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SAMM50 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25813 sorting and assembly machinery component 50 homolog (S. cerevisiae) chr22 + 44346260 - 44351760 44351260 Transcription Factor Binding Sites   Download all TFBS in the SAMM50 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX - 44353912 44353922 8.0E-06 GGTGACTCATG 11 CTCF_MA0139.1 JASPAR - 44353065 44353083 8.0E-06 TTGCCGCCAGGAGTCACTA 19 SOX21_HMG_DBD_dimeric_15_1 SELEX + 44353133 44353147 5.0E-06 AACAATGGCATGATT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 44353132 44353147 1.0E-06 AAACAATGGCATGATT 16 SPIC_ETS_full_monomeric_14_1 SELEX - 44350473 44350486 5.0E-06 GAAAAGAGGAAGCT 14 SPIC_ETS_full_monomeric_14_1 SELEX - 44351961 44351974 0.0E+00 TAAAACAGGAAGTA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 44352007 44352023 7.0E-06 GGCTTAAAAGAGAATTA 17 SRY_HMG_DBD_dimeric_15_1 SELEX + 44353133 44353147 3.0E-06 AACAATGGCATGATT 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 44353133 44353147 2.0E-06 AATCATGCCATTGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX + 44353132 44353148 3.0E-06 AAACAATGGCATGATTC 17 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 44351694 44351704 2.0E-06 GCTAAAGGTCA 11 ELF4_ETS_full_monomeric_12_1 SELEX - 44351961 44351972 4.0E-06 AAACAGGAAGTA 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 44350370 44350378 9.0E-06 TATTTAAAT 9 SOX9_HMG_DBD_monomeric_9_1 SELEX + 44353132 44353140 9.0E-06 AAACAATGG 9 NFYA_MA0060.1 JASPAR + 44351254 44351269 8.0E-06 AAGGACCAATGAGCGA 16 Sox17_HMG_DBD_dimeric_15_1 SELEX + 44353133 44353147 3.0E-06 AACAATGGCATGATT 15 SPIB_ETS_DBD_monomeric_14_1 SELEX - 44350473 44350486 1.0E-06 GAAAAGAGGAAGCT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX - 44351961 44351974 0.0E+00 TAAAACAGGAAGTA 14 TCF7L1_HMG_full_monomeric_12_1 SELEX - 44351877 44351888 4.0E-06 AGACTTCAAAGG 12 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 44351511 44351529 1.0E-05 CCTCTGGGCCAGCAGGGCA 19 LEF1_HMG_DBD_monomeric_15_1 SELEX - 44351874 44351888 3.0E-06 AGACTTCAAAGGATT 15 ETV2_ETS_DBD_monomeric_11_1 SELEX - 44351961 44351971 8.0E-06 AACAGGAAGTA 11 ELF3_ETS_full_monomeric_13_1 SELEX - 44351960 44351972 3.0E-06 AAACAGGAAGTAA 13 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 44351052 44351065 2.0E-06 CCAACAGCTGGTCT 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 44351052 44351065 4.0E-06 AGACCAGCTGTTGG 14 SOX18_HMG_full_dimeric_15_1 SELEX + 44353133 44353147 4.0E-06 AACAATGGCATGATT 15 SOX18_HMG_full_dimeric_15_1 SELEX - 44353133 44353147 6.0E-06 AATCATGCCATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX - 44353133 44353147 6.0E-06 AATCATGCCATTGTT 