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PNKD Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25953 paroxysmal nonkinesigenic dyskinesia chr2 + 219130114 - 219135614 219135114 Transcription Factor Binding Sites   Download all TFBS in the PNKD promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 219137561 219137579 4.0E-06 GGTCCACCAGAGGGCGCAT 19 SOX4_HMG_DBD_dimeric_16_1 SELEX + 219135759 219135774 5.0E-06 TAACATTTGCAGTTTC 16 EBF1_EBF_full_dimeric_14_1 SELEX + 219137688 219137701 8.0E-06 AGTCCCTTGGGATG 14 EBF1_EBF_full_dimeric_14_1 SELEX - 219137688 219137701 2.0E-06 CATCCCAAGGGACT 14 SOX8_HMG_DBD_dimeric_16_1 SELEX + 219137642 219137657 7.0E-06 AAAGTTATTGAGTGTT 16 EWSR1-FLI1_MA0149.1 JASPAR + 219134553 219134570 6.0E-06 GGGAGTGGGGGAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 219134561 219134578 6.0E-06 GGGAGGAGGGGAAGAGGG 18 ERG_ETS_full_dimeric_14_1 SELEX - 219135785 219135798 4.0E-06 GAAGGAAATCCGGG 14 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 219137793 219137800 1.0E-05 GCACTTAA 8 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 219134327 219134337 8.0E-06 AGCCTCAGGCC 11 KLF13_C2H2_full_monomeric_18_1 SELEX - 219136298 219136315 6.0E-06 AAGCCACGCCCCGTTGGT 18 Klf4_MA0039.2 JASPAR + 219137712 219137721 1.0E-05 AGGGTGGGGC 10 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 219135756 219135769 4.0E-06 TGCTAACATTTGCA 14 ZNF740_C2H2_full_monomeric_10_1 SELEX - 219134764 219134773 5.0E-06 ACCCCCCCAC 10 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 219135467 219135482 4.0E-06 TGCTCTTTAGAGGTCA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 219135467 219135482 1.0E-06 TGACCTCTAAAGAGCA 16 SP1_MA0079.2 JASPAR - 219134562 219134571 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR + 219134889 219134898 9.0E-06 CCCCTCCTCC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 219136300 219136316 3.0E-06 CAAGCCACGCCCCGTTG 17 CTCF_C2H2_full_monomeric_17_1 SELEX - 219137562 219137578 0.0E+00 TGCGCCCTCTGGTGGAC 17 YY2_C2H2_full_monomeric_11_1 SELEX - 219135256 219135266 8.0E-06 GCCGCCATGTT 11 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 219134457 219134472 7.0E-06 TTCCCATCATCCCCTT 16 TBX20_TBX_full_dimeric_16_1 SELEX + 219134541 219134556 0.0E+00 AAGTGTGAGGGTGGGA 16 Nkx3-2_MA0122.1 JASPAR + 219137793 219137801 1.0E-05 TTAAGTGCA 9 LHX6_homeodomain_full_dimeric_12_1 SELEX - 219137794 219137805 4.0E-06 TGGTTGCACTTA 12 Sox11_HMG_DBD_dimeric_15_1 SELEX + 219135760 219135774 3.0E-06 AACATTTGCAGTTTC 15 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 219134764 219134773 2.0E-06 ACCCCCCCAC 10 Mafb_bZIP_DBD_dimeric_18_1 SELEX + 219135754 219135771 4.0E-06 AGTGCTAACATTTGCAGT 18 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 219135754 219135771 9.0E-06 ACTGCAAATGTTAGCACT 18 IRF3_IRF_full_trimeric_21_1 SELEX - 219134788 219134808 8.0E-06 TGGAGTCCGAATCGGAAAGCG 21 PLAG1_MA0163.1 JASPAR + 219134450 219134463 3.0E-06 GAGGGCCAAGGGGA 14 FLI1_ETS_full_monomeric_14_1 SELEX - 219135785 219135798 4.0E-06 GAAGGAAATCCGGG 14 RREB1_MA0073.1 JASPAR - 219134468 219134487 7.0E-06 CCCTCACACACCCCCTTCCC 20 SOX9_HMG_full_dimeric_17_1 SELEX + 219135759 219135775 7.0E-06 TAACATTTGCAGTTTCA 17 V_KLF15_Q2_M01714 TRANSFAC + 219134555 219134568 7.0E-06 GAGTGGGGGAGGAG 14 V_EBF_Q6_M00977 TRANSFAC + 219137689 219137699 1.0E-06 GTCCCTTGGGA 11 V_FLI1_Q6_M01208 TRANSFAC + 219137084 219137094 0.0E+00 CAGGAAGTGAT 11 V_SMAD3_Q6_01_M01888 TRANSFAC + 219134370 219134382 2.0E-06 AGTCAGACACACC 13 V_FOXA2_04_M02749 TRANSFAC + 219137631 219137647 1.0E-05 CAAAGGCAAATAAAGTT 17 V_NFY_Q6_M00185 TRANSFAC + 219134982 219134992 5.0E-06 TCACCAATCAC 11 V_ZFX_01_M01593 TRANSFAC + 219137806 219137821 9.0E-06 GCCTAGGCCCCGGGCC 16 V_PAX4_03_M00378 TRANSFAC + 219134512 219134523 3.0E-06 AACCCCCACCCC 12 V_COE1_Q6_M01871 TRANSFAC - 219137686 219137699 8.0E-06 TCCCAAGGGACTCA 14 V_EBOX_Q6_01_M01034 TRANSFAC - 219134344 219134353 8.0E-06 CCACATGACC 10 V_EBOX_Q6_01_M01034 TRANSFAC + 219135048 219135057 6.0E-06 CCACCTGACT 10 V_MAFB_03_M02879 TRANSFAC - 219135429 219135443 3.0E-06 ATCTTGCAGAAAAGT 15 V_SRY_02_M00160 TRANSFAC + 219137877 219137888 7.0E-06 TGAAACAATAAA 12 V_AP2_Q6_01_M00915 TRANSFAC - 219134665 219134677 1.0E-05 CGCTCCTCAGGCC 13 V_HNF3_Q6_01_M01012 TRANSFAC - 219137630 219137647 8.0E-06 AACTTTATTTGCCTTTGG 18 V_GABPA_04_M02858 TRANSFAC - 219134454 219134469 5.0E-06 CCATCATCCCCTTGGC 16 V_SP1_03_M02281 TRANSFAC - 219134562 219134571 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC + 219134889 219134898 9.0E-06 CCCCTCCTCC 10 V_NERF_Q2_M00531 TRANSFAC + 219134899 219134916 6.0E-06 CGGCAGGAAGTAGGCGTA 18 V_NERF_Q2_M00531 TRANSFAC + 219137081 219137098 3.0E-06 GGCCAGGAAGTGATGGAG 18 V_ETS_Q4_M00771 TRANSFAC - 219137084 219137095 2.0E-06 CATCACTTCCTG 12 V_SOX13_03_M02797 TRANSFAC + 219137875 219137890 8.0E-06 CTTGAAACAATAAAGA 16 V_GC_01_M00255 TRANSFAC + 219137710 219137723 6.0E-06 AGAGGGTGGGGCTG 14 V_STAF_01_M00262 TRANSFAC - 219134453 219134474 4.0E-06 CCTTCCCATCATCCCCTTGGCC 22 V_POLY_C_M00212 TRANSFAC + 219137638 219137655 3.0E-06 AAATAAAGTTATTGAGTG 18 V_ZBP89_Q4_M01816 TRANSFAC - 219134558 219134567 2.0E-06 TCCTCCCCCA 10 V_MAZ_Q6_01_M02023 TRANSFAC + 219134559 219134572 1.0E-06 GGGGGAGGAGGGGA 14 V_OCT1_04_M00138 TRANSFAC - 219135756 219135778 3.0E-06 TTTTGAAACTGCAAATGTTAGCA 23 V_REX1_03_M01744 TRANSFAC + 219135256 219135267 2.0E-06 AACATGGCGGCG 12 V_TEL2_Q6_M00678 TRANSFAC - 219134902 219134911 1.0E-06 CTACTTCCTG 10 V_TEL2_Q6_M00678 TRANSFAC - 219137084 219137093 4.0E-06 TCACTTCCTG 10 V_RFX_Q6_M00975 TRANSFAC + 219137590 219137598 4.0E-06 CTGTTGCCA 9 V_NCX_02_M01420 TRANSFAC - 219137643 219137659 1.0E-05 TAAACACTCAATAACTT 17 V_SMAD4_Q6_M00733 TRANSFAC - 219134967 219134981 8.0E-06 GGCGGCCAGCCAACC 15 V_SP1_01_M00008 TRANSFAC - 219137605 219137614 7.0E-06 GGGGCAGGGT 10 V_CTCF_02_M01259 TRANSFAC + 219137558 219137577 1.0E-06 TGAGGTCCACCAGAGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 219137560 219137579 2.0E-06 AGGTCCACCAGAGGGCGCAT 20 V_ICSBP_Q6_M00699 TRANSFAC - 219135157 219135168 7.0E-06 GACCAGAAACTA 12 V_KAISO_01_M01119 TRANSFAC - 219135394 219135403 7.0E-06 CTCCTGCTAT 10 V_IRF7_01_M00453 TRANSFAC - 219134786 219134803 8.0E-06 TCCGAATCGGAAAGCGGG 18 V_BCL6B_04_M02844 TRANSFAC - 219136314 219136329 6.0E-06 CTGCCCTCCCCTACAA 16 V_ZFP187_04_M02934 TRANSFAC - 219137664 219137679 7.0E-06 CAGACCTGGTTCCTTT 16 V_TAL1_01_M01591 TRANSFAC - 219134310 219134322 4.0E-06 CATGCTTCTCTCC 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 219134547 219134555 8.0E-06 GAGGGTGGG 9 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 219137711 219137719 8.0E-06 GAGGGTGGG 9 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 219137854 219137862 8.0E-06 GAGGGTGGG 9 V_ZBTB3_03_M02825 TRANSFAC + 219135813 219135829 1.0E-06 AGTCCCACTGCAGTCCT 17 V_ZFP161_04_M02933 TRANSFAC - 219134860 219134873 3.0E-06 GTCGCGCAGAGCTG 14 V_FPM315_01_M01587 TRANSFAC + 219134559 219134570 1.0E-06 GGGGGAGGAGGG 12 V_STAT6_02_M00500 TRANSFAC + 219135789 219135796 1.0E-05 GATTTCCT 8 V_ETS1_B_M00339 TRANSFAC + 219137083 219137097 1.0E-06 CCAGGAAGTGATGGA 15 V_ZFP281_01_M01597 TRANSFAC + 219134558 219134568 9.0E-06 TGGGGGAGGAG 11 V_HSF_Q6_M00641 TRANSFAC - 219136336 219136348 4.0E-06 TTGGAGAAGTTTC 13 V_HSF_Q6_M00641 TRANSFAC + 219136341 219136353 6.0E-06 TTCTCCAAGTTTC 13 V_RARA_03_M02787 TRANSFAC + 219135471 219135486 9.0E-06 CTTTAGAGGTCACCCA 16 V_EWSR1FLI1_01_M02252 TRANSFAC + 219134553 219134570 6.0E-06 GGGAGTGGGGGAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 219134561 219134578 6.0E-06 GGGAGGAGGGGAAGAGGG 18 V_SMAD3_Q6_M00701 TRANSFAC - 219134370 219134378 6.0E-06 TGTCTGACT 9 V_EKLF_Q5_M01874 TRANSFAC - 219137908 219137917 2.0E-06 CCACACCCTG 10 V_LPOLYA_B_M00318 TRANSFAC + 219137882 219137889 7.0E-06 CAATAAAG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.