCAGC 18
V_OSF2_Q6_M00731 TRANSFAC + 150869705 150869712 1.0E-05 ACCACAAA 8
V_GATA2_02_M00348 TRANSFAC - 150869593 150869602 8.0E-06 AAAGATAAAA 10
V_GATA3_03_M00351 TRANSFAC - 150869593 150869602 4.0E-06 AAAGATAAAA 10
V_EAR2_Q2_M01728 TRANSFAC - 150869695 150869708 8.0E-06 TGGTCTTTGACTTG 14
V_PU1_Q4_M01172 TRANSFAC + 150864884 150864902 7.0E-06 ACGCTTCATTTCCTCCCTC 19
V_MAZ_Q6_01_M02023 TRANSFAC - 150865535 150865548 8.0E-06 ATAGGAGGAAAGGG 14
V_SP1SP3_Q4_M01219 TRANSFAC - 150864818 150864828 1.0E-06 CCGCCCCCTCC 11
V_SP1SP3_Q4_M01219 TRANSFAC + 150865430 150865440 1.0E-06 CCGCCCCCTCC 11
V_PEBP_Q6_M00984 TRANSFAC + 150869701 150869715 4.0E-06 AAAGACCACAAATCT 15
V_CTCF_02_M01259 TRANSFAC - 150869784 150869803 0.0E+00 CTGCTGCCACCAGAGGGCAC 20
V_CTCF_01_M01200 TRANSFAC - 150869782 150869801 0.0E+00 GCTGCCACCAGAGGGCACCC 20
V_CTCF_01_M01200 TRANSFAC - 150869844 150869863 8.0E-06 ACTGTCGCCAGGGGGCGCTG 20
V_CAAT_01_M00254 TRANSFAC - 150869731 150869742 4.0E-06 TCTGGCCAATGA 12
V_GATA3_02_M00350 TRANSFAC - 150869593 150869602 3.0E-06 AAAGATAAAA 10
V_GATA6_01_M00462 TRANSFAC - 150869593 150869602 3.0E-06 AAAGATAAAA 10
V_SRF_06_M02916 TRANSFAC - 150869590 150869606 6.0E-06 GATTAAAGATAAAATTC 17
V_PAX6_01_M00097 TRANSFAC + 150864877 150864897 2.0E-06 TCAAATTACGCTTCATTTCCT 21
V_AP2_Q3_M00800 TRANSFAC - 150864898 150864913 6.0E-06 GGCGGCGGGCGGAGGG 16
V_GATA1_06_M00347 TRANSFAC - 150869593 150869602 1.0E-05 AAAGATAAAA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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