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LETMD1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25875 LETM1 domain containing 1 chr12 + 51437081 - 51442581 51442081 Transcription Factor Binding Sites   Download all TFBS in the LETMD1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 51445187 51445199 3.0E-06 AAAAACAAAAATA 13 SOX10_HMG_full_dimeric_16_1 SELEX + 51445190 51445205 4.0E-06 AACAAAAATAAGTGTT 16 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 51442675 51442690 8.0E-06 GAAGGTCTTGGGGTCA 16 Tp53_p53l_DBD_dimeric_18_1 SELEX + 51445788 51445805 7.0E-06 GCATGTGATTGAACATGG 18 IRF7_IRF_DBD_dimeric_14_1 SELEX + 51445185 51445198 7.0E-06 TCAAAAACAAAAAT 14 SOX9_HMG_full_dimeric_16_1 SELEX + 51445190 51445205 3.0E-06 AACAAAAATAAGTGTT 16 ESR2_MA0258.1 JASPAR + 51441844 51441861 1.0E-06 CAAGGACAGGGTGCCCTC 18 SOX8_HMG_DBD_dimeric_16_1 SELEX + 51445190 51445205 7.0E-06 AACAAAAATAAGTGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX + 51445190 51445205 5.0E-06 AACAAAAATAAGTGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 51445190 51445205 4.0E-06 AACACTTATTTTTGTT 16 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 51441710 51441720 5.0E-06 AGCCCCAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 51441710 51441720 6.0E-06 AGCCCCAGGCA 11 IRF7_IRF_DBD_trimeric_17_1 SELEX + 51441530 51441546 8.0E-06 TTAACGAAAACCATTTT 17 ZNF238_C2H2_full_monomeric_13_1 SELEX + 51445876 51445888 4.0E-06 ATTGCAGATGTTA 13 TCF7L1_HMG_full_monomeric_12_1 SELEX - 51442798 51442809 1.0E-06 GAAGATCAAAGA 12 MYBL1_MYB_DBD_dimeric_12_2 SELEX + 51442084 51442095 5.0E-06 ACGGTTAACTTT 12 MYBL1_MYB_DBD_dimeric_12_2 SELEX - 51442084 51442095 7.0E-06 AAAGTTAACCGT 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 51442795 51442809 0.0E+00 GAAGATCAAAGAGAC 15 Tcfcp2l1_MA0145.1 JASPAR - 51442001 51442014 4.0E-06 CCAGCACAAGCCAG 14 Ar_MA0007.1 JASPAR + 51445840 51445861 6.0E-06 AACATCACACTCTGTCCTCTAC 22 ESR1_MA0112.2 JASPAR - 51441846 51441865 4.0E-06 CGCGGAGGGCACCCTGTCCT 20 CTCF_C2H2_full_monomeric_17_1 SELEX - 51441681 51441697 2.0E-06 GGCGCCCTCTAATGGTG 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 51442798 51442809 0.0E+00 GAAGATCAAAGA 12 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 51442088 51442101 5.0E-06 TGGGTCAAAGTTAA 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 51445187 51445197 8.0E-06 AAAAACAAAAA 11 SOX7_HMG_full_dimeric_16_1 SELEX + 51445190 51445205 1.0E-06 AACAAAAATAAGTGTT 16 SOX7_HMG_full_dimeric_16_1 SELEX - 51445190 51445205 7.0E-06 AACACTTATTTTTGTT 16 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 51442674 51442689 3.0E-06 AAGGTCTTGGGGTCAA 16 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 51442147 51442161 7.0E-06 AGCACACCCTGGAGA 15 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 51441710 51441720 6.0E-06 AGCCCCAGGCA 11 HNF4A_MA0114.1 JASPAR - 51442088 51442100 4.0E-06 GGGTCAAAGTTAA 13 SOX21_HMG_DBD_dimeric_16_1 SELEX + 51445190 51445205 4.0E-06 AACAAAAATAAGTGTT 16 ELF1_ETS_full_monomeric_12_1 SELEX + 51441932 51441943 3.0E-06 AACCTGGAAGTA 12 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 51442088 51442101 4.0E-06 TGGGTCAAAGTTAA 14 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 51442088 51442101 6.0E-06 TGGGTCAAAGTTAA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 51445187 51445199 0.0E+00 AAAAACAAAAATA 13 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 51441710 51441720 6.0E-06 AGCCCCAGGCA 11 RORA_2_MA0072.1 JASPAR - 51442094 51442107 8.0E-06 TGTCTTTGGGTCAA 14 ZNF784_C2H2_full_monomeric_10_1 SELEX - 51441520 51441529 9.0E-06 GCACCTACCG 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 51445187 51445200 9.0E-06 AAAAACAAAAATAA 14 V_FOXP1_01_M00987 TRANSFAC - 51445181 51445200 0.0E+00 TTATTTTTGTTTTTGAGATG 20 V_TCF3_01_M01594 TRANSFAC - 51445185 51445197 8.0E-06 TTTTTGTTTTTGA 13 V_LEF1_04_M02774 TRANSFAC + 51442794 51442810 0.0E+00 AGTCTCTTTGATCTTCC 17 V_E2F4_Q6_M02090 TRANSFAC - 51442114 51442123 1.0E-05 GCGGGAGAGA 10 V_TCFE2A_04_M02927 TRANSFAC + 51445875 51445891 4.0E-06 GATTGCAGATGTTATGG 17 V_NF1_Q6_01_M00806 TRANSFAC + 51445888 51445904 2.0E-06 ATGGGCTGATGCCAAAA 17 V_ESR1_01_M02261 TRANSFAC - 51441846 51441865 4.0E-06 CGCGGAGGGCACCCTGTCCT 20 V_STAT_Q6_M00777 TRANSFAC - 51441478 51441490 8.0E-06 TACTATTCTGAGA 13 V_TCF4_Q5_01_M02033 TRANSFAC - 51442796 51442805 7.0E-06 ATCAAAGAGA 10 V_SRY_02_M00160 TRANSFAC + 51445187 51445198 5.0E-06 AAAAACAAAAAT 12 V_NFAT3_Q3_M01734 TRANSFAC - 51441579 51441588 6.0E-06 ACTTTTTCCT 10 V_EAR2_Q2_M01728 TRANSFAC + 51442088 51442101 1.0E-05 TTAACTTTGACCCA 14 V_GABPA_04_M02858 TRANSFAC + 51441540 51441555 7.0E-06 CCATTTTCCCACAAAC 16 V_HNF4A_03_M02220 TRANSFAC - 51442088 51442100 4.0E-06 GGGTCAAAGTTAA 13 V_GM497_04_M02864 TRANSFAC - 51438847 51438862 5.0E-06 ACACGCACACACACAC 16 V_GM497_04_M02864 TRANSFAC - 51438867 51438882 8.0E-06 ACACACACACACGCGC 16 V_CDX_Q5_M00991 TRANSFAC - 51445747 51445764 3.0E-06 GATACTCAAAGCTTTAAA 18 V_PPARGRXRA_01_M02262 TRANSFAC - 51442088 51442102 9.0E-06 TTGGGTCAAAGTTAA 15 V_NFY_C_M00209 TRANSFAC - 51442030 51442043 3.0E-06 GCTGATTGGTAGCC 14 V_ELF4_04_M02850 TRANSFAC + 51445183 51445199 5.0E-06 TCTCAAAAACAAAAATA 17 V_HMBOX1_01_M01456 TRANSFAC - 51445735 51445751 7.0E-06 TTAAACTAGGTAACTTG 17 V_TCF3_04_M02816 TRANSFAC - 51442794 51442810 3.0E-06 GGAAGATCAAAGAGACT 17 V_ZFP105_03_M02827 TRANSFAC + 51445183 51445197 8.0E-06 TCTCAAAAACAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 51445186 51445200 0.0E+00 CAAAAACAAAAATAA 15 V_RXRA_03_M02791 TRANSFAC + 51442670 51442686 3.0E-06 CTTCTTGACCCCAAGAC 17 V_HNF4_01_B_M00411 