Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF683 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 257101 zinc finger protein 683 chr1 - 26698766 - 26704266 26699266 Transcription Factor Binding Sites   Download all TFBS in the ZNF683 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 26704134 26704151 7.0E-06 ATCTTAAATATATACAAT 18 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 26703478 26703488 5.0E-06 AATGACTCACT 11 CTCF_MA0139.1 JASPAR - 26700466 26700484 7.0E-06 TGGCCAAGAGATGGCAGAG 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 26700396 26700404 5.0E-06 ATAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 26700395 26700404 4.0E-06 ATAATAAAAT 10 Foxa2_MA0047.2 JASPAR - 26700285 26700296 2.0E-06 TATTTACTCTGT 12 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 26700395 26700404 4.0E-06 ATAATAAAAT 10 Tp53_p53l_DBD_dimeric_18_1 SELEX + 26698764 26698781 2.0E-06 ACATGTTTGTGAGCATCT 18 TBR1_TBX_DBD_monomeric_10_1 SELEX + 26701772 26701781 7.0E-06 AAGTGTGAAT 10 ZNF713_C2H2_full_monomeric_17_1 SELEX + 26703452 26703468 8.0E-06 AAGAAAACTGACACTCA 17 FOXA1_MA0148.1 JASPAR - 26700286 26700296 5.0E-06 TATTTACTCTG 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 26700397 26700408 2.0E-06 GCTAATAATAAA 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 26701730 26701741 2.0E-06 GTACATGACATT 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 26701699 26701707 3.0E-06 TATGTAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 26701699 26701707 4.0E-06 TATGTAAAT 9 EWSR1-FLI1_MA0149.1 JASPAR - 26701812 26701829 8.0E-06 GGAGATGAGGCAGGAAAA 18 ZNF232_C2H2_full_monomeric_19_1 SELEX + 26701693 26701711 6.0E-06 ACGCCCTATGTAAATGAAG 19 POU1F1_POU_DBD_monomeric_14_1 SELEX + 26701697 26701710 7.0E-06 CCTATGTAAATGAA 14 SOX7_HMG_full_dimeric_17_2 SELEX + 26703422 26703438 6.0E-06 GATGAATGCCATTATTC 17 SOX7_HMG_full_dimeric_17_2 SELEX - 26703422 26703438 4.0E-06 GAATAATGGCATTCATC 17 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX + 26698722 26698734 8.0E-06 AGCCCCTAGGGCT 13 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 26700397 26700408 1.0E-06 GCTAATAATAAA 12 SOX15_HMG_full_dimeric_15_3 SELEX + 26703423 26703437 3.0E-06 ATGAATGCCATTATT 15 SOX15_HMG_full_dimeric_15_3 SELEX - 26703423 26703437 8.0E-06 AATAATGGCATTCAT 15 POU3F4_POU_DBD_monomeric_9_1 SELEX + 26701699 26701707 4.0E-06 TATGTAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 26701699 26701707 5.0E-06 TATGTAAAT 9 Klf4_MA0039.2 JASPAR + 26703508 26703517 1.0E-05 TGGGCGTGGC 10 MEF2B_MADS_full_dimeric_12_1 SELEX - 26700397 26700408 2.0E-06 GCTAATAATAAA 12 ETV2_ETS_DBD_monomeric_11_1 SELEX - 26701754 26701764 9.0E-06 GACAGGAAATA 11 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 26700507 26700522 1.0E-05 AGCCACCCCCTCATTT 16 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 26700396 26700405 1.0E-06 AATAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 26700396 26700404 3.0E-06 ATAATAAAA 9 Foxq1_MA0040.1 JASPAR - 26700349 26700359 8.0E-06 TAAAGTTTATG 11 MEF2A_MA0052.1 JASPAR + 26700398 26700407 9.0E-06 TTATTATTAG 10 SOX2_HMG_full_dimeric_15_1 SELEX - 26703423 26703437 8.0E-06 AATAATGGCATTCAT 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 26700395 26700405 5.0E-06 AATAATAAAAT 11 SOX14_HMG_DBD_dimeric_15_1 SELEX - 26703423 26703437 5.0E-06 AATAATGGCATTCAT 15 Gata1_MA0035.2 JASPAR + 26703466 26703476 2.0E-06 TCAGATAAGGA 11 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 26698722 26698734 4.0E-06 AGCCCCTAGGGCT 13 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 26700395 26700404 9.0E-06 ATAATAAAAT 10 TBX2_TBX_full_monomeric_11_1 SELEX + 26697264 26697274 9.0E-06 AAGGTGTTACA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX + 26701698 26701709 9.0E-06 CTATGTAAATGA 12 FEV_MA0156.1 JASPAR - 26701755 26701762 1.0E-05 CAGGAAAT 8 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 26698722 26698734 4.0E-06 AGCCCCTAGGGCT 13 JDP2_bZIP_full_dimeric_9_1 SELEX - 26698735 26698743 1.0E-05 ATGAGTCAC 9 JDP2_bZIP_full_dimeric_9_1 SELEX + 26703479 26703487 7.0E-06 ATGACTCAC 9 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 26697259 26697274 5.0E-06 GCAGGAAGGTGTTACA 16 SOX18_HMG_full_dimeric_15_3 SELEX + 26703423 26703437 6.0E-06 ATGAATGCCATTATT 15 SOX18_HMG_full_dimeric_15_3 SELEX - 26703423 26703437 2.0E-06 AATAATGGCATTCAT 15 TBX20_TBX_DBD_monomeric_15_1 SELEX + 26701768 26701782 7.0E-06 GCTGAAGTGTGAATT 15 TFAP2A_MA0003.1 JASPAR - 26698725 26698733 8.0E-06 GCCCTAGGG 9 Sox3_HMG_DBD_dimeric_17_3 SELEX + 26703422 26703438 5.0E-06 GATGAATGCCATTATTC 17 Sox3_HMG_DBD_dimeric_17_3 SELEX - 26703422 26703438 5.0E-06 GAATAATGGCATTCATC 17 POU3F2_POU_DBD_monomeric_12_1 SELEX + 26701698 26701709 7.0E-06 CTATGTAAATGA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 26700395 26700405 3.0E-06 AATAATAAAAT 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 26700396 26700404 3.0E-06 ATAATAAAA 9 Sox1_HMG_DBD_dimeric_15_2 SELEX + 26703423 26703437 9.0E-06 ATGAATGCCATTATT 15 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 26700396 26700404 3.0E-06 ATAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 26700395 26700405 2.0E-06 AATAATAAAAT 11 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 26698814 26698825 5.0E-06 CTACATGGAAAA 12 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 26701730 26701741 3.0E-06 GTACATGACATT 12 V_AP2ALPHA_01_M00469 TRANSFAC - 26698725 26698733 8.0E-06 GCCCTAGGG 9 V_DMRT4_01_M01149 TRANSFAC + 26701722 26701734 2.0E-06 AAAGTTACAATGT 13 V_GEN_INI_B_M00315 TRANSFAC + 26700515 26700522 1.0E-05 CCTCATTT 8 V_XVENT1_01_M00445 TRANSFAC + 26701806 26701818 5.0E-06 CCCCTATTTTCCT 13 V_GATA1_Q6_M02004 TRANSFAC + 26703463 26703477 7.0E-06 CACTCAGATAAGGAA 15 V_NRSF_Q4_M01028 TRANSFAC - 26698675 26698693 3.0E-06 CCCCAGCCCATGGTGCACA 19 V_ETS_B_M00340 TRANSFAC - 26701751 26701764 2.0E-06 GACAGGAAATAGCT 14 V_STAT_Q6_M00777 TRANSFAC - 26698647 26698659 7.0E-06 GTATATTCTGGGA 13 V_ESE1_01_M01977 TRANSFAC - 26701754 26701763 8.0E-06 ACAGGAAATA 10 V_OCT1_Q5_01_M00930 TRANSFAC - 26701699 26701709 2.0E-06 TCATTTACATA 11 V_MEF2_02_M00231 TRANSFAC - 26700393 26700414 2.0E-06 TGAGCTGCTAATAATAAAATCC 22 V_EOMES_03_M02747 TRANSFAC + 26697261 26697277 6.0E-06 AGGAAGGTGTTACATTT 17 V_TBR2_01_M01774 TRANSFAC + 26701772 26701780 1.0E-05 AAGTGTGAA 9 V_NFAT3_Q3_M01734 TRANSFAC - 26703473 26703482 3.0E-06 TCATTTTCCT 10 V_POU2F3_01_M01476 TRANSFAC + 26701696 26701711 9.0E-06 CCCTATGTAAATGAAG 16 V_SOX11_04_M02899 TRANSFAC - 26704141 26704154 7.0E-06 AAAATTGTATATAT 14 V_HNF3_Q6_01_M01012 TRANSFAC - 26700284 26700301 4.0E-06 GTGGCTATTTACTCTGTT 18 V_FOXJ1_03_M02750 TRANSFAC + 26704140 26704155 1.0E-05 AATATATACAATTTTA 16 V_GATA_C_M00203 TRANSFAC + 26703468 26703478 3.0E-06 AGATAAGGAAA 11 V_GKLF_02_M01588 TRANSFAC - 26703506 26703517 1.0E-06 GCCACGCCCAGC 12 V_HOXD13_01_M01404 TRANSFAC - 26700392 26700407 2.0E-06 CTAATAATAAAATCCA 16 V_AP1_Q6_M00174 TRANSFAC + 26703478 26703488 3.0E-06 AATGACTCACT 11 V_ETS_Q4_M00771 TRANSFAC + 26701751 26701762 9.0E-06 AGCTATTTCCTG 12 V_BACH1_01_M00495 TRANSFAC - 26698732 26698746 4.0E-06 AGGATGAGTCACAGC 15 V_BACH1_01_M00495 TRANSFAC - 26703476 26703490 9.0E-06 TAAGTGAGTCATTTT 15 V_ZFP128_03_M02828 TRANSFAC - 26701686 26701702 1.0E-06 CATAGGGCGTACCACAA 17 V_GEN_INI3_B_M00314 TRANSFAC + 26700515 26700522 1.0E-05 CCTCATTT 8 V_HELIOSA_02_M01004 TRANSFAC + 26703470 26703480 1.0E-06 ATAAGGAAAAT 11 V_IRF2_01_M00063 TRANSFAC + 26703454 26703466 6.0E-06 GAAAACTGACACT 13 V_RSRFC4_Q2_M00407 TRANSFAC - 26700394 26700410 0.0E+00 CTGCTAATAATAAAATC 17 V_HOXB9_01_M01426 TRANSFAC - 26700392 26700407 9.0E-06 CTAATAATAAAATCCA 16 V_AP1_Q4_M00188 TRANSFAC + 26703478 26703488 7.0E-06 AATGACTCACT 11 V_FOXK1_04_M02856 TRANSFAC - 26700393 26700407 5.0E-06 CTAATAATAAAATCC 15 V_EVI1_01_M00078 TRANSFAC - 26700357 26700372 5.0E-06 AGACTAAATGAGATAA 16 V_HNF1_Q6_01_M01011 TRANSFAC - 26700392 26700412 1.0E-06 AGCTGCTAATAATAAAATCCA 21 V_MEF2_03_M00232 TRANSFAC - 26700393 26700414 2.0E-06 TGAGCTGCTAATAATAAAATCC 22 V_JUNDM2_04_M02876 TRANSFAC - 26698732 26698747 2.0E-06 GAGGATGAGTCACAGC 16 V_JUNDM2_04_M02876 TRANSFAC + 26703475 26703490 9.0E-06 GAAAATGACTCACTTA 16 V_ERR1_Q3_M01841 TRANSFAC - 26701725 26701739 8.0E-06 ACATGACATTGTAAC 15 V_GATA1_09_M02254 TRANSFAC + 26703466 26703476 2.0E-06 TCAGATAAGGA 11 V_CETS1P54_01_M00032 TRANSFAC - 26701754 26701763 1.0E-05 ACAGGAAATA 10 V_AP1_Q4_01_M00926 TRANSFAC - 26703479 26703486 1.0E-05 TGAGTCAT 8 V_BRACH_01_M00150 TRANSFAC + 26697253 26697276 3.0E-06 GAGATGGCAGGAAGGTGTTACATT 24 V_TBP_06_M02814 TRANSFAC + 26704136 26704151 4.0E-06 CTTAAATATATACAAT 16 V_TBP_06_M02814 TRANSFAC - 26704136 26704151 6.0E-06 ATTGTATATATTTAAG 16 V_CTCF_02_M01259 TRANSFAC - 26700468 26700487 3.0E-06 ACATGGCCAAGAGATGGCAG 20 V_CTCF_01_M01200 TRANSFAC - 26700466 26700485 4.0E-06 ATGGCCAAGAGATGGCAGAG 20 V_TBX5_01_M01019 TRANSFAC + 26697263 26697274 2.0E-06 GAAGGTGTTACA 12 V_OCT_Q6_M00795 TRANSFAC - 26701699 26701709 1.0E-06 TCATTTACATA 11 V_HBP1_04_M02866 TRANSFAC + 26703434 26703450 1.0E-06 TATTCCCATTTTAGAGG 17 V_FAC1_01_M00456 TRANSFAC + 26700422 26700435 9.0E-06 TCACACAACAAGTA 14 V_OCT2_01_M01368 TRANSFAC + 26701696 26701711 5.0E-06 CCCTATGTAAATGAAG 16 V_FOXL1_04_M02753 TRANSFAC + 26704138 26704154 4.0E-06 TAAATATATACAATTTT 17 V_T3R_Q6_M00963 TRANSFAC - 26698783 26698791 7.0E-06 CCTGTCCTT 9 V_GEN_INI2_B_M00313 TRANSFAC + 26700515 26700522 1.0E-05 CCTCATTT 8 V_FRA1_Q5_M01267 TRANSFAC - 26703479 26703486 1.0E-05 TGAGTCAT 8 V_FOXA2_03_M02260 TRANSFAC - 26700285 26700296 2.0E-06 TATTTACTCTGT 12 V_RSRFC4_01_M00026 TRANSFAC + 26700395 26700410 1.0E-06 ATTTTATTATTAGCAG 16 V_RSRFC4_01_M00026 TRANSFAC - 26700395 26700410 5.0E-06 CTGCTAATAATAAAAT 16 V_LMO2COM_02_M00278 TRANSFAC + 26703467 26703475 3.0E-06 CAGATAAGG 9 V_ETS1_B_M00339 TRANSFAC - 26701749 26701763 6.0E-06 ACAGGAAATAGCTTC 15 V_OCT1_06_M00162 TRANSFAC + 26701067 26701080 5.0E-06 CTAAATGTGATGTC 14 V_EGR1_06_M02744 TRANSFAC + 26700508 26700521 5.0E-06 GCCACCCCCTCATT 14 V_HSF_Q6_M00641 TRANSFAC + 26698698 26698710 4.0E-06 TTCCTGGGGTTTC 13 V_DMRT2_01_M01147 TRANSFAC + 26701719 26701734 3.0E-06 AGTAAAGTTACAATGT 16 V_EWSR1FLI1_01_M02252 TRANSFAC - 26701812 26701829 8.0E-06 GGAGATGAGGCAGGAAAA 18 V_SIX6_08_M02897 TRANSFAC + 26704136 26704152 9.0E-06 CTTAAATATATACAATT 17 V_IRF1_01_M00062 TRANSFAC + 26703454 26703466 1.0E-06 GAAAACTGACACT 13 V_GATA5_03_M02756 TRANSFAC + 26703463 26703479 4.0E-06 CACTCAGATAAGGAAAA 17 V_AP2ALPHA_02_M01045 TRANSFAC - 26698722 26698736 3.0E-06 ACAGCCCTAGGGGCT 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 26700561 26700574 8.0E-06 GTTGGGGGAAGGAC 14 V_ZFP128_04_M02932 TRANSFAC + 26704136 26704149 5.0E-06 CTTAAATATATACA 14 V_ZFP128_04_M02932 TRANSFAC - 26704136 26704149 0.0E+00 TGTATATATTTAAG 14 V_FEV_01_M02269 TRANSFAC - 26701755 26701762 1.0E-05 CAGGAAAT 8 V_FOXK1_03_M02752 TRANSFAC + 26704138 26704154 5.0E-06 TAAATATATACAATTTT 17 V_DMRT5_01_M01150 TRANSFAC + 26701721 26701735 7.0E-06 TAAAGTTACAATGTC 15 V_HSF1_Q6_01_M02017 TRANSFAC - 26698646 26698659 2.0E-06 GTATATTCTGGGAC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.