Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FSCN2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25794 fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) chr17 + 79490416 - 79495916 79495416 Transcription Factor Binding Sites   Download all TFBS in the FSCN2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX21_TBX_full_dimeric_16_1 SELEX - 79490896 79490911 1.0E-05 GGTGTGAGCTGGCACA 16 Klf4_MA0039.2 JASPAR - 79493021 79493030 5.0E-06 TGGGTGGGGC 10 POU4F3_POU_DBD_monomeric_16_1 SELEX + 79490460 79490475 7.0E-06 ATGAAAAAATCATGAG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 79490955 79490970 9.0E-06 TGCTGCCATGGTGACC 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 79490459 79490475 8.0E-06 CTCATGATTTTTTCATG 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 79490955 79490970 8.0E-06 GGTCACCATGGCAGCA 16 Hic1_C2H2_DBD_dimeric_18_1 SELEX + 79490897 79490914 5.0E-06 GTGCCAGCTCACACCACC 18 V_GKLF_02_M01588 TRANSFAC + 79493021 79493032 5.0E-06 GCCCCACCCAAC 12 V_GM497_04_M02864 TRANSFAC + 79490877 79490892 2.0E-06 AGCTGCACACACGCAG 16 V_NFE4_Q5_M02105 TRANSFAC + 79492977 79492988 9.0E-06 CACCCTCCCCTG 12 V_REX1_03_M01744 TRANSFAC - 79493061 79493072 8.0E-06 ATGATGGCGGCT 12 V_YY1_03_M02044 TRANSFAC + 79493062 79493073 9.0E-06 GCCGCCATCATT 12 V_CIZ_01_M00734 TRANSFAC + 79490462 79490470 2.0E-06 GAAAAAATC 9 V_NFYC_Q5_M02107 TRANSFAC + 79493200 79493213 8.0E-06 GTGCCAATCAGAGG 14 V_SP4_04_M02914 TRANSFAC + 79490782 79490796 4.0E-06 GAAAGGCGTGGTCCT 15 V_ZID_01_M00085 TRANSFAC + 79490998 79491010 6.0E-06 GGGCTCAAGCATC 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.