TRANSFAC - 51442087 51442101 3.0E-06 TGGGTCAAAGTTAAC 15 V_HNF3_Q6_M00791 TRANSFAC + 51445187 51445199 4.0E-06 AAAAACAAAAATA 13 V_HNF1_Q6_01_M01011 TRANSFAC + 51445816 51445836 5.0E-06 TGTGGTTAAGATTTAAACTGG 21 V_REST_01_M01256 TRANSFAC + 51442138 51442159 6.0E-06 AGATGGCGCTCTCCAGGGTGTG 22 V_REX1_03_M01744 TRANSFAC + 51439514 51439525 6.0E-06 AAGATGGCTGGG 12 V_BBX_04_M02843 TRANSFAC - 51442868 51442884 7.0E-06 TCTTGGTTACCACATAA 17 V_TCF7_03_M02817 TRANSFAC - 51442794 51442810 2.0E-06 GGAAGATCAAAGAGACT 17 V_HNF4A_Q6_01_M02016 TRANSFAC - 51442085 51442099 6.0E-06 GGTCAAAGTTAACCG 15 V_ISGF3G_03_M02771 TRANSFAC + 51445186 51445200 7.0E-06 CAAAAACAAAAATAA 15 V_FOXO1_Q5_M01216 TRANSFAC + 51445187 51445195 1.0E-06 AAAAACAAA 9 V_GATA4_Q3_M00632 TRANSFAC - 51442796 51442807 4.0E-06 AGATCAAAGAGA 12 V_NFYC_Q5_M02107 TRANSFAC + 51442032 51442045 2.0E-06 CTACCAATCAGCGC 14 V_OSR2_04_M02889 TRANSFAC + 51439502 51439517 6.0E-06 AGAAGCTACCTGAAGA 16 V_OSR2_04_M02889 TRANSFAC + 51441734 51441749 7.0E-06 ATCTGCTACCTAACAG 16 V_DR1_Q3_M00762 TRANSFAC - 51442088 51442100 9.0E-06 GGGTCAAAGTTAA 13 V_T3R_Q6_M00963 TRANSFAC - 51441845 51441853 7.0E-06 CCTGTCCTT 9 V_LMO2COM_02_M00278 TRANSFAC + 51441454 51441462 7.0E-06 CAGATAGGG 9 V_PLZF_02_M01075 TRANSFAC - 51445814 51445842 9.0E-06 GTTATCCCAGTTTAAATCTTAACCACAGC 29 V_OSR1_04_M02888 TRANSFAC + 51439502 51439517 4.0E-06 AGAAGCTACCTGAAGA 16 V_OSR1_04_M02888 TRANSFAC + 51441734 51441749 1.0E-06 ATCTGCTACCTAACAG 16 V_DMRT2_01_M01147 TRANSFAC + 51441482 51441497 6.0E-06 AGAATAGTAACATTTA 16 V_SRF_06_M02916 TRANSFAC + 51445184 51445200 4.0E-06 CTCAAAAACAAAAATAA 17 V_RFX3_05_M02892 TRANSFAC - 51442868 51442890 0.0E+00 CTTTTGTCTTGGTTACCACATAA 23 V_FOXO1_01_M00473 TRANSFAC + 51445186 51445195 4.0E-06 CAAAAACAAA 10 V_SOX2_Q6_M01272 TRANSFAC - 51445186 51445201 9.0E-06 CTTATTTTTGTTTTTG 16 V_IRF1_01_M00062 TRANSFAC + 51445186 51445198 6.0E-06 CAAAAACAAAAAT 13 V_RXRLXRB_01_M01198 TRANSFAC - 51442088 51442100 3.0E-06 GGGTCAAAGTTAA 13 V_NFYA_Q5_M02106 TRANSFAC + 51442032 51442045 1.0E-05 CTACCAATCAGCGC 14 V_TCFAP2E_03_M02822 TRANSFAC - 51441708 51441722 4.0E-06 AGTGCCTGGGGCTAG 15 V_ZID_01_M00085 TRANSFAC - 51442007 51442019 8.0E-06 TGGCTCCAGCACA 13 V_SMAD1_01_M01590 TRANSFAC + 51445187 51445198 7.0E-06 AAAAACAAAAAT 12 PPARG_RXRA_MA0065.2 JASPAR - 51442088 51442102 9.0E-06 TTGGGTCAAAGTTAA 15 V_ESR2_01_M02377 TRANSFAC + 51441844 51441861 1.0E-06 CAAGGACAGGGTGCCCTC 18 V_NF1_Q6_M00193 TRANSFAC - 51445887 51445904 4.0E-06 TTTTGGCATCAGCCCATA 18 V_NANOG_02_M01247 TRANSFAC + 51445183 51445202 2.0E-06 TCTCAAAAACAAAAATAAGT 20 V_PPARG_01_M00512 TRANSFAC - 51442084 51442104 2.0E-06 CTTTGGGTCAAAGTTAACCGT 21 V_ER_Q6_M00191 TRANSFAC + 51442084 51442102 0.0E+00 ACGGTTAACTTTGACCCAA 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.