Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C1orf192 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 257177 chromosome 1 open reading frame 192 chr1 - 161337173 - 161342673 161337673 Transcription Factor Binding Sites   Download all TFBS in the C1orf192 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_16_1 SELEX - 161335242 161335257 6.0E-06 AAAAATGTCTATTGTT 16 FOXA1_MA0148.1 JASPAR + 161337669 161337679 6.0E-06 TGTTTACACTC 11 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 161337853 161337866 8.0E-06 AAATTAGCTGAATA 14 SOX9_HMG_full_dimeric_16_1 SELEX + 161335242 161335257 6.0E-06 AACAATAGACATTTTT 16 SOX9_HMG_full_dimeric_16_1 SELEX - 161335242 161335257 3.0E-06 AAAAATGTCTATTGTT 16 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 161337588 161337604 0.0E+00 AAAAACAAAAGTAAACG 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 161337669 161337685 2.0E-06 AGCAACGAGTGTAAACA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 161337747 161337763 3.0E-06 GTGAATAATAATAAGCA 17 SOX8_HMG_DBD_dimeric_16_1 SELEX + 161335242 161335257 7.0E-06 AACAATAGACATTTTT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX - 161335242 161335257 1.0E-06 AAAAATGTCTATTGTT 16 FOXO3_MA0157.1 JASPAR - 161337669 161337676 7.0E-06 TGTAAACA 8 SRY_HMG_DBD_dimeric_16_1 SELEX + 161335242 161335257 0.0E+00 AACAATAGACATTTTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 161335242 161335257 0.0E+00 AAAAATGTCTATTGTT 16 ZNF232_C2H2_full_monomeric_19_1 SELEX - 161337808 161337826 6.0E-06 CTGTAAAATAAAAATGAAT 19 RFX2_RFX_DBD_dimeric_15_1 SELEX + 161337679 161337693 3.0E-06 CGTTGCTTGGCAACT 15 RFX2_RFX_DBD_dimeric_15_1 SELEX - 161337679 161337693 0.0E+00 AGTTGCCAAGCAACG 15 RFX3_RFX_DBD_dimeric_15_1 SELEX - 161337679 161337693 0.0E+00 AGTTGCCAAGCAACG 15 SOX7_HMG_full_dimeric_16_1 SELEX + 161335242 161335257 0.0E+00 AACAATAGACATTTTT 16 SOX7_HMG_full_dimeric_16_1 SELEX - 161335242 161335257 0.0E+00 AAAAATGTCTATTGTT 16 RFX4_RFX_DBD_dimeric_15_1 SELEX - 161337679 161337693 0.0E+00 AGTTGCCAAGCAACG 15 Pou5f1_MA0142.1 JASPAR - 161337583 161337597 3.0E-06 TTTTGTTTTTCAGAT 15 SOX21_HMG_DBD_dimeric_16_1 SELEX + 161335242 161335257 1.0E-06 AACAATAGACATTTTT 16 SOX21_HMG_DBD_dimeric_16_1 SELEX - 161335242 161335257 0.0E+00 AAAAATGTCTATTGTT 16 NR3C1_MA0113.1 JASPAR - 161335112 161335129 9.0E-06 CAGTAGAAAATGATCTAA 18 CPEB1_RRM_full_monomeric_8_1 SELEX - 161337813 161337820 4.0E-06 AATAAAAA 8 Sox2_MA0143.1 JASPAR - 161337584 161337598 1.0E-06 CTTTTGTTTTTCAGA 15 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 161337588 161337600 7.0E-06 AAAAACAAAAGTA 13 HNF1A_MA0046.1 JASPAR - 161337504 161337517 4.0E-06 AGATAATATTTTAC 14 V_FOXP1_01_M00987 TRANSFAC - 161337582 161337601 2.0E-06 TTACTTTTGTTTTTCAGATT 20 V_HNF3B_01_M00131 