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TMIE Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 259236 transmembrane inner ear chr3 + 46737822 - 46743322 46742822 Transcription Factor Binding Sites   Download all TFBS in the TMIE promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 46742849 46742864 3.0E-06 ATGAATAAATGATGCT 16 CTCF_MA0139.1 JASPAR + 46746671 46746689 1.0E-06 TGGCCTCCAGGTGTCGCCA 19 SP8_C2H2_DBD_monomeric_12_1 SELEX - 46746614 46746625 3.0E-06 GACACTCCCACT 12 HSF2_HSF_DBD_trimeric_13_1 SELEX + 46742356 46742368 9.0E-06 TTCTGGAACCCTC 13 POU3F3_POU_DBD_monomeric_12_1 SELEX + 46742849 46742860 3.0E-06 ATGAATAAATGA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 46738267 46738278 3.0E-06 GCTAAAATTAGT 12 ESR2_MA0258.1 JASPAR + 46746593 46746610 6.0E-06 CAGGGTCATGTCCACCTG 18 POU3F2_POU_DBD_monomeric_13_1 SELEX + 46742848 46742860 9.0E-06 GATGAATAAATGA 13 RFX4_RFX_DBD_dimeric_16_1 SELEX + 46742495 46742510 0.0E+00 TGTCACCATGGCAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 46742495 46742510 0.0E+00 GGTTGCCATGGTGACA 16 POU3F4_POU_DBD_monomeric_11_1 SELEX + 46742850 46742860 9.0E-06 TGAATAAATGA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 46737959 46737969 1.0E-05 AGCCCCAGGCT 11 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 46738267 46738278 4.0E-06 GCTAAAATTAGT 12 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 46737959 46737969 9.0E-06 AGCCCCAGGCT 11 POU4F3_POU_DBD_monomeric_16_1 SELEX + 46742849 46742864 1.0E-06 ATGAATAAATGATGCT 16 MEF2B_MADS_full_dimeric_12_1 SELEX + 46738267 46738278 3.0E-06 GCTAAAATTAGT 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 46742495 46742510 0.0E+00 TGTCACCATGGCAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 46742495 46742510 0.0E+00 GGTTGCCATGGTGACA 16 MEF2A_MA0052.1 JASPAR - 46738268 46738277 6.0E-06 CTAATTTTAG 10 XBP1_bZIP_DBD_dimeric_14_1 SELEX - 46747674 46747687 9.0E-06 AATGACACGTCCTC 14 NRL_bZIP_DBD_monomeric_11_1 SELEX - 46742591 46742601 6.0E-06 AATCTGCTGAT 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 46742495 46742510 0.0E+00 TGTCACCATGGCAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 46742495 46742510 0.0E+00 GGTTGCCATGGTGACA 16 POU1F1_POU_DBD_monomeric_17_1 SELEX + 46742846 46742862 2.0E-06 AGGATGAATAAATGATG 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 46742495 46742510 0.0E+00 TGTCACCATGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 46742495 46742510 1.0E-06 GGTTGCCATGGTGACA 16 POU3F1_POU_DBD_monomeric_12_2 SELEX + 46742849 46742860 2.0E-06 ATGAATAAATGA 12 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 46737959 46737969 8.0E-06 AGCCCCAGGCT 11 REST_MA0138.2 JASPAR - 46746918 46746938 0.0E+00 CTCAGGACCAAGGCCAGAGAC 21 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 46737959 46737969 6.0E-06 AGCCCCAGGCT 11 POU4F1_POU_DBD_monomeric_14_1 SELEX + 46742849 46742862 0.0E+00 ATGAATAAATGATG 14 Zfx_MA0146.1 JASPAR - 46738019 46738032 0.0E+00 GCAGCCTAGGCCTG 14 V_AP2ALPHA_Q6_M01857 TRANSFAC + 46742759 46742769 9.0E-06 AGCCTGCGGCC 11 V_ZFP187_03_M02830 TRANSFAC - 46738271 46738284 3.0E-06 TCCTGTACTAATTT 14 V_HSF1_Q6_M01023 TRANSFAC + 46746734 46746750 6.0E-06 ACTCTGGGAGAGTCTTC 17 V_GCM_Q2_M00634 TRANSFAC + 46738303 46738314 7.0E-06 CAGACCAGCATT 12 V_YY1_02_M00069 TRANSFAC - 46742968 46742987 9.0E-06 ACCCCGCCATCTTCGTGCCA 20 V_HOXA13_02_M01297 TRANSFAC - 46746703 46746711 9.0E-06 AAATAAAAG 9 V_MEF2_02_M00231 TRANSFAC + 46738261 46738282 2.0E-06 ACAGGAGCTAAAATTAGTACAG 22 V_MEF2_02_M00231 TRANSFAC - 46738263 46738284 9.0E-06 TCCTGTACTAATTTTAGCTCCT 22 V_DR4_Q2_M00965 TRANSFAC + 46747646 46747662 4.0E-06 GGAACTCCACTGAACCA 17 V_EGR_Q6_M00807 TRANSFAC + 46742741 46742751 1.0E-05 GTGGGGGCAGG 11 V_ZFP740_03_M02834 TRANSFAC + 46742520 46742535 1.0E-05 TGCCCCCCCCCCAAAC 16 V_ZFP740_03_M02834 TRANSFAC + 46742521 46742536 6.0E-06 GCCCCCCCCCCAAACT 16 V_ZFP740_03_M02834 TRANSFAC + 46742522 46742537 4.0E-06 CCCCCCCCCCAAACTC 16 V_NKX25_Q6_M02108 TRANSFAC + 46747069 46747079 8.0E-06 CCCACTTCAAG 11 V_POU1F1_Q6_M00744 TRANSFAC + 46742849 46742858 0.0E+00 ATGAATAAAT 10 V_RFX4_03_M02789 TRANSFAC + 46742498 46742512 5.0E-06 CACCATGGCAACCTG 15 V_AP2_Q6_01_M00915 TRANSFAC - 46742759 46742771 9.0E-06 CGGGCCGCAGGCT 13 V_AP2_Q6_01_M00915 TRANSFAC + 46746898 46746910 2.0E-06 CACCCCCCAGGCC 13 V_HTF_01_M00538 TRANSFAC - 46747668 46747691 9.0E-06 GAAAAATGACACGTCCTCGTCCCA 24 V_HELIOSA_01_M01003 TRANSFAC - 46747687 46747697 3.0E-06 CATAGGGAAAA 11 V_PPARGRXRA_01_M02262 TRANSFAC + 46743124 46743138 8.0E-06 CTGGGGGAGAGGGGA 15 V_WT1_Q6_01_M02036 TRANSFAC - 46742813 46742822 4.0E-06 CGCCCCCGCC 10 V_PAX5_02_M00144 TRANSFAC - 46747061 46747088 9.0E-06 AGCCAGGTACTTGAAGTGGGAGGGTGGT 28 V_FKLF_Q5_M01837 TRANSFAC - 46738037 46738046 2.0E-06 GGGGTGGGAG 10 V_BEL1_B_M00312 TRANSFAC - 46742574 46742601 1.0E-06 AATCTGCTGATCTAGGAGGCCCTTCCCA 28 V_SP4_03_M02810 TRANSFAC - 46742782 46742798 1.0E-06 GGGCCCGCCCCCTCCTT 17 V_AP2BETA_Q3_M01858 TRANSFAC - 46746900 46746915 3.0E-06 GGCGAGGCCTGGGGGG 16 V_EGR1_Q6_M01873 TRANSFAC + 46742814 46742823 4.0E-06 GCGGGGGCGG 10 V_NKX25_Q5_M01043 TRANSFAC + 46747068 46747077 6.0E-06 TCCCACTTCA 10 V_MEF2_03_M00232 TRANSFAC + 46738261 46738282 1.0E-06 ACAGGAGCTAAAATTAGTACAG 22 V_XBP1_02_M01770 TRANSFAC - 46747677 46747687 0.0E+00 AATGACACGTC 11 V_REST_01_M01256 TRANSFAC + 46746914 46746935 1.0E-06 CCTTGTCTCTGGCCTTGGTCCT 22 V_HBP1_03_M02762 TRANSFAC + 46742846 46742861 8.0E-06 AGGATGAATAAATGAT 16 V_SP1SP3_Q4_M01219 TRANSFAC - 46742784 46742794 1.0E-06 CCGCCCCCTCC 11 V_MUSCLE_INI_B_M00321 TRANSFAC + 46747737 46747757 1.0E-06 AAAGGCCCACACCCAGGGGCC 21 V_CTCF_02_M01259 TRANSFAC + 46746668 46746687 3.0E-06 TTTTGGCCTCCAGGTGTCGC 20 V_CTCF_01_M01200 TRANSFAC + 46746670 46746689 2.0E-06 TTGGCCTCCAGGTGTCGCCA 20 V_SRF_03_M01304 TRANSFAC + 46738320 46738332 7.0E-06 CACCATGTATGGA 13 V_MAZR_01_M00491 TRANSFAC - 46742519 46742531 9.0E-06 GGGGGGGGGGCAG 13 V_PKNOX2_01_M01411 TRANSFAC + 46742488 46742503 6.0E-06 GAGCGCCTGTCACCAT 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 46746854 46746862 8.0E-06 GAGGGTGGG 9 V_MYOGNF1_01_M00056 TRANSFAC + 46742346 46742374 7.0E-06 TGCTGGCTTCTTCTGGAACCCTCCATAAC 29 V_XBP1_01_M00251 TRANSFAC + 46747672 46747688 1.0E-06 ACGAGGACGTGTCATTT 17 V_NRSF_01_M00256 TRANSFAC - 46746918 46746938 1.0E-06 CTCAGGACCAAGGCCAGAGAC 21 V_REST_02_M02256 TRANSFAC - 46746918 46746938 0.0E+00 CTCAGGACCAAGGCCAGAGAC 21 V_RSRFC4_01_M00026 TRANSFAC + 46738265 46738280 1.0E-05 GAGCTAAAATTAGTAC 16 V_RSRFC4_01_M00026 TRANSFAC - 46738265 46738280 2.0E-06 GTACTAATTTTAGCTC 16 V_T3RBETA_Q6_01_M02119 TRANSFAC + 46737964 46737980 1.0E-06 GGGGCTGATGAGGTCAG 17 V_SRF_Q5_01_M00922 TRANSFAC + 46738322 46738336 1.0E-05 CCATGTATGGAGGGG 15 V_ZFP281_04_M02831 TRANSFAC + 46742520 46742534 5.0E-06 TGCCCCCCCCCCAAA 15 V_EKLF_Q5_M01874 TRANSFAC + 46747743 46747752 5.0E-06 CCACACCCAG 10 V_IRF1_01_M00062 TRANSFAC - 46747679 46747691 5.0E-06 GAAAAATGACACG 13 V_UF1H3BETA_Q6_M01068 TRANSFAC - 46742521 46742534 8.0E-06 TTTGGGGGGGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 46742740 46742753 8.0E-06 GGTGGGGGCAGGGA 14 V_RFX1_02_M00281 TRANSFAC + 46742494 46742511 0.0E+00 CTGTCACCATGGCAACCT 18 PPARG_RXRA_MA0065.2 JASPAR + 46743124 46743138 8.0E-06 CTGGGGGAGAGGGGA 15 V_ESR2_01_M02377 TRANSFAC + 46746593 46746610 6.0E-06 CAGGGTCATGTCCACCTG 18 V_T3RALPHA_Q6_M01724 TRANSFAC + 46737970 46737980 5.0E-06 GATGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.