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COBRA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25920 negative elongation factor complex member B chr9 + 140144758 - 140150258 140149758 Transcription Factor Binding Sites   Download all TFBS in the COBRA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HINFP1_C2H2_full_dimeric_19_1 SELEX - 140149747 140149765 4.0E-06 CCGCACCGCCCAGGTCCGC 19 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 140148709 140148722 6.0E-06 GAGGACAAGGGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 140148709 140148722 5.0E-06 GAGGACAAGGGTCA 14 Klf4_MA0039.2 JASPAR + 140149984 140149993 1.0E-05 TGGGCGTGGC 10 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 140150233 140150250 5.0E-06 TAACCGCAGCCACCGAAA 18 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 140148708 140148722 3.0E-06 GAGGACAAGGGTCAC 15 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 140149980 140149994 5.0E-06 GGCCACGCCCAGGTC 15 ELK1_MA0028.1 JASPAR - 140150150 140150159 5.0E-06 AAGCCGGAAA 10 Nkx3-2_MA0122.1 JASPAR + 140145249 140145257 2.0E-06 TTAAGTGGA 9 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 140150149 140150164 4.0E-06 GCAGAAAGCCGGAAAA 16 ETV6_ETS_full_monomeric_10_1 SELEX + 140149766 140149775 9.0E-06 GGCGGAAGTG 10 NRF1_NRF_full_dimeric_12_1 SELEX - 140149637 140149648 2.0E-06 CGCGCATGCGCC 12 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 140148709 140148722 6.0E-06 GAGGACAAGGGTCA 14 V_SMAD3_Q6_01_M01888 TRANSFAC - 140144890 140144902 9.0E-06 AGGCAGACAGATG 13 V_YY1_02_M00069 TRANSFAC + 140149954 140149973 5.0E-06 CCTCGGCCATGTTCGCGGGG 20 V_LRH1_Q5_01_M02098 TRANSFAC + 140150039 140150049 6.0E-06 GCTCAAGGCCA 11 V_PPAR_DR1_Q2_M00763 TRANSFAC + 140148709 140148721 2.0E-06 TGACCCTTGTCCT 13 V_SP1_02_M01303 TRANSFAC + 140149431 140149441 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC + 140150078 140150088 3.0E-06 GGGGCGGGGGG 11 V_COUPTF_Q6_M01036 TRANSFAC + 140148704 140148726 1.0E-06 TGCTGTGACCCTTGTCCTCCTCT 23 V_PPARGRXRA_01_M02262 TRANSFAC - 140148709 140148723 4.0E-06 GGAGGACAAGGGTCA 15 V_ZNF219_01_M01122 TRANSFAC - 140150079 140150090 7.0E-06 CTCCCCCCGCCC 12 V_NKX31_02_M02782 TRANSFAC - 140145245 140145261 9.0E-06 GATTTCCACTTAAGGGA 17 V_GADP_01_M01258 TRANSFAC - 140150139 140150150 9.0E-06 AACTTCCGGCGC 12 V_MUSCLE_INI_B_M00321 TRANSFAC - 140150219 140150239 7.0E-06 ACCGAAAGCCACCCAGCCGTC 21 V_HNF4_DR1_Q3_M00764 TRANSFAC + 140148709 140148721 1.0E-06 TGACCCTTGTCCT 13 V_SMAD4_Q6_M00733 TRANSFAC - 140144891 140144905 9.0E-06 GCCAGGCAGACAGAT 15 V_CTCF_02_M01259 TRANSFAC - 140149592 140149611 4.0E-06 TTTCTGGCAGAAGAGGGCGG 20 V_SP4_Q5_M01273 TRANSFAC - 140150077 140150087 7.0E-06 CCCCCGCCCCG 11 V_ZFP187_04_M02934 TRANSFAC + 140148709 140148724 7.0E-06 TGACCCTTGTCCTCCT 16 V_T3R_01_M00239 TRANSFAC + 140145684 140145699 2.0E-06 CAGTGAGGTCACAGAG 16 V_DR1_Q3_M00762 TRANSFAC - 140148709 140148721 0.0E+00 AGGACAAGGGTCA 13 V_ZFP206_01_M01742 TRANSFAC - 140149638 140149648 2.0E-06 CGCGCATGCGC 11 V_NRF1_Q6_M00652 TRANSFAC + 140149639 140149648 4.0E-06 CGCATGCGCG 10 V_T3RBETA_Q6_01_M02119 TRANSFAC - 140148715 140148731 7.0E-06 GTGGCAGAGGAGGACAA 17 V_SMAD3_Q6_M00701 TRANSFAC + 140144894 140144902 1.0E-05 TGTCTGCCT 9 V_SP1_Q2_01_M00933 TRANSFAC - 140149430 140149439 7.0E-06 CCCCGCCCCT 10 V_HNF4_01_M00134 TRANSFAC - 140148706 140148724 6.0E-06 AGGAGGACAAGGGTCACAG 19 V_COUP_DR1_Q6_M00765 TRANSFAC + 140148709 140148721 1.0E-06 TGACCCTTGTCCT 13 V_ATATA_B_M00311 TRANSFAC - 140149508 140149517 6.0E-06 GTACATAAGC 10 PPARG_RXRA_MA0065.2 JASPAR - 140148709 140148723 4.0E-06 GGAGGACAAGGGTCA 15 V_PPARG_01_M00512 TRANSFAC - 140148705 140148725 7.0E-06 GAGGAGGACAAGGGTCACAGC 21

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