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 44351877 44351888 6.0E-06 AGACTTCAAAGG 12 SOX7_HMG_full_dimeric_17_1 SELEX + 44353132 44353148 1.0E-06 AAACAATGGCATGATTC 17 SOX7_HMG_full_dimeric_17_1 SELEX - 44353132 44353148 9.0E-06 GAATCATGCCATTGTTT 17 ERF_ETS_DBD_monomeric_10_1 SELEX - 44351961 44351970 1.0E-05 ACAGGAAGTA 10 EHF_ETS_full_monomeric_12_1 SELEX - 44351961 44351972 4.0E-06 AAACAGGAAGTA 12 JDP2_bZIP_full_dimeric_9_1 SELEX + 44353913 44353921 1.0E-05 ATGAGTCAC 9 TFAP4_bHLH_full_dimeric_10_1 SELEX + 44351054 44351063 7.0E-06 AACAGCTGGT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 44351054 44351063 4.0E-06 ACCAGCTGTT 10 ELF5_ETS_full_monomeric_11_1 SELEX - 44351961 44351971 1.0E-06 AACAGGAAGTA 11 ELF3_ETS_DBD_monomeric_12_1 SELEX - 44351961 44351972 4.0E-06 AAACAGGAAGTA 12 Sox11_HMG_DBD_dimeric_15_1 SELEX + 44353133 44353147 8.0E-06 AACAATGGCATGATT 15 SPDEF_ETS_full_monomeric_11_1 SELEX - 44351232 44351242 2.0E-06 ACCCGGATGTT 11 SOX9_MA0077.1 JASPAR + 44353132 44353140 2.0E-06 AAACAATGG 9 SPI1_ETS_full_monomeric_14_1 SELEX - 44350473 44350486 1.0E-06 GAAAAGAGGAAGCT 14 SPI1_ETS_full_monomeric_14_1 SELEX - 44351961 44351974 0.0E+00 TAAAACAGGAAGTA 14 PLAG1_MA0163.1 JASPAR + 44351586 44351599 7.0E-06 GGGTGCCAAGGGTG 14 Sox3_HMG_DBD_dimeric_17_1 SELEX + 44353132 44353148 7.0E-06 AAACAATGGCATGATTC 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 44353132 44353148 3.0E-06 GAATCATGCCATTGTTT 17 MSC_bHLH_full_dimeric_10_1 SELEX + 44351054 44351063 9.0E-06 AACAGCTGGT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 44351054 44351063 3.0E-06 ACCAGCTGTT 10 ZNF784_C2H2_full_monomeric_10_1 SELEX + 44351992 44352001 1.0E-06 GTACCTACCT 10 SOX9_HMG_full_dimeric_17_1 SELEX + 44353132 44353148 8.0E-06 AAACAATGGCATGATTC 17 V_CEBPG_Q6_M00622 TRANSFAC - 44352102 44352114 2.0E-06 CTTATTTAAGATT 13 V_SPI1_01_M01203 TRANSFAC - 44351958 44351974 0.0E+00 TAAAACAGGAAGTAAGG 17 V_ELK1_04_M01165 TRANSFAC - 44351961 44351971 9.0E-06 AACAGGAAGTA 11 V_IPF1_02_M01234 TRANSFAC + 44352119 44352128 7.0E-06 AGATAATGAG 10 V_TCF3_01_M01594 TRANSFAC + 44350481 44350493 5.0E-06 CTTTTCTTATTCT 13 V_LEF1_04_M02774 TRANSFAC + 44351873 44351889 4.0E-06 GAATCCTTTGAAGTCTT 17 V_FLI1_Q6_M01208 TRANSFAC - 44351959 44351969 8.0E-06 CAGGAAGTAAG 11 V_BACH2_01_M00490 TRANSFAC + 44353912 44353922 2.0E-06 CATGAGTCACC 11 TAL1_TCF3_MA0091.1 JASPAR + 44351052 44351063 7.0E-06 CCAACAGCTGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 44351054 44351065 2.0E-06 AGACCAGCTGTT 12 V_EVI1_04_M00081 TRANSFAC - 44350483 44350497 2.0E-06 AGACAGAATAAGAAA 15 V_ERR3_Q2_01_M02094 TRANSFAC + 44351694 44351706 3.0E-06 GCTAAAGGTCACT 13 V_SPIB_02_M02041 TRANSFAC - 44351961 44351970 3.0E-06 ACAGGAAGTA 10 V_AP4_Q6_M00176 TRANSFAC + 44351054 44351063 8.0E-06 AACAGCTGGT 10 V_POU3F2_02_M00464 TRANSFAC + 44352095 44352104 1.0E-05 TTATCCTAAT 10 V_EAR2_Q2_M01728 TRANSFAC - 44353048 44353061 1.0E-05 TGTTCTTTGCTTTG 14 V_OCT_C_M00210 TRANSFAC + 44351774 44351786 8.0E-06 TTTCTTTGCATGA 13 V_AREB6_04_M00415 TRANSFAC - 44353016 44353024 8.0E-06 CTGTTTCAT 9 V_PPAR_DR1_Q2_M00763 TRANSFAC - 44351692 44351704 4.0E-06 TGACCTTTAGCCA 13 V_COUPTF_Q6_M01036 TRANSFAC - 44351687 44351709 3.0E-06 CCGAGTGACCTTTAGCCAAGTCT 23 V_PU1_Q4_M01172 TRANSFAC + 44350467 44350485 5.0E-06 TACTGAAGCTTCCTCTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 44351955 44351973 0.0E+00 CTGCCTTACTTCCTGTTTT 19 V_CETS1P54_02_M00074 TRANSFAC - 44351960 44351972 2.0E-06 AAACAGGAAGTAA 13 V_PPARGRXRA_01_M02262 TRANSFAC + 44351690 44351704 6.0E-06 CTTGGCTAAAGGTCA 15 V_SPIC_01_M02042 TRANSFAC - 44351961 44351970 4.0E-06 ACAGGAAGTA 10 V_BACH1_01_M00495 TRANSFAC + 44353910 44353924 7.0E-06 GGCATGAGTCACCAC 15 V_SOX7_03_M02807 TRANSFAC + 44352020 44352041 6.0E-06 ATTAAAAGACAATGCATGTGAA 22 V_HELIOSA_02_M01004 TRANSFAC - 44352094 44352104 4.0E-06 ATTAGGATAAA 11 V_FLI1_02_M02073 TRANSFAC - 44351961 44351970 9.0E-06 ACAGGAAGTA 10 V_HNF4_01_B_M00411 TRANSFAC - 44353927 44353941 7.0E-06 CTGGACAAAGGCCAG 15 V_POLY_C_M00212 TRANSFAC - 44353958 44353975 2.0E-06 AAATAAAGCCATCCTCAC 18 V_IRF5_04_M02873 TRANSFAC + 44352010 44352024 6.0E-06 TTAAAAGAGAATTAA 15 V_ELF5_01_M01197 TRANSFAC - 44351961 44351971 3.0E-06 AACAGGAAGTA 11 V_JUNDM2_04_M02876 TRANSFAC + 44353909 44353924 3.0E-06 AGGCATGAGTCACCAC 16 V_AP4_Q5_M00175 TRANSFAC + 44351054 44351063 8.0E-06 AACAGCTGGT 10 V_PPARG_03_M00528 TRANSFAC + 44351688 44351704 0.0E+00 GACTTGGCTAAAGGTCA 17 V_PPARG_03_M00528 TRANSFAC - 44353928 44353944 7.0E-06 ATTCTGGACAAAGGCCA 17 V_SPIB_01_M01204 TRANSFAC - 44350470 44350486 0.0E+00 GAAAAGAGGAAGCTTCA 17 V_SPIB_01_M01204 TRANSFAC - 44351958 44351974 2.0E-06 TAAAACAGGAAGTAAGG 17 V_TEL2_Q6_M00678 TRANSFAC + 44351960 44351969 1.0E-06 TTACTTCCTG 10 V_TCF7_03_M02817 TRANSFAC - 44351873 44351889 3.0E-06 AAGACTTCAAAGGATTC 17 V_PBX1_05_M01967 TRANSFAC + 44351040 44351053 7.0E-06 CTTGAGTGACACCC 14 V_MEF2_Q6_01_M00941 TRANSFAC + 44350367 44350378 9.0E-06 TGCTATTTAAAT 12 V_CETS1P54_01_M00032 TRANSFAC - 44351961 44351970 1.0E-06 ACAGGAAGTA 10 V_HNF4A_Q6_01_M02016 TRANSFAC - 44353925 44353939 4.0E-06 GGACAAAGGCCAGGC 15 V_HNF4_DR1_Q3_M00764 TRANSFAC - 44351692 44351704 6.0E-06 TGACCTTTAGCCA 13 V_HNF4_DR1_Q3_M00764 TRANSFAC + 44353928 44353940 2.0E-06 TGGCCTTTGTCCA 13 V_AP1_01_M00517 TRANSFAC + 44353911 44353923 3.0E-06 GCATGAGTCACCA 13 V_NR1B1_Q6_M02110 TRANSFAC + 44351697 44351706 6.0E-06 AAAGGTCACT 10 V_KAISO_01_M01119 TRANSFAC + 44353170 44353179 1.0E-06 TTCCTGCTAA 10 V_GATA4_Q3_M00632 TRANSFAC + 44353902 44353913 6.0E-06 AGATTACAGGCA 12 V_ELF1_Q6_M00746 TRANSFAC - 44350474 44350485 5.0E-06 AAAAGAGGAAGC 12 V_ELF1_Q6_M00746 TRANSFAC - 44351962 44351973 1.0E-06 AAAACAGGAAGT 12 V_POU6F1_02_M01462 TRANSFAC + 44352117 44352133 4.0E-06 CCAGATAATGAGTTACT 17 V_GABPBETA_Q3_M01876 TRANSFAC - 44351960 44351970 4.0E-06 ACAGGAAGTAA 11 V_EHF_06_M02745 TRANSFAC - 44351960 44351974 4.0E-06 TAAAACAGGAAGTAA 15 V_DR1_Q3_M00762 TRANSFAC + 44351692 44351704 3.0E-06 TGGCTAAAGGTCA 13 V_DR1_Q3_M00762 TRANSFAC - 44353928 44353940 4.0E-06 TGGACAAAGGCCA 13 V_HDX_01_M01333 TRANSFAC - 44351779 44351795 4.0E-06 AACTTAAAATCATGCAA 17 V_HNF4_Q6_01_M01031 TRANSFAC + 44351692 44351705 9.0E-06 TGGCTAAAGGTCAC 14 V_HNF4_Q6_01_M01031 TRANSFAC - 44353927 44353940 8.0E-06 TGGACAAAGGCCAG 14 V_ERR1_Q2_M00511 TRANSFAC + 44351693 44351706 6.0E-06 GGCTAAAGGTCACT 14 V_NFY_01_M00287 TRANSFAC + 44351254 44351269 5.0E-06 AAGGACCAATGAGCGA 16 V_TCF4_Q5_M00671 TRANSFAC + 44351877 44351884 1.0E-05 CCTTTGAA 8 V_NRF1_Q6_M00652 TRANSFAC + 44351196 44351205 8.0E-06 CGCTTGCGCA 10 V_PBX1_03_M01017 TRANSFAC + 44353082 44353093 5.0E-06 AAATCAAACAAA 12 V_ETS1_B_M00339 TRANSFAC - 44351956 44351970 4.0E-06 ACAGGAAGTAAGGCA 15 V_LEF1TCF1_Q4_M00978 TRANSFAC + 44351877 44351887 4.0E-06 CCTTTGAAGTC 11 V_RARA_03_M02787 TRANSFAC + 44351693 44351708 9.0E-06 GGCTAAAGGTCACTCG 16 V_CETS1_02_M02063 TRANSFAC - 44351961 44351970 9.0E-06 ACAGGAAGTA 10 V_GATA2_03_M00349 TRANSFAC - 44351063 44351072 9.0E-06 AGAGATCAGA 10 V_POU6F1_03_M01479 TRANSFAC + 44352117 44352133 3.0E-06 CCAGATAATGAGTTACT 17 V_ERR1_Q2_01_M02093 TRANSFAC + 44351697 44351707 6.0E-06 AAAGGTCACTC 11 V_NFE2_Q6_M02104 TRANSFAC + 44353912 44353927 2.0E-06 CATGAGTCACCACGCC 16 V_FOXO1_04_M01969 TRANSFAC + 44353052 44353071 0.0E+00 GCAAAGAACAACATAGTGAC 20 V_SRY_05_M02917 TRANSFAC + 44352021 44352037 7.0E-06 TTAAAAGACAATGCATG 17 V_MEF2A_05_M01301 TRANSFAC + 44350367 44350378 7.0E-06 TGCTATTTAAAT 12 V_ELK1_03_M01163 TRANSFAC - 44351961 44351971 4.0E-06 AACAGGAAGTA 11 V_SOX5_04_M02910 TRANSFAC + 44352102 44352116 1.0E-05 AATCTTAAATAAGGG 15 V_SMAD1_01_M01590 TRANSFAC + 44350417 44350428 5.0E-06 CAGAAGAAAAGA 12 V_SMAD1_01_M01590 TRANSFAC - 44350480 44350491 2.0E-06 AATAAGAAAAGA 12 PPARG_RXRA_MA0065.2 JASPAR + 44351690 44351704 6.0E-06 CTTGGCTAAAGGTCA 15 V_SPI1_02_M02043 TRANSFAC - 44351961 44351970 4.0E-06 ACAGGAAGTA 10 V_NF1_Q6_M00193 TRANSFAC - 44353140 44353157 8.0E-06 ATTTGGCACGAATCATGC 18 V_NANOG_02_M01247 TRANSFAC - 44350476 44350495 2.0E-06 ACAGAATAAGAAAAGAGGAA 20 V_NANOG_02_M01247 TRANSFAC + 44352020 44352039 4.0E-06 ATTAAAAGACAATGCATGTG 20 V_OCT4_01_M01125 TRANSFAC + 44350370 44350384 6.0E-06 TATTTAAATGGAAAG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.