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ALX3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 257 ALX homeobox 3 chr1 - 110612822 - 110618322 110613322 ALX3_homeodomain_full_dimeric_13_1 ALX3_homeodomain_full_monomeric_10_1 V_ALX3_01_M01355 V_ALX3_02_M02943 Transcription Factor Binding Sites   Download all TFBS in the ALX3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_13_2 SELEX - 110611354 110611366 9.0E-06 TAAATGGCAGTCG 13 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 110613448 110613460 8.0E-06 CCGAGGGGTTAAC 13 NHLH1_MA0048.1 JASPAR - 110610839 110610850 1.0E-06 GCGCAGCTGCGC 12 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 110611218 110611234 3.0E-06 CTAAACAAAAGAAAACG 17 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 110613777 110613791 6.0E-06 ATGTTGCCTCAGCAA 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 110613777 110613791 4.0E-06 TTGCTGAGGCAACAT 15 Pax4_MA0068.1 JASPAR + 110613774 110613803 9.0E-06 AAAATGTTGCCTCAGCAAAAAACACCTCCC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 110611409 110611422 8.0E-06 GAAAAGGGGAAGGG 14 SOX8_HMG_full_dimeric_13_1 SELEX - 110611355 110611367 7.0E-06 GTAAATGGCAGTC 13 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX - 110611160 110611169 9.0E-06 GAAAATTAAC 10 SP1_MA0079.2 JASPAR + 110613472 110613481 3.0E-06 CCCCTCCCCC 10 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 110613776 110613792 7.0E-06 AATGTTGCCTCAGCAAA 17 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 110613776 110613792 1.0E-06 TTTGCTGAGGCAACATT 17 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 110613774 110613794 1.0E-06 AAAATGTTGCCTCAGCAAAAA 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 110613774 110613794 0.0E+00 TTTTTGCTGAGGCAACATTTT 21 PRDM4_C2H2_full_monomeric_13_1 SELEX + 110611468 110611480 5.0E-06 TGTCAAGGCCACC 13 MAFG_bZIP_full_dimeric_21_1 SELEX + 110613774 110613794 0.0E+00 AAAATGTTGCCTCAGCAAAAA 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 110613774 110613794 0.0E+00 TTTTTGCTGAGGCAACATTTT 21 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 110611256 110611272 1.0E-05 CTTTCCCCCTTCTCTAG 17 MAFK_bZIP_full_monomeric_12_1 SELEX - 110613784 110613795 9.0E-06 TTTTTTGCTGAG 12 SPI1_ETS_full_monomeric_14_1 SELEX - 110611409 110611422 6.0E-06 GAAAAGGGGAAGGG 14 IRF3_IRF_full_trimeric_21_1 SELEX - 110611397 110611417 1.0E-05 GGGGAAGGGAAATTGAACAAA 21 IRF3_IRF_full_trimeric_21_1 SELEX - 110611403 110611423 5.0E-06 AGAAAAGGGGAAGGGAAATTG 21 NHLH1_bHLH_full_dimeric_10_1 SELEX + 110610840 110610849 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 110610840 110610849 2.0E-06 CGCAGCTGCG 10 V_TCF3_01_M01594 TRANSFAC + 110611219 110611231 6.0E-06 GTTTTCTTTTGTT 13 V_HMGIY_Q3_M01010 TRANSFAC + 110611158 110611172 6.0E-06 TCGTTAATTTTCTTA 15 V_BCL6_01_M01183 TRANSFAC + 110611439 110611454 4.0E-06 TTCTTTGGTTTTCTTT 16 V_HOXA13_02_M01297 TRANSFAC - 110613743 110613751 8.0E-06 AAGTAAAAC 9 V_CBF_02_M01080 TRANSFAC + 110611760 110611775 7.0E-06 CCAACTGTGGTTTTTA 16 V_SRY_02_M00160 TRANSFAC - 110611223 110611234 2.0E-06 CTAAACAAAAGA 12 V_IRF2_Q6_M01882 TRANSFAC - 110611402 110611417 7.0E-06 GGGGAAGGGAAATTGA 16 V_ATF3_Q6_01_M01863 TRANSFAC - 110613401 110613411 6.0E-06 ATTAAGTCAGA 11 V_IRF3_05_M02767 TRANSFAC - 110611444 110611457 9.0E-06 GAGAAAGAAAACCA 14 V_HNF3_Q6_01_M01012 TRANSFAC + 110611223 110611240 8.0E-06 TCTTTTGTTTAGTCTGCT 18 V_MAF_Q6_M00648 TRANSFAC - 110610927 110610942 6.0E-06 TGGTGGGAAGTGGCGG 16 V_FOXJ1_03_M02750 TRANSFAC - 110611222 110611237 6.0E-06 AGACTAAACAAAAGAA 16 V_SP1_03_M02281 TRANSFAC + 110613472 110613481 3.0E-06 CCCCTCCCCC 10 V_HEN1_01_M00068 TRANSFAC + 110610834 110610855 0.0E+00 ATGGGGCGCAGCTGCGCGCTCA 22 V_PU1_Q4_M01172 TRANSFAC + 110611403 110611421 0.0E+00 CAATTTCCCTTCCCCTTTT 19 V_TST1_01_M00133 TRANSFAC + 110612315 110612329 1.0E-06 GAGAAATAAGAATAC 15 V_XFD3_01_M00269 TRANSFAC - 110611224 110611237 1.0E-05 AGACTAAACAAAAG 14 V_NFKB_Q6_M00194 TRANSFAC + 110610512 110610525 3.0E-06 TTGGGACTCTCCTC 14 V_IRF_Q6_M00772 TRANSFAC + 110611401 110611415 9.0E-06 TTCAATTTCCCTTCC 15 V_HOXC11_01_M01329 TRANSFAC + 110611153 110611168 1.0E-05 TGAAATCGTTAATTTT 16 V_HOXC12_01_M01437 TRANSFAC + 110611153 110611169 7.0E-06 TGAAATCGTTAATTTTC 17 V_VMYB_01_M00003 TRANSFAC - 110612327 110612336 7.0E-06 AATAACTGTA 10 V_HOXA11_01_M01378 TRANSFAC + 110611153 110611168 6.0E-06 TGAAATCGTTAATTTT 16 V_SOX11_03_M02795 TRANSFAC - 110611220 110611236 1.0E-05 GACTAAACAAAAGAAAA 17 V_BLIMP1_Q6_M01066 TRANSFAC - 110611402 110611417 0.0E+00 GGGGAAGGGAAATTGA 16 V_MAF_Q6_01_M00983 TRANSFAC - 110613780 110613790 9.0E-06 TGCTGAGGCAA 11 V_ZFP691_04_M02937 TRANSFAC - 110610584 110610600 6.0E-06 CAAGAGACTCCTACTAG 17 V_TFIII_Q6_M00706 TRANSFAC - 110611242 110611250 6.0E-06 AGAGGGAGG 9 V_MTF1_06_M02882 TRANSFAC + 110612318 110612331 5.0E-06 AAATAAGAATACAG 14 V_HEN1_02_M00058 TRANSFAC + 110610834 110610855 0.0E+00 ATGGGGCGCAGCTGCGCGCTCA 22 V_HEN1_02_M00058 TRANSFAC - 110610834 110610855 0.0E+00 TGAGCGCGCAGCTGCGCCCCAT 22 V_FOXJ3_06_M02855 TRANSFAC - 110611389 110611405 2.0E-06 TTGAACAAAACAACGGA 17 V_PLAG1_01_M01778 TRANSFAC + 110614589 110614604 6.0E-06 GGGGCTTAGAAGGGGT 16 V_ZFP161_04_M02933 TRANSFAC - 110611692 110611705 0.0E+00 GCCGCGCAGTGCGG 14 V_TCF4_Q5_M00671 TRANSFAC - 110611790 110611797 1.0E-05 CCTTTGAA 8 V_ZFP281_01_M01597 TRANSFAC - 110613472 110613482 2.0E-06 GGGGGGAGGGG 11 V_OCT1_06_M00162 TRANSFAC + 110611183 110611196 6.0E-06 CTCATTTTGATATA 14 V_DMRT2_01_M01147 TRANSFAC + 110611185 110611200 6.0E-06 CATTTTGATATATTCT 16 V_VDR_Q3_M00444 TRANSFAC - 110613476 110613490 4.0E-06 GGGTGAATGGGGGGA 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 110611765 110611772 1.0E-05 TGTGGTTT 8 V_FOXO1_01_M00473 TRANSFAC - 110611226 110611235 9.0E-06 ACTAAACAAA 10 V_CMAF_01_M01070 TRANSFAC - 110613777 110613795 1.0E-06 TTTTTTGCTGAGGCAACAT 19 V_DMRT1_01_M01146 TRANSFAC - 110613771 110613785 8.0E-06 AGGCAACATTTTGTC 15 V_SMAD1_01_M01590 TRANSFAC - 110611223 110611234 4.0E-06 CTAAACAAAAGA 12 V_NANOG_02_M01247 TRANSFAC - 110611219 110611238 9.0E-06 CAGACTAAACAAAAGAAAAC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.