TRANSFAC - 161337595 161337609 5.0E-06 TTTAACGTTTACTTT 15 V_DBX1_01_M01483 TRANSFAC - 161337810 161337826 8.0E-06 CTGTAAAATAAAAATGA 17 V_TCF3_01_M01594 TRANSFAC - 161337586 161337598 1.0E-06 CTTTTGTTTTTCA 13 V_GATA1_Q6_M02004 TRANSFAC + 161336299 161336313 9.0E-06 GAGAAAGATAAGTAG 15 V_FOXO3_02_M02270 TRANSFAC - 161337669 161337676 7.0E-06 TGTAAACA 8 V_SRY_07_M02813 TRANSFAC - 161337748 161337763 2.0E-06 GTGAATAATAATAAGC 16 V_SOX30_03_M02804 TRANSFAC + 161335238 161335253 1.0E-05 GCATAACAATAGACAT 16 V_POU5F1_02_M02245 TRANSFAC - 161337583 161337597 3.0E-06 TTTTGTTTTTCAGAT 15 V_HOXA13_02_M01297 TRANSFAC - 161337813 161337821 4.0E-06 AAATAAAAA 9 V_ZTA_Q2_M00711 TRANSFAC - 161337838 161337850 2.0E-06 TCACATTTACTCA 13 V_IRF_Q6_01_M00972 TRANSFAC - 161337737 161337747 1.0E-05 AGAAGAGAAAG 11 V_SRY_02_M00160 TRANSFAC + 161337588 161337599 3.0E-06 AAAAACAAAAGT 12 V_IRF2_Q6_M01882 TRANSFAC + 161337586 161337601 6.0E-06 TGAAAAACAAAAGTAA 16 V_IRF2_Q6_M01882 TRANSFAC - 161337804 161337819 3.0E-06 ATAAAAATGAATCTAA 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 161337538 161337550 1.0E-06 CTGATCTTTGAAC 13 V_FOXO3A_Q1_M01137 TRANSFAC - 161337785 161337796 6.0E-06 AGAAAACAAATG 12 V_HNF3_Q6_01_M01012 TRANSFAC - 161337592 161337609 5.0E-06 TTTAACGTTTACTTTTGT 18 V_SOX21_03_M02803 TRANSFAC - 161337748 161337763 7.0E-06 GTGAATAATAATAAGC 16 V_NR3C1_01_M02219 TRANSFAC - 161335112 161335129 9.0E-06 CAGTAGAAAATGATCTAA 18 V_TCFAP2E_04_M02926 TRANSFAC - 161337874 161337887 5.0E-06 TGCCAGAAAAAAAG 14 V_ETS_Q4_M00771 TRANSFAC + 161337758 161337769 1.0E-05 ATTCACTTCCTT 12 V_SOX7_03_M02807 TRANSFAC + 161335235 161335256 1.0E-06 GTGGCATAACAATAGACATTTT 22 V_SOX7_03_M02807 TRANSFAC + 161337584 161337605 5.0E-06 TCTGAAAAACAAAAGTAAACGT 22 V_FOXA2_02_M02853 TRANSFAC - 161337746 161337760 8.0E-06 AATAATAATAAGCAG 15 V_ZFP105_03_M02827 TRANSFAC - 161337809 161337823 4.0E-06 TAAAATAAAAATGAA 15 V_ZFP105_03_M02827 TRANSFAC - 161337810 161337824 8.0E-06 GTAAAATAAAAATGA 15 V_FOXO1_02_M00474 TRANSFAC + 161337665 161337678 4.0E-06 GTGCTGTTTACACT 14 V_GATA3_05_M02859 TRANSFAC - 161337571 161337592 1.0E-06 TTTTTCAGATTCTATCTTTGGA 22 V_RFX1_01_M00280 TRANSFAC + 161337678 161337694 5.0E-06 TCGTTGCTTGGCAACTG 17 V_RFX1_01_M00280 TRANSFAC - 161337678 161337694 0.0E+00 CAGTTGCCAAGCAACGA 17 V_ZBP89_Q4_M01816 TRANSFAC + 161335094 161335103 4.0E-06 CCCTCCCCCA 10 V_HNF3A_01_M01261 TRANSFAC - 161337668 161337677 9.0E-06 GTGTAAACAG 10 V_OCT1_05_M00161 TRANSFAC + 161336280 161336293 3.0E-06 AGCCTTTTCATACT 14 V_IRF_Q6_M00772 TRANSFAC + 161337803 161337817 4.0E-06 CTTAGATTCATTTTT 15 V_EVI1_Q3_M02002 TRANSFAC + 161336199 161336207 4.0E-06 TATCTTGTA 9 V_HNF4A_Q6_01_M02016 TRANSFAC + 161337538 161337552 6.0E-06 GTTCAAAGATCAGAA 15 V_ISGF3G_03_M02771 TRANSFAC + 161337587 161337601 6.0E-06 GAAAAACAAAAGTAA 15 V_ISGF3G_03_M02771 TRANSFAC - 161337804 161337818 6.0E-06 TAAAAATGAATCTAA 15 V_OCT4_02_M01124 TRANSFAC - 161337582 161337596 3.0E-06 TTTGTTTTTCAGATT 15 V_SOX11_03_M02795 TRANSFAC + 161337586 161337602 3.0E-06 TGAAAAACAAAAGTAAA 17 V_FOXO1_Q5_M01216 TRANSFAC + 161337588 161337596 1.0E-06 AAAAACAAA 9 V_FOXO1_Q5_M01216 TRANSFAC - 161337787 161337795 5.0E-06 GAAAACAAA 9 V_EVI1_06_M00011 TRANSFAC - 161336198 161336206 4.0E-06 ACAAGATAG 9 V_HBP1_04_M02866 TRANSFAC - 161337612 161337628 8.0E-06 AGTTCCCATTCTCCATT 17 V_SOX15_03_M02799 TRANSFAC + 161335237 161335253 3.0E-06 GGCATAACAATAGACAT 17 V_HNF1_01_M00132 TRANSFAC - 161337503 161337517 9.0E-06 AGATAATATTTTACC 15 V_AP1FJ_Q2_M00172 TRANSFAC - 161336407 161336417 4.0E-06 AGTGACTTAAA 11 V_GATA3_02_M00350 TRANSFAC - 161337510 161337519 3.0E-06 TGAGATAATA 10 V_GATA6_01_M00462 TRANSFAC + 161336302 161336311 1.0E-06 AAAGATAAGT 10 V_PLZF_02_M01075 TRANSFAC + 161337493 161337521 4.0E-06 TCCCTGAGGAGGTAAAATATTATCTCACT 29 V_SOX2_01_M02246 TRANSFAC - 161337584 161337598 1.0E-06 CTTTTGTTTTTCAGA 15 V_ZFP281_04_M02831 TRANSFAC + 161335091 161335105 2.0E-06 CCACCCTCCCCCACC 15 V_GATA2_03_M00349 TRANSFAC - 161337510 161337519 7.0E-06 TGAGATAATA 10 V_SRF_06_M02916 TRANSFAC + 161337585 161337601 4.0E-06 CTGAAAAACAAAAGTAA 17 V_SRF_06_M02916 TRANSFAC - 161337810 161337826 3.0E-06 CTGTAAAATAAAAATGA 17 V_FOXJ2_01_M00422 TRANSFAC + 161337592 161337609 7.0E-06 ACAAAAGTAAACGTTAAA 18 V_EFC_Q6_M00626 TRANSFAC + 161337679 161337692 2.0E-06 CGTTGCTTGGCAAC 14 V_SOX2_Q6_M01272 TRANSFAC - 161335238 161335253 1.0E-06 ATGTCTATTGTTATGC 16 V_SOX2_Q6_M01272 TRANSFAC - 161337587 161337602 1.0E-06 TTTACTTTTGTTTTTC 16 V_IRF1_01_M00062 TRANSFAC + 161337587 161337599 3.0E-06 GAAAAACAAAAGT 13 V_PIT1_Q6_M00802 TRANSFAC + 161337807 161337824 2.0E-06 GATTCATTTTTATTTTAC 18 V_MEF2A_05_M01301 TRANSFAC + 161337748 161337759 8.0E-06 GCTTATTATTAT 12 V_HNF4_01_M00134 TRANSFAC + 161337534 161337552 5.0E-06 ATCTGTTCAAAGATCAGAA 19 V_HNF1A_01_M02162 TRANSFAC - 161337504 161337517 4.0E-06 AGATAATATTTTAC 14 V_MIF1_01_M00279 TRANSFAC + 161337678 161337695 0.0E+00 TCGTTGCTTGGCAACTGC 18 V_PAX4_04_M00380 TRANSFAC + 161335068 161335097 9.0E-06 AAAGTTAAATTTGATTTCTCTAACCACCCT 30 V_SMAD1_01_M01590 TRANSFAC + 161337588 161337599 2.0E-06 AAAAACAAAAGT 12 V_SOX14_03_M02798 TRANSFAC + 161337748 161337763 4.0E-06 GCTTATTATTATTCAC 16 V_SOX14_03_M02798 TRANSFAC - 161337748 161337763 0.0E+00 GTGAATAATAATAAGC 16 V_NANOG_02_M01247 TRANSFAC + 161335235 161335254 1.0E-06 GTGGCATAACAATAGACATT 20 V_NANOG_02_M01247 TRANSFAC + 161337584 161337603 0.0E+00 TCTGAAAAACAAAAGTAAAC 20 V_OCT4_01_M01125 TRANSFAC - 161337583 161337597 4.0E-06 TTTTGTTTTTCAGAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.