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C19orf38


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
255809 chromosome 19 open reading frame 38 chr19 +10954105 - 10959605 10959105

Transcription Factor Binding Sites

 
Download all TFBS in the C19orf38 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 10962860 10962875 4.0E-06 TGAGGTTAAGAGTTCA 16
POU3F3_POU_DBD_monomeric_12_1 SELEX - 10963060 10963071 8.0E-06 TTGAATATATAT 12
EWSR1-FLI1_MA0149.1 JASPAR + 10957339 10957356 1.0E-05 GGAATGAAAGAAGGAACA 18
Pax4_MA0068.1 JASPAR + 10958891 10958920 0.0E+00 AAAAAATTGTGAAAACCACCTAAACATCTC 30
ZNF238_C2H2_full_monomeric_13_1 SELEX + 10962912 10962924 4.0E-06 ATTACAGATGTGA 13
POU2F3_POU_DBD_dimeric_12_1 SELEX + 10963060 10963071 7.0E-06 ATATATATTCAA 12
POU2F3_POU_DBD_dimeric_12_1 SELEX - 10963060 10963071 8.0E-06 TTGAATATATAT 12
ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 10963016 10963032 1.0E-05 ATCCGCCTGGAATGTCA 17
NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 10962859 10962874 1.0E-06 GAGGTTAAGAGTTCAA 16
TEAD3_TEA_DBD_monomeric_8_1 SELEX + 10963005 10963012 1.0E-05 ACATTCCA 8
TEAD3_TEA_DBD_monomeric_8_1 SELEX + 10963018 10963025 1.0E-05 ACATTCCA 8
Hltf_MA0109.1 JASPAR - 10962947 10962956 1.0E-05 AACCTTATGT 10
ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 10958979 10958995 9.0E-06 CCTTCCCCAAACACACA 17
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 10963060 10963071 1.0E-05 ATATATATTCAA 12
SPDEF_ETS_full_putative-multimer_16_1 SELEX + 10957341 10957356 8.0E-06 AATGAAAGAAGGAACA 16
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 10962860 10962874 0.0E+00 GAGGTTAAGAGTTCA 15
POU3F3_POU_DBD_dimeric_12_1 SELEX - 10963060 10963071 7.0E-06 TTGAATATATAT 12
RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 10962859 10962874 2.0E-06 GAGGTTAAGAGTTCAA 16
RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 10962860 10962874 5.0E-06 GAGGTTAAGAGTTCA 15
V_RUSH1A_02_M01107 TRANSFAC - 10962947 10962956 1.0E-05 AACCTTATGT 10
V_HOXA9_01_M01351 TRANSFAC + 10957371 10957387 5.0E-06 ACAGACATTAAAAGGAT 17
V_MEIS1BHOXA9_02_M00421 TRANSFAC - 10957325 10957338 6.0E-06 TGACACATAAATTA 14
V_RP58_01_M00532 TRANSFAC - 10962914 10962925 7.0E-06 CTCACATCTGTA 12
V_PITX2_Q6_M02114 TRANSFAC - 10962908 10962917 1.0E-06 TGTAATCCCA 10
V_SP1_02_M01303 TRANSFAC + 10958994 10959004 5.0E-06 GGGGTGGGGAG 11
V_AP4_Q6_01_M00927 TRANSFAC - 10959209 10959217 6.0E-06 ACCAGCTGC 9
V_ZFP691_03_M02833 TRANSFAC - 10962955 10962971 8.0E-06 TAGTAAGTGCTCAGAAA 17
V_RPC155_01_M01798 TRANSFAC - 10962855 10962870 1.0E-06 TTAAGAGTTCAAGACT 16
V_PXRRXR_02_M01153 TRANSFAC - 10962860 10962867 1.0E-05 AGAGTTCA 8
V_AP1_Q4_M00188 TRANSFAC - 10962920 10962930 1.0E-05 GGTGACTCACA 11
V_MAZ_Q6_01_M02023 TRANSFAC + 10958993 10959006 1.0E-06 AGGGGTGGGGAGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 10958998 10959011 5.0E-06 TGGGGAGGGGAGAG 14
V_AP2BETA_Q3_M01858 TRANSFAC - 10959141 10959156 3.0E-06 GCTGAGGCCAGAGGGG 16
V_HNF1_Q6_01_M01011 TRANSFAC - 10959421 10959441 2.0E-06 TTCTGATATTCATAAACTTGG 21
V_TTF1_Q6_M00794 TRANSFAC + 10962870 10962881 7.0E-06 ACCTCAAGTGAT 12
V_MATH1_Q2_M01716 TRANSFAC + 10959209 10959218 3.0E-06 GCAGCTGGTG 10
V_JUNDM2_04_M02876 TRANSFAC + 10962917 10962932 8.0E-06 AGATGTGAGTCACCAT 16
V_JUNDM2_04_M02876 TRANSFAC - 10962918 10962933 1.0E-06 CATGGTGACTCACATC 16
V_GRE_C_M00205 TRANSFAC - 10963033 10963048 2.0E-06 TTTATCATCTGTCCTC 16
V_RREB1_01_M00257 TRANSFAC - 10958978 10958991 3.0E-06 CCCCAAACACACAT 14
V_HOXD9_Q2_M01834 TRANSFAC + 10957373 10957382 8.0E-06 AGACATTAAA 10
V_MTF1_06_M02882 TRANSFAC - 10959392 10959405 2.0E-06 TAAGAAGAAAAAAC 14
V_LBP9_01_M01592 TRANSFAC + 10959146 10959162 7.0E-06 CTGGCCTCAGCCGGATT 17
V_IPF1_05_M01255 TRANSFAC + 10957373 10957384 2.0E-06 AGACATTAAAAG 12
V_LUN1_01_M00480 TRANSFAC - 10962896 10962912 3.0E-06 TCCCAGCTACTCTGGAG 17
V_NKX3A_02_M01383 TRANSFAC - 10962955 10962971 4.0E-06 TAGTAAGTGCTCAGAAA 17
V_NKX61_02_M01469 TRANSFAC - 10963111 10963126 7.0E-06 TTCAAATAATGACATC 16
V_AIRE_01_M00999 TRANSFAC + 10957375 10957400 0.0E+00 ACATTAAAAGGATAGTAAGGGGATAT 26
V_BDP1_01_M01796 TRANSFAC + 10962855 10962866 9.0E-06 AGTCTTGAACTC 12
V_ASCL2_04_M02841 TRANSFAC - 10958996 10959011 8.0E-06 CTCTCCCCTCCCCACC 16
V_PITX2_Q2_M00482 TRANSFAC - 10962907 10962917 1.0E-06 TGTAATCCCAG 11
V_FOX_Q2_M00809 TRANSFAC + 10959384 10959396 8.0E-06 TAGTGTTGGTTTT 13
V_SRF_06_M02916 TRANSFAC - 10959390 10959406 6.0E-06 CTAAGAAGAAAAAACCA 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 10957339 10957356 1.0E-05 GGAATGAAAGAAGGAACA 18
V_PIT1_Q6_M00802 TRANSFAC - 10963039 10963056 2.0E-06 ATTTCATGTTTATCATCT 18
V_MAFK_04_M02880 TRANSFAC - 10958919 10958933 6.0E-06 GAAAAAAATGGATGA 15
V_PAX4_04_M00380 TRANSFAC + 10958891 10958920 5.0E-06 AAAAAATTGTGAAAACCACCTAAACATCTC 30
V_SMAD1_01_M01590 TRANSFAC - 10959393 10959404 7.0E-06 AAGAAGAAAAAA 12
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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