Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CDRT15L2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
256223 CMT1A duplicated region transcript 15-like 2 chr17 +20478036 - 20483536 20483036

Transcription Factor Binding Sites

 
Download all TFBS in the CDRT15L2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
HSF2_HSF_DBD_trimeric_13_1 SELEX - 20478534 20478546 1.0E-05 ATCTAGAAATTTT 13
POU3F3_POU_DBD_monomeric_12_1 SELEX + 20478568 20478579 3.0E-06 ATAAATATTTTA 12
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 20478517 20478530 6.0E-06 TAAGTAAGTAATAA 14
FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 20478567 20478580 9.0E-06 TTAAAATATTTATC 14
POU6F2_POU_DBD_dimeric_16_1 SELEX + 20478516 20478531 5.0E-06 CTTATTACTTACTTAG 16
POU2F3_POU_DBD_dimeric_12_1 SELEX + 20478568 20478579 6.0E-06 ATAAATATTTTA 12
POU2F3_POU_DBD_dimeric_12_1 SELEX - 20478568 20478579 9.0E-06 TAAAATATTTAT 12
FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 20478567 20478580 8.0E-06 GATAAATATTTTAA 14
EN1_homeodomain_full_dimeric_14_1 SELEX + 20478517 20478530 1.0E-06 TTATTACTTACTTA 14
POU3F1_POU_DBD_monomeric_12_2 SELEX + 20478568 20478579 1.0E-06 ATAAATATTTTA 12
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 20478568 20478579 9.0E-06 ATAAATATTTTA 12
FOXC1_MA0032.1 JASPAR - 20478521 20478528 7.0E-06 AGTAAGTA 8
GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 20478517 20478530 5.0E-06 TTATTACTTACTTA 14
GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 20478517 20478530 6.0E-06 TAAGTAAGTAATAA 14
POU3F3_POU_DBD_dimeric_12_1 SELEX + 20478568 20478579 7.0E-06 ATAAATATTTTA 12
POU3F3_POU_DBD_dimeric_12_1 SELEX - 20478568 20478579 7.0E-06 TAAAATATTTAT 12
POU4F1_POU_DBD_monomeric_14_1 SELEX + 20478568 20478581 9.0E-06 ATAAATATTTTAAA 14
V_DBX1_01_M01483 TRANSFAC - 20478514 20478530 3.0E-06 TAAGTAAGTAATAAGAA 17
V_NFAT3_Q3_M01734 TRANSFAC - 20478530 20478539 4.0E-06 AATTTTTCCT 10
V_COMP1_01_M00057 TRANSFAC - 20478499 20478522 5.0E-06 TAATAAGAAAGAGATGAAAAAGTA 24
V_HELIOSA_02_M01004 TRANSFAC + 20478527 20478537 9.0E-06 CTTAGGAAAAA 11
V_POU3F2_01_M00463 TRANSFAC + 20478568 20478581 7.0E-06 ATAAATATTTTAAA 14
V_CEBPE_Q6_M01868 TRANSFAC + 20478533 20478546 8.0E-06 AAAAATTTCTAGAT 14
V_NFAT_Q6_M00302 TRANSFAC + 20478527 20478538 3.0E-06 CTTAGGAAAAAT 12
V_NCX_02_M01420 TRANSFAC - 20478514 20478530 4.0E-06 TAAGTAAGTAATAAGAA 17
V_MAF_Q6_01_M00983 TRANSFAC + 20478554 20478564 6.0E-06 TACTGAGTCAG 11
V_MTF1_06_M02882 TRANSFAC - 20478509 20478522 4.0E-06 TAATAAGAAAGAGA 14
V_EHF_07_M02849 TRANSFAC - 20478525 20478540 6.0E-06 AAATTTTTCCTAAGTA 16
V_GLIS2_04_M02863 TRANSFAC - 20478511 20478524 7.0E-06 AGTAATAAGAAAGA